The gene/protein map for NC_007948 is currently unavailable.
Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91790433

Identifier: 91790433

GI number: 91790433

Start: 4884187

End: 4884693

Strand: Reverse

Name: 91790433

Synonym: Bpro_4604

Alternate gene names: NA

Gene position: 4884693-4884187 (Counterclockwise)

Preceding gene: 91790434

Following gene: 91790430

Centisome position: 93.93

GC content: 63.91

Gene sequence:

>507_bases
ATGCAGCGTCGCGCTTTACTGTCACTGACGGCTTCCGCCGCCGCCCTGAGCCTGGCTGGCTGTGGTTTTCAGCTGCGCAA
GGCGCCCGACTACGCCTTCACAACCCTGTTCAGCGGCCTTCCCGAATCATCGCCGCTGGGCGTGGAATTGCGGCGCTCGC
TGGAGTCCACCCGCAAGGTCAAGGTGATCACCGACGGCCGGCAGATCAAGGATGCGCAGGTCATTCTGGATGTGCTGGGC
GACCAGCGGGAAAAGCAGGTGCTCAGCCGCAACGCCTCCGGCCAGGTGCGCGAGTTCCAGTTGCGCATGCGTTTTCGTTT
CAAGCTGCGCACGCTGGCGGGCAAGGAGCTGATTCCGGAGACCGAGATCCTGCAGCAGCGCGACATCAGCTTCAACGAGT
CCGCCGTGCTGGCCAAGGAGGCGGAGGAGAACCTGCTTTACCGCGACATGCAAAGCGACATCGTCCAGCAGGTCCTGCGC
CGCCTGGCGGCCGTGACGGAAATCTAG

Upstream 100 bases:

>100_bases
CCGGCCAAAAAGGTCATCGTGGTGCCTGGCCGGCTGGTCAACATCGTTGTCTGAGATCACCCCAAGATAGTCCCAAGATA
ATCCCAAGACAAGGCAAACC

Downstream 100 bases:

>100_bases
GCGCTACCGGGCGCCGGCCCTTCGCACTAGCGCCGCATCAGCGTGCTCTTGCCGAACAGGCTTTCCATCAGGTCCAGTGC
CACTTCGGCCGTGCCGTTGC

Product: rare lipoprotein B

Products: NA

Alternate protein names: Lipoprotein; Lipoprotein B; Lipoprotein B Transmembrane; Lipoprotein B Transmembrane Protein; Lipoprotein B Transmembrane; Rare Lipoprotein B Family

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MQRRALLSLTASAAALSLAGCGFQLRKAPDYAFTTLFSGLPESSPLGVELRRSLESTRKVKVITDGRQIKDAQVILDVLG
DQREKQVLSRNASGQVREFQLRMRFRFKLRTLAGKELIPETEILQQRDISFNESAVLAKEAEENLLYRDMQSDIVQQVLR
RLAAVTEI

Sequences:

>Translated_168_residues
MQRRALLSLTASAAALSLAGCGFQLRKAPDYAFTTLFSGLPESSPLGVELRRSLESTRKVKVITDGRQIKDAQVILDVLG
DQREKQVLSRNASGQVREFQLRMRFRFKLRTLAGKELIPETEILQQRDISFNESAVLAKEAEENLLYRDMQSDIVQQVLR
RLAAVTEI
>Mature_168_residues
MQRRALLSLTASAAALSLAGCGFQLRKAPDYAFTTLFSGLPESSPLGVELRRSLESTRKVKVITDGRQIKDAQVILDVLG
DQREKQVLSRNASGQVREFQLRMRFRFKLRTLAGKELIPETEILQQRDISFNESAVLAKEAEENLLYRDMQSDIVQQVLR
RLAAVTEI

Specific function: Unknown

COG id: COG2980

COG function: function code M; Rare lipoprotein B

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18950; Mature: 18950

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRRALLSLTASAAALSLAGCGFQLRKAPDYAFTTLFSGLPESSPLGVELRRSLESTRKV
CCCHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCEE
KVITDGRQIKDAQVILDVLGDQREKQVLSRNASGQVREFQLRMRFRFKLRTLAGKELIPE
EEEECCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCH
TEILQQRDISFNESAVLAKEAEENLLYRDMQSDIVQQVLRRLAAVTEI
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQRRALLSLTASAAALSLAGCGFQLRKAPDYAFTTLFSGLPESSPLGVELRRSLESTRKV
CCCHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCEE
KVITDGRQIKDAQVILDVLGDQREKQVLSRNASGQVREFQLRMRFRFKLRTLAGKELIPE
EEEECCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCH
TEILQQRDISFNESAVLAKEAEENLLYRDMQSDIVQQVLRRLAAVTEI
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA