| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is narK [H]
Identifier: 91790426
GI number: 91790426
Start: 4873917
End: 4875179
Strand: Reverse
Name: narK [H]
Synonym: Bpro_4597
Alternate gene names: 91790426
Gene position: 4875179-4873917 (Counterclockwise)
Preceding gene: 91790427
Following gene: 91790425
Centisome position: 93.75
GC content: 61.6
Gene sequence:
>1263_bases ATGACCTCTGAACTGGGTAATTCAAGAAAAGCGTGGTCGGTGCTCATTGTCAGCACGCTGGCGTTCACCGTTTGCTTCAT GGTCTGGATGATGTTCGGCGTCATCGGCATACCGATCAAGAAGATGCTCAACCTCAACGCCACGGAGTTCGGCCTGCTTG CGGCCACGCCCGTGCTGACGGGCTCCCTGATCCGCGTTCCGCTGGGTATCTGGACCGACCGCTACGGCGGGCGCATGGTC ATGGCGATCCTGATGGCTGTCACGGTCCCCGCGATCTGGCTCATGAGTTACGCCACCGCGTACTGGCATTTTCTGGTGAT CGGCCTGTTTGTGGGCCTGGCCGGCGGTTCGTTCTCTGTGGGTACGCCCTATGTGGCGCGCTGGTTTCCGAAAAACCGCC AGGGCATGGCGATGGGCGTCTATGGCGCCGGCAATTCGGGCGCTGCCGTCAACAAGTTTGTGGCGCCCGTGTTGCTGGTG GCTTTCGGCTGGGCCATGGTGCCGCAGGTGTATGCCGTCATCATGCTGGGCGCGCTGGTGCTGTTCTGGCTGTTCAGCTA CAGCGACCCTTCGCACCTGGTGCCCAGCCACGTCAAGTTCAGCGACCAGCTCAAGGCGCTGAAAGACCCCAAGGTGATCA AGTACTGCCAGTACTACAGCATCGTGTTCGGCGGCTATGTGGCGCTGTCGCTCTGGATGGTTCAGTACTACGTCGGTGAA TTTGGCCTGGATATCCGTGTGGCGGCCTTGCTGGCGGCGTGCTTCTCGCTGCCGGGCGGCGTGTTGCGCGCTTTCGGCGG CGTGCTGTCCGACAGATACGGCGCGCACAGCGTCACCTGGTGGGTGATGTGGGTGAGCTGGGTCTGCCTGTTCCTGCTGT CCTACCCGCAGACCGACTTCACCATCCTCACGGTCAACGGACCCGCAAGCTTTCACATCGGGCTGAACGTCTACACCTTC ACCGCGCTGATGTTCACGCTGGGCATCGCCTGGGCCTTCGGCAAGGCCAGTGTTTTCAAGTACATCAGCGAAGACTACGG CGCGAACATCGGCGGCATCAGCGGCATCGTGGGCCTGGCAGGCGGCCTGGGTGGCTTTGTGCTGCCCATCATCTTCGGTG GGCTGATGGACCTGACCGGCATCCGCTCCAGCGCCTTCATGTTCATGTACGGCGTGGTCTGCGTTTCACTGATGTGGATG TACTGGACCGAAGTCCGCGGTACTGAAGTCATGGGCAGGAACGCGGCTGGCGCTCAGGCCTGA
Upstream 100 bases:
>100_bases GCCGCCATCGCCTTTTCTGCCTGATCTGCACGTTCCAAAGGAGGATGTTCAAGGGGGCGGGAAAGGTCGACAGTCATGCC ATGTGTCTGGAGAAACATGC
Downstream 100 bases:
>100_bases AACGGAACCCTTTTCGAGAAATCACCATGAATACAAAAACCATTTCCGGCACCGCTTCCACCAGTTCCACCGTTTCCGGT GTTGACATCATCGACTGGCG
Product: major facilitator transporter
Products: Proton [Cytoplasm]; nitrite [Periplasm] [C]
Alternate protein names: Nitrite facilitator [H]
Number of amino acids: Translated: 420; Mature: 419
Protein sequence:
>420_residues MTSELGNSRKAWSVLIVSTLAFTVCFMVWMMFGVIGIPIKKMLNLNATEFGLLAATPVLTGSLIRVPLGIWTDRYGGRMV MAILMAVTVPAIWLMSYATAYWHFLVIGLFVGLAGGSFSVGTPYVARWFPKNRQGMAMGVYGAGNSGAAVNKFVAPVLLV AFGWAMVPQVYAVIMLGALVLFWLFSYSDPSHLVPSHVKFSDQLKALKDPKVIKYCQYYSIVFGGYVALSLWMVQYYVGE FGLDIRVAALLAACFSLPGGVLRAFGGVLSDRYGAHSVTWWVMWVSWVCLFLLSYPQTDFTILTVNGPASFHIGLNVYTF TALMFTLGIAWAFGKASVFKYISEDYGANIGGISGIVGLAGGLGGFVLPIIFGGLMDLTGIRSSAFMFMYGVVCVSLMWM YWTEVRGTEVMGRNAAGAQA
Sequences:
>Translated_420_residues MTSELGNSRKAWSVLIVSTLAFTVCFMVWMMFGVIGIPIKKMLNLNATEFGLLAATPVLTGSLIRVPLGIWTDRYGGRMV MAILMAVTVPAIWLMSYATAYWHFLVIGLFVGLAGGSFSVGTPYVARWFPKNRQGMAMGVYGAGNSGAAVNKFVAPVLLV AFGWAMVPQVYAVIMLGALVLFWLFSYSDPSHLVPSHVKFSDQLKALKDPKVIKYCQYYSIVFGGYVALSLWMVQYYVGE FGLDIRVAALLAACFSLPGGVLRAFGGVLSDRYGAHSVTWWVMWVSWVCLFLLSYPQTDFTILTVNGPASFHIGLNVYTF TALMFTLGIAWAFGKASVFKYISEDYGANIGGISGIVGLAGGLGGFVLPIIFGGLMDLTGIRSSAFMFMYGVVCVSLMWM YWTEVRGTEVMGRNAAGAQA >Mature_419_residues TSELGNSRKAWSVLIVSTLAFTVCFMVWMMFGVIGIPIKKMLNLNATEFGLLAATPVLTGSLIRVPLGIWTDRYGGRMVM AILMAVTVPAIWLMSYATAYWHFLVIGLFVGLAGGSFSVGTPYVARWFPKNRQGMAMGVYGAGNSGAAVNKFVAPVLLVA FGWAMVPQVYAVIMLGALVLFWLFSYSDPSHLVPSHVKFSDQLKALKDPKVIKYCQYYSIVFGGYVALSLWMVQYYVGEF GLDIRVAALLAACFSLPGGVLRAFGGVLSDRYGAHSVTWWVMWVSWVCLFLLSYPQTDFTILTVNGPASFHIGLNVYTFT ALMFTLGIAWAFGKASVFKYISEDYGANIGGISGIVGLAGGLGGFVLPIIFGGLMDLTGIRSSAFMFMYGVVCVSLMWMY WTEVRGTEVMGRNAAGAQA
Specific function: Involved in excretion of nitrite produced by the dissimilatory reduction of nitrate [H]
COG id: COG2223
COG function: function code P; Nitrate/nitrite transporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Nitrate/nitrite porter (TC 2.A.1.8) family [H]
Homologues:
Organism=Escherichia coli, GI1787743, Length=443, Percent_Identity=24.3792325056433, Blast_Score=89, Evalue=7e-19, Organism=Escherichia coli, GI1787475, Length=446, Percent_Identity=26.6816143497758, Blast_Score=86, Evalue=6e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 45712; Mature: 45581
Theoretical pI: Translated: 9.39; Mature: 9.39
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSELGNSRKAWSVLIVSTLAFTVCFMVWMMFGVIGIPIKKMLNLNATEFGLLAATPVLT CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHH GSLIRVPLGIWTDRYGGRMVMAILMAVTVPAIWLMSYATAYWHFLVIGLFVGLAGGSFSV CHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC GTPYVARWFPKNRQGMAMGVYGAGNSGAAVNKFVAPVLLVAFGWAMVPQVYAVIMLGALV CCCHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFWLFSYSDPSHLVPSHVKFSDQLKALKDPKVIKYCQYYSIVFGGYVALSLWMVQYYVGE HHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGLDIRVAALLAACFSLPGGVLRAFGGVLSDRYGAHSVTWWVMWVSWVCLFLLSYPQTDF CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCE TILTVNGPASFHIGLNVYTFTALMFTLGIAWAFGKASVFKYISEDYGANIGGISGIVGLA EEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH GGLGGFVLPIIFGGLMDLTGIRSSAFMFMYGVVCVSLMWMYWTEVRGTEVMGRNAAGAQA CCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCC >Mature Secondary Structure TSELGNSRKAWSVLIVSTLAFTVCFMVWMMFGVIGIPIKKMLNLNATEFGLLAATPVLT CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHH GSLIRVPLGIWTDRYGGRMVMAILMAVTVPAIWLMSYATAYWHFLVIGLFVGLAGGSFSV CHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC GTPYVARWFPKNRQGMAMGVYGAGNSGAAVNKFVAPVLLVAFGWAMVPQVYAVIMLGALV CCCHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFWLFSYSDPSHLVPSHVKFSDQLKALKDPKVIKYCQYYSIVFGGYVALSLWMVQYYVGE HHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGLDIRVAALLAACFSLPGGVLRAFGGVLSDRYGAHSVTWWVMWVSWVCLFLLSYPQTDF CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCE TILTVNGPASFHIGLNVYTFTALMFTLGIAWAFGKASVFKYISEDYGANIGGISGIVGLA EEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH GGLGGFVLPIIFGGLMDLTGIRSSAFMFMYGVVCVSLMWMYWTEVRGTEVMGRNAAGAQA CCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: nitrite [Cytoplasm]; Proton [Periplasm] [C]
Specific reaction: nitrite [Cytoplasm] + Proton [Periplasm] = Proton [Cytoplasm] + nitrite [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8846791; 9384377; 9353933 [H]