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The map label for this gene is arcB [H]

Identifier: 91790431

GI number: 91790431

Start: 4882152

End: 4883249

Strand: Direct

Name: arcB [H]

Synonym: Bpro_4602

Alternate gene names: 91790431

Gene position: 4882152-4883249 (Clockwise)

Preceding gene: 91790415

Following gene: 91790432

Centisome position: 93.88

GC content: 63.02

Gene sequence:

>1098_bases
ATGGTTGACTATATTGGCATTGCAAACATCCAGAAAATGGTGGGCGCGCTGGGCCCCGCTGTATTCATTGAGGGCCTGGC
CGCCGAAATCGAGGCCGACTACCGGCGCTGGGGGGAATTTGACAAGTCCGCCCGCCACGCCATTCATTCACCGGTGGGTG
TCATCGAGTTGATGCCGACCAGCGACGGCCAGATGTACTCCTTCAAGTATGTCAACGGTCATCCCAAAAACACCGCGCTC
GGCCTGCTCACAGTCACCGCCTTTGGTGTTCTGGCGGACGTCAAGACCGGCTACCCGCTGCTGCTGTCCGAGCTGACGGT
CACCACCGCGTTGCGCACGGCGGCCATGTCGGCGCTGGCCGCGCGCTGGATGGCACGGCCGGACAGCCGCGTCATGGCGC
TGATCGGCAATGGCGCGCAAAGCGAATTCCAGGCCATCGCGTTCCACCACATGCTGGGCATTCGGGAGATACGGCTCCAT
GACGTGGACCGCAAGGCAATGGACAAGCTGGCGCGCAACCTTCACGAACTGGGCCTGCGCGACCTGCAGGTCAGGCTGTG
CAAGTCTGCCGCCGACGCCGTGCAGGGCGCCGACGTTGTCACCACCGTCACAGCCGACAAACGCAATGCCATCATCCTGA
CCCCCGAGATGATTGCGCCCGGCATGCATCTGAACGCCGTGGGAGGCGACTGCCCGGGCAAGACCGAGTTGCACGCCGAC
ATCCTGCGGCGCACCGACGCACGCGTGATCGTGGAGTACGAGCCCCAGTCGCGCATTGAAGGCGAGATCCAGCAAATGCC
GGCCGACTTTGCGGTGACGGAGTTTGCCCAGGTACTCAGCGGTGAGGCCGCCGGCCGCGCCTCGCCGGCTGAAGTGACGA
TTTTTGACTCGGTGGGCTTCGCGCTGGAGGATTACTCGGCCCTGCGCTATTTGTATAAACTGCAGCAGGTGCAAAGCCTG
CGCCAGGAGATCGATTTGGTTCCCGATCTGGACAATCCGAAAAACCTGTTTGGCCTGTTGGCAGCCGCCCCCGGGGGCAC
AACCCAGGCGGCCCCGGGACTGGTCAAACCCTTCGCTGCCGAATTGACCTCGACATGA

Upstream 100 bases:

>100_bases
GAGGGGGCCTGAATGGGCGACATCCCCTGTTCCCGCCCGGGAAGCCGCCCGCCATCGACACCGCACAGGCGACACCGTGC
AGACACAAGAAAGACAGACC

Downstream 100 bases:

>100_bases
CCAGACGCATCCGGCTGATTGGCGCCCCGACCGACATTGGCGCCAGTACCCGAGGCTCGTCCATGGGCCCAGAAGCGCTG
CGCGTCGCGGGACTGCAGGC

Product: ornithine cyclodeaminase

Products: NA

Alternate protein names: OCD [H]

Number of amino acids: Translated: 365; Mature: 365

Protein sequence:

>365_residues
MVDYIGIANIQKMVGALGPAVFIEGLAAEIEADYRRWGEFDKSARHAIHSPVGVIELMPTSDGQMYSFKYVNGHPKNTAL
GLLTVTAFGVLADVKTGYPLLLSELTVTTALRTAAMSALAARWMARPDSRVMALIGNGAQSEFQAIAFHHMLGIREIRLH
DVDRKAMDKLARNLHELGLRDLQVRLCKSAADAVQGADVVTTVTADKRNAIILTPEMIAPGMHLNAVGGDCPGKTELHAD
ILRRTDARVIVEYEPQSRIEGEIQQMPADFAVTEFAQVLSGEAAGRASPAEVTIFDSVGFALEDYSALRYLYKLQQVQSL
RQEIDLVPDLDNPKNLFGLLAAAPGGTTQAAPGLVKPFAAELTST

Sequences:

>Translated_365_residues
MVDYIGIANIQKMVGALGPAVFIEGLAAEIEADYRRWGEFDKSARHAIHSPVGVIELMPTSDGQMYSFKYVNGHPKNTAL
GLLTVTAFGVLADVKTGYPLLLSELTVTTALRTAAMSALAARWMARPDSRVMALIGNGAQSEFQAIAFHHMLGIREIRLH
DVDRKAMDKLARNLHELGLRDLQVRLCKSAADAVQGADVVTTVTADKRNAIILTPEMIAPGMHLNAVGGDCPGKTELHAD
ILRRTDARVIVEYEPQSRIEGEIQQMPADFAVTEFAQVLSGEAAGRASPAEVTIFDSVGFALEDYSALRYLYKLQQVQSL
RQEIDLVPDLDNPKNLFGLLAAAPGGTTQAAPGLVKPFAAELTST
>Mature_365_residues
MVDYIGIANIQKMVGALGPAVFIEGLAAEIEADYRRWGEFDKSARHAIHSPVGVIELMPTSDGQMYSFKYVNGHPKNTAL
GLLTVTAFGVLADVKTGYPLLLSELTVTTALRTAAMSALAARWMARPDSRVMALIGNGAQSEFQAIAFHHMLGIREIRLH
DVDRKAMDKLARNLHELGLRDLQVRLCKSAADAVQGADVVTTVTADKRNAIILTPEMIAPGMHLNAVGGDCPGKTELHAD
ILRRTDARVIVEYEPQSRIEGEIQQMPADFAVTEFAQVLSGEAAGRASPAEVTIFDSVGFALEDYSALRYLYKLQQVQSL
RQEIDLVPDLDNPKNLFGLLAAAPGGTTQAAPGLVKPFAAELTST

Specific function: Unknown

COG id: COG2423

COG function: function code E; Predicted ornithine cyclodeaminase, mu-crystallin homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ornithine cyclodeaminase family [H]

Homologues:

Organism=Homo sapiens, GI4503065, Length=224, Percent_Identity=30.3571428571429, Blast_Score=92, Evalue=5e-19,
Organism=Homo sapiens, GI62241008, Length=224, Percent_Identity=30.3571428571429, Blast_Score=92, Evalue=6e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR003462 [H]

Pfam domain/function: PF02423 OCD_Mu_crystall [H]

EC number: =4.3.1.12 [H]

Molecular weight: Translated: 39451; Mature: 39451

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDYIGIANIQKMVGALGPAVFIEGLAAEIEADYRRWGEFDKSARHAIHSPVGVIELMPT
CCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEEEC
SDGQMYSFKYVNGHPKNTALGLLTVTAFGVLADVKTGYPLLLSELTVTTALRTAAMSALA
CCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
ARWMARPDSRVMALIGNGAQSEFQAIAFHHMLGIREIRLHDVDRKAMDKLARNLHELGLR
HHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHH
DLQVRLCKSAADAVQGADVVTTVTADKRNAIILTPEMIAPGMHLNAVGGDCPGKTELHAD
HHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEHHHHCCCCEEECCCCCCCCCCHHHHH
ILRRTDARVIVEYEPQSRIEGEIQQMPADFAVTEFAQVLSGEAAGRASPAEVTIFDSVGF
HHHCCCCEEEEEECCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCC
ALEDYSALRYLYKLQQVQSLRQEIDLVPDLDNPKNLFGLLAAAPGGTTQAAPGLVKPFAA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHH
ELTST
HHCCC
>Mature Secondary Structure
MVDYIGIANIQKMVGALGPAVFIEGLAAEIEADYRRWGEFDKSARHAIHSPVGVIELMPT
CCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEEEC
SDGQMYSFKYVNGHPKNTALGLLTVTAFGVLADVKTGYPLLLSELTVTTALRTAAMSALA
CCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
ARWMARPDSRVMALIGNGAQSEFQAIAFHHMLGIREIRLHDVDRKAMDKLARNLHELGLR
HHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHH
DLQVRLCKSAADAVQGADVVTTVTADKRNAIILTPEMIAPGMHLNAVGGDCPGKTELHAD
HHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEHHHHCCCCEEECCCCCCCCCCHHHHH
ILRRTDARVIVEYEPQSRIEGEIQQMPADFAVTEFAQVLSGEAAGRASPAEVTIFDSVGF
HHHCCCCEEEEEECCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCC
ALEDYSALRYLYKLQQVQSLRQEIDLVPDLDNPKNLFGLLAAAPGGTTQAAPGLVKPFAA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHH
ELTST
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3281832; 8045881; 11743193; 11743194 [H]