Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91790383

Identifier: 91790383

GI number: 91790383

Start: 4816529

End: 4817554

Strand: Direct

Name: 91790383

Synonym: Bpro_4553

Alternate gene names: NA

Gene position: 4816529-4817554 (Clockwise)

Preceding gene: 91790381

Following gene: 91790384

Centisome position: 92.62

GC content: 60.33

Gene sequence:

>1026_bases
ATGCCGCATCCACACATCGCCCTGCCCCTCTCATTGACGCCTTCCAGGCAATCAATGCCCTTCACGCCCTGGTTGACCGG
GCTTTCCATGGCGCTTCTCGCCACGGCTTCCGGCCAGGTGCTGGCACAAGCCTGGCCCGAAAAAACCGTCACCATTGTGG
TGCCCACCGCCGCCGGTGGCGCCAATGACGCGATGGCGCGCATCATTGGACAAGGCCTCAGCACACGGCTTGGAAAAGCT
GTCATTGTTGAAAACAAGGCCGGCGCCAACGGCGCCATTGCCAGCGAATTTGTGGCACGCGCCGCGCCCGATGGCTACAC
CATCATGTTTGGCTATATCGCCACCCACGGCATCAACCCGGCGCTGCAAAAACTCAAGTACGACCCGGTGACGGATTTCG
AGCCGATCGGCATGGTGGCTGCTTCGCCGACCGTGCTGGTCGCTCACAATGGAGTCGCCGCCAAGAACGTCAAGGAACTG
GTGCAACTGATCAAGGCCAAGCCGGGCACCTTCAGTTATGCCTCGGCCGGCAACGGCACCGCACCGCACATCGCCGGTGA
GCTGTTCAAACTGTCGGCCGGGCTGGACGTGGTGAGCGTTCCTTACAAGGGCTCGGCCCCCGCCGTGGTGGACACCATTG
CGGGCAACACGCAGTTCATGTTCCCCAGCCTGTTCACGGCCTACCCGCAAGTCAAGGGCGGCAAACTCAAGGCACTGGGT
ATTGCAGGCGACAAGCGCTCGGCCATATTGCCCGATGTGCCCACACTGGCCGAACAGGGCATAGCCAATGTCAGCATGTC
ACAGTGGTACGCCATGTTCGCACCCGCAAAAACGCCCAAGGCCGTGATCGACCGGCTCAACCGCGAAATGAACAGTGTTC
TGGCCGACAAGGCGGTTCAGAAAAAAATCGAGGACCAGGGCGCTGAAGTCGAAACCGGCACACCCGAGCAGTTGAAAACC
CTGGTGCAGAAAGAAGTTGCGCGCTGGAAAGGCGTTGTCGCAGCAGCCAAAATCAAAGTCGAATAA

Upstream 100 bases:

>100_bases
TAGCAAAAATTGCAATTTACACGCAAGCAGGATAACCGGATGATTAAGTCCAAAGCACGGGTCAACCTCCTGACCCGAAG
CCCAACCGAAGGAGACTCAC

Downstream 100 bases:

>100_bases
GCGGTAGATCAGAAAGATCACGCAGGGAATTTTCATGAACTTGCAAAACTGGATTGGCCGCAGCGAAACGGTGGAAGACA
TCGCCACCGCCACACCTTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 340

Protein sequence:

>341_residues
MPHPHIALPLSLTPSRQSMPFTPWLTGLSMALLATASGQVLAQAWPEKTVTIVVPTAAGGANDAMARIIGQGLSTRLGKA
VIVENKAGANGAIASEFVARAAPDGYTIMFGYIATHGINPALQKLKYDPVTDFEPIGMVAASPTVLVAHNGVAAKNVKEL
VQLIKAKPGTFSYASAGNGTAPHIAGELFKLSAGLDVVSVPYKGSAPAVVDTIAGNTQFMFPSLFTAYPQVKGGKLKALG
IAGDKRSAILPDVPTLAEQGIANVSMSQWYAMFAPAKTPKAVIDRLNREMNSVLADKAVQKKIEDQGAEVETGTPEQLKT
LVQKEVARWKGVVAAAKIKVE

Sequences:

>Translated_341_residues
MPHPHIALPLSLTPSRQSMPFTPWLTGLSMALLATASGQVLAQAWPEKTVTIVVPTAAGGANDAMARIIGQGLSTRLGKA
VIVENKAGANGAIASEFVARAAPDGYTIMFGYIATHGINPALQKLKYDPVTDFEPIGMVAASPTVLVAHNGVAAKNVKEL
VQLIKAKPGTFSYASAGNGTAPHIAGELFKLSAGLDVVSVPYKGSAPAVVDTIAGNTQFMFPSLFTAYPQVKGGKLKALG
IAGDKRSAILPDVPTLAEQGIANVSMSQWYAMFAPAKTPKAVIDRLNREMNSVLADKAVQKKIEDQGAEVETGTPEQLKT
LVQKEVARWKGVVAAAKIKVE
>Mature_340_residues
PHPHIALPLSLTPSRQSMPFTPWLTGLSMALLATASGQVLAQAWPEKTVTIVVPTAAGGANDAMARIIGQGLSTRLGKAV
IVENKAGANGAIASEFVARAAPDGYTIMFGYIATHGINPALQKLKYDPVTDFEPIGMVAASPTVLVAHNGVAAKNVKELV
QLIKAKPGTFSYASAGNGTAPHIAGELFKLSAGLDVVSVPYKGSAPAVVDTIAGNTQFMFPSLFTAYPQVKGGKLKALGI
AGDKRSAILPDVPTLAEQGIANVSMSQWYAMFAPAKTPKAVIDRLNREMNSVLADKAVQKKIEDQGAEVETGTPEQLKTL
VQKEVARWKGVVAAAKIKVE

Specific function: Unknown

COG id: COG3181

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0065 (bug) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005064 [H]

Pfam domain/function: PF03401 Bug [H]

EC number: NA

Molecular weight: Translated: 35703; Mature: 35572

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHPHIALPLSLTPSRQSMPFTPWLTGLSMALLATASGQVLAQAWPEKTVTIVVPTAAGG
CCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCEEEEEEECCCCC
ANDAMARIIGQGLSTRLGKAVIVENKAGANGAIASEFVARAAPDGYTIMFGYIATHGINP
CHHHHHHHHHCCHHHHCCCEEEEECCCCCCCHHHHHHHHHCCCCCEEEEEEEHHHCCCCH
ALQKLKYDPVTDFEPIGMVAASPTVLVAHNGVAAKNVKELVQLIKAKPGTFSYASAGNGT
HHHHCCCCCCCCCCCCCEEECCCEEEEEECCCCHHHHHHHHHHHHCCCCCEEECCCCCCC
APHIAGELFKLSAGLDVVSVPYKGSAPAVVDTIAGNTQFMFPSLFTAYPQVKGGKLKALG
CCHHHHHHHHHHCCCCEEECCCCCCCCCEEHHHCCCCEEECHHHHHHCCCCCCCEEEEEE
IAGDKRSAILPDVPTLAEQGIANVSMSQWYAMFAPAKTPKAVIDRLNREMNSVLADKAVQ
ECCCCCCCCCCCCHHHHHHCCCCCCHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
KKIEDQGAEVETGTPEQLKTLVQKEVARWKGVVAAAKIKVE
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCEEEEEEEEEC
>Mature Secondary Structure 
PHPHIALPLSLTPSRQSMPFTPWLTGLSMALLATASGQVLAQAWPEKTVTIVVPTAAGG
CCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCEEEEEEECCCCC
ANDAMARIIGQGLSTRLGKAVIVENKAGANGAIASEFVARAAPDGYTIMFGYIATHGINP
CHHHHHHHHHCCHHHHCCCEEEEECCCCCCCHHHHHHHHHCCCCCEEEEEEEHHHCCCCH
ALQKLKYDPVTDFEPIGMVAASPTVLVAHNGVAAKNVKELVQLIKAKPGTFSYASAGNGT
HHHHCCCCCCCCCCCCCEEECCCEEEEEECCCCHHHHHHHHHHHHCCCCCEEECCCCCCC
APHIAGELFKLSAGLDVVSVPYKGSAPAVVDTIAGNTQFMFPSLFTAYPQVKGGKLKALG
CCHHHHHHHHHHCCCCEEECCCCCCCCCEEHHHCCCCEEECHHHHHHCCCCCCCEEEEEE
IAGDKRSAILPDVPTLAEQGIANVSMSQWYAMFAPAKTPKAVIDRLNREMNSVLADKAVQ
ECCCCCCCCCCCCHHHHHHCCCCCCHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
KKIEDQGAEVETGTPEQLKTLVQKEVARWKGVVAAAKIKVE
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2013566 [H]