| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is narK [H]
Identifier: 91790425
GI number: 91790425
Start: 4872232
End: 4873890
Strand: Reverse
Name: narK [H]
Synonym: Bpro_4596
Alternate gene names: 91790425
Gene position: 4873890-4872232 (Counterclockwise)
Preceding gene: 91790426
Following gene: 91790424
Centisome position: 93.72
GC content: 61.97
Gene sequence:
>1659_bases ATGAATACAAAAACCATTTCCGGCACCGCTTCCACCAGTTCCACCGTTTCCGGTGTTGACATCATCGACTGGCGTCCCGA GGACGACCAGTTCTGGGAGAGCACGGGAAAACGCATCGCCTACCGCAACCTCTGGATCTCCGTGCCCAGCCTGCTGTGCG GCTTTGCCGTCTGGGGCATGTGGGGCATCATCACGGTCCAGATGCTCAACCTGGGCTTTCCATTCACCCAGGCCGAGCTG TTCACGCTGACGGCCATTGCGGGCCTGGCTGGCGCCACCATGCGCATTCCGGCGTCCTTCCTGATCCGGCTGGCCGGCGG GCGCAACACCATTTTCCTGACGACCTCCATGCTGCTGGCGCCAGCGATAGGCACCGGCATCGTGCTCCAGCACCCCGAAT GGCCCTTGTGGTCCTTCCAGCTGATGGCCCTGTGGTCGGGGGTGGGTGGCGGAAATTTCGCCAGCTCCATGTCCAACATC AGCACCTTTTTCCCCAAGCGCTTGCAGGGCACGGCGCTGGGGCTCAATGCGGGACTGGGCAATTTCGGTGTCACGGCCAT GCAGGTCGTGATCCCGCTGGTGATGACGCTGAGCGTCTTCGGCAGCTTCGGGGGAGATTCGATGACCCTGGTGAAGGACA GCGGCTGGATTTTCGGAAAAATCGTCGCCGGCACGCCCACCTGGATCCAGAACGCCGGCTTCACCTGGCTGCTGTCGCTG GTGCCGCTGTCGATTCTCTGCTTCTTCGGCATGAACAACCTCACGACGGTGTCGCCCGCGATTGGCGGCACGATCCCGGC CTTTCTCAAGATCATCTGGCTGTACACGCTGTCGTTTGTGCCGGCCGGCATCGGCCTGTATCTCTACCTGCCCAAGCCCA CCGGGCTGGGCCTGCTGAACATGTGGATTGCGATGCCCCTGATCGTGGCCAGCACCCTGATGGTGCTGAAGGTCACGGCC TTTGGCCCGATGAAGGAAAACATTGCCAAGCAGTTCGCGATTTTCAGCAACAAGCACACCTGGTCGCTGACCCTGCTGTA CATCGTGACTTTCGGCTCGTTCATCGGCTTTTCGATGGCCTTGCCGCTCGCCATCACGGTGATCTTCGGCATCAGCCACG TGCCGGACGCGGCAGGCGTCATTCAGCACACATTGAAAAATCCGAACGCACCCTCGGCACTGACCTTCGCCTGGATAGGC CCCTTTGTCGGCGCCTTGATCCGGCCCGTGGGAGGGTGGGTGTCGGACAAGGTCGGCGGCTCCATCGTGACCCAAATCAT TTCCGCTGTCATGGTCGTCGCTTCGGCCGCGGTCGGCTACGTCATGCTGCTGGCCTACAAGTCGGCCGCGCCCGAGCAGT ACTTCCTGCTCTTCATGGTGCTGTTCGTCGTGCTGTTTGCGGCCAGCGGCATCGGCAACGGCTCCACCTTCCGCACCATT GGCGTCATCTTCGACCGCCAGCAGGCCGGCCCTGTGCTCGGCTGGACTTCGGCCATTGCCGCTTACGGCGCCTTCATCGC CCCGGTGGTGATCGGTGCACAGATCAAGGCCGGCACGCCGGAAAACGCGATGTATGGCTTTGCCATCTTCTATGCCCTGT GCCTGGTGCTCAACTGGTGGTTCTACCTGCGCCGCGGCGCCGAGATCAAGAACCCCTGA
Upstream 100 bases:
>100_bases TGATGTGGATGTACTGGACCGAAGTCCGCGGTACTGAAGTCATGGGCAGGAACGCGGCTGGCGCTCAGGCCTGAAACGGA ACCCTTTTCGAGAAATCACC
Downstream 100 bases:
>100_bases CTCACCGCCCATCCGTTTTTTACCGCCTTACCGGAGAACCAAATGAGTCATTTTCTTGATCGACTGAATCACTTTTCAAA TCCACGGGAATCCTTTTCTG
Product: nitrate/nitrite antiporter
Products: NA
Alternate protein names: Nitrite facilitator 1 [H]
Number of amino acids: Translated: 552; Mature: 552
Protein sequence:
>552_residues MNTKTISGTASTSSTVSGVDIIDWRPEDDQFWESTGKRIAYRNLWISVPSLLCGFAVWGMWGIITVQMLNLGFPFTQAEL FTLTAIAGLAGATMRIPASFLIRLAGGRNTIFLTTSMLLAPAIGTGIVLQHPEWPLWSFQLMALWSGVGGGNFASSMSNI STFFPKRLQGTALGLNAGLGNFGVTAMQVVIPLVMTLSVFGSFGGDSMTLVKDSGWIFGKIVAGTPTWIQNAGFTWLLSL VPLSILCFFGMNNLTTVSPAIGGTIPAFLKIIWLYTLSFVPAGIGLYLYLPKPTGLGLLNMWIAMPLIVASTLMVLKVTA FGPMKENIAKQFAIFSNKHTWSLTLLYIVTFGSFIGFSMALPLAITVIFGISHVPDAAGVIQHTLKNPNAPSALTFAWIG PFVGALIRPVGGWVSDKVGGSIVTQIISAVMVVASAAVGYVMLLAYKSAAPEQYFLLFMVLFVVLFAASGIGNGSTFRTI GVIFDRQQAGPVLGWTSAIAAYGAFIAPVVIGAQIKAGTPENAMYGFAIFYALCLVLNWWFYLRRGAEIKNP
Sequences:
>Translated_552_residues MNTKTISGTASTSSTVSGVDIIDWRPEDDQFWESTGKRIAYRNLWISVPSLLCGFAVWGMWGIITVQMLNLGFPFTQAEL FTLTAIAGLAGATMRIPASFLIRLAGGRNTIFLTTSMLLAPAIGTGIVLQHPEWPLWSFQLMALWSGVGGGNFASSMSNI STFFPKRLQGTALGLNAGLGNFGVTAMQVVIPLVMTLSVFGSFGGDSMTLVKDSGWIFGKIVAGTPTWIQNAGFTWLLSL VPLSILCFFGMNNLTTVSPAIGGTIPAFLKIIWLYTLSFVPAGIGLYLYLPKPTGLGLLNMWIAMPLIVASTLMVLKVTA FGPMKENIAKQFAIFSNKHTWSLTLLYIVTFGSFIGFSMALPLAITVIFGISHVPDAAGVIQHTLKNPNAPSALTFAWIG PFVGALIRPVGGWVSDKVGGSIVTQIISAVMVVASAAVGYVMLLAYKSAAPEQYFLLFMVLFVVLFAASGIGNGSTFRTI GVIFDRQQAGPVLGWTSAIAAYGAFIAPVVIGAQIKAGTPENAMYGFAIFYALCLVLNWWFYLRRGAEIKNP >Mature_552_residues MNTKTISGTASTSSTVSGVDIIDWRPEDDQFWESTGKRIAYRNLWISVPSLLCGFAVWGMWGIITVQMLNLGFPFTQAEL FTLTAIAGLAGATMRIPASFLIRLAGGRNTIFLTTSMLLAPAIGTGIVLQHPEWPLWSFQLMALWSGVGGGNFASSMSNI STFFPKRLQGTALGLNAGLGNFGVTAMQVVIPLVMTLSVFGSFGGDSMTLVKDSGWIFGKIVAGTPTWIQNAGFTWLLSL VPLSILCFFGMNNLTTVSPAIGGTIPAFLKIIWLYTLSFVPAGIGLYLYLPKPTGLGLLNMWIAMPLIVASTLMVLKVTA FGPMKENIAKQFAIFSNKHTWSLTLLYIVTFGSFIGFSMALPLAITVIFGISHVPDAAGVIQHTLKNPNAPSALTFAWIG PFVGALIRPVGGWVSDKVGGSIVTQIISAVMVVASAAVGYVMLLAYKSAAPEQYFLLFMVLFVVLFAASGIGNGSTFRTI GVIFDRQQAGPVLGWTSAIAAYGAFIAPVVIGAQIKAGTPENAMYGFAIFYALCLVLNWWFYLRRGAEIKNP
Specific function: Involved in excretion of nitrite produced by the dissimilatory reduction of nitrate [H]
COG id: COG2223
COG function: function code P; Nitrate/nitrite transporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Nitrate/nitrite porter (TC 2.A.1.8) family [H]
Homologues:
Organism=Escherichia coli, GI1787475, Length=272, Percent_Identity=41.1764705882353, Blast_Score=180, Evalue=2e-46, Organism=Escherichia coli, GI1787743, Length=248, Percent_Identity=40.7258064516129, Blast_Score=166, Evalue=5e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR004737 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 59137; Mature: 59137
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTKTISGTASTSSTVSGVDIIDWRPEDDQFWESTGKRIAYRNLWISVPSLLCGFAVWGM CCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHH WGIITVQMLNLGFPFTQAELFTLTAIAGLAGATMRIPASFLIRLAGGRNTIFLTTSMLLA HHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHCCCHHHHHEECCCCCEEEEEHHHHHH PAIGTGIVLQHPEWPLWSFQLMALWSGVGGGNFASSMSNISTFFPKRLQGTALGLNAGLG HHCCCCEEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCC NFGVTAMQVVIPLVMTLSVFGSFGGDSMTLVKDSGWIFGKIVAGTPTWIQNAGFTWLLSL CCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEEECCCCHHHHCCCHHHHHHH VPLSILCFFGMNNLTTVSPAIGGTIPAFLKIIWLYTLSFVPAGIGLYLYLPKPTGLGLLN HHHHHHHHHCCCCCCEECCHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHH MWIAMPLIVASTLMVLKVTAFGPMKENIAKQFAIFSNKHTWSLTLLYIVTFGSFIGFSMA HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH LPLAITVIFGISHVPDAAGVIQHTLKNPNAPSALTFAWIGPFVGALIRPVGGWVSDKVGG HHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHCCH SIVTQIISAVMVVASAAVGYVMLLAYKSAAPEQYFLLFMVLFVVLFAASGIGNGSTFRTI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEE GVIFDRQQAGPVLGWTSAIAAYGAFIAPVVIGAQIKAGTPENAMYGFAIFYALCLVLNWW EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHHHHHHHH FYLRRGAEIKNP HHHHCCCCCCCC >Mature Secondary Structure MNTKTISGTASTSSTVSGVDIIDWRPEDDQFWESTGKRIAYRNLWISVPSLLCGFAVWGM CCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHH WGIITVQMLNLGFPFTQAELFTLTAIAGLAGATMRIPASFLIRLAGGRNTIFLTTSMLLA HHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHCCCHHHHHEECCCCCEEEEEHHHHHH PAIGTGIVLQHPEWPLWSFQLMALWSGVGGGNFASSMSNISTFFPKRLQGTALGLNAGLG HHCCCCEEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCC NFGVTAMQVVIPLVMTLSVFGSFGGDSMTLVKDSGWIFGKIVAGTPTWIQNAGFTWLLSL CCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEEECCCCHHHHCCCHHHHHHH VPLSILCFFGMNNLTTVSPAIGGTIPAFLKIIWLYTLSFVPAGIGLYLYLPKPTGLGLLN HHHHHHHHHCCCCCCEECCHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHH MWIAMPLIVASTLMVLKVTAFGPMKENIAKQFAIFSNKHTWSLTLLYIVTFGSFIGFSMA HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH LPLAITVIFGISHVPDAAGVIQHTLKNPNAPSALTFAWIGPFVGALIRPVGGWVSDKVGG HHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHCCH SIVTQIISAVMVVASAAVGYVMLLAYKSAAPEQYFLLFMVLFVVLFAASGIGNGSTFRTI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEE GVIFDRQQAGPVLGWTSAIAAYGAFIAPVVIGAQIKAGTPENAMYGFAIFYALCLVLNWW EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHHHHHHHH FYLRRGAEIKNP HHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2668029; 8905232; 9278503; 2657652 [H]