| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91790369
Identifier: 91790369
GI number: 91790369
Start: 4798285
End: 4799244
Strand: Direct
Name: 91790369
Synonym: Bpro_4537
Alternate gene names: NA
Gene position: 4798285-4799244 (Clockwise)
Preceding gene: 91790368
Following gene: 91790370
Centisome position: 92.27
GC content: 65.1
Gene sequence:
>960_bases ATGAAATTCACTTCCCGCATTCTCGCCCTGGCCCTGTCGTTCACCGCCTTCGCGGCCCCGGCGCAAGACAGCAAACCGAT CGAATGGGTGGTCGGCTATGCGGCCGGCGGCGGCTCGGACGCGGTGGCACGCGCCACCGCCGAAGCCATGTCAAAGAACC TCGGCCAGACCATCATCATCAACAACAAGCCCGGCGCGGCGACCAACATCGCAGCCGACTATGTGGCACGCTCGAAAGAC TATGGCCATATGCTGTTTACGGCCGACTTCGCCACGCTCGCGGCCAACCCATTTTTGTTTTCCAGGCTCAGCTACAACGC CGAGAAGGACCTGATGCCGGTCGGCCTGCTGGCGCGCTTTCCGCTGGTACTGGTGGTGGGTGCGAACGTGCCGGTGAAAA ACTTCAAGGAGTTCCTGGCCTGGGCCAAGGCGCAGCCGAACGGCATCAACTACGCCTCGGCGGGCGCGGGCAGTCCGCAC CACCTGGCGACCGAAATGCTGCGCGAGAAAACCGGCCTCAAGATGACGCACGTACCCTACCGTGGCGCGGCGCCGGCGAT GCAGGACATCCTGGGCGGCGTTGTCCCCTTCATGCTGGTCGACACCGCGAGCGGCAACCAGTTCGTGCTGTCCGGCAAGG TCAAGGCCATCGGTGTGGCAAGCGCCCAGCGCATCGCCACGCTGCCTGACGTGCCGACGCTCGCCGAGCAGGGGCTGACC GGCTTCGAGGCCTATGCCTGGCAAGGTCTTTCGGTGCCCGCCGGCACGCCGCCCGAGGCAGTCAACAAGCTCAACAAGGC GCTGGTTGACGCGCTGAACTCGACCACGGTCAAAGCACGCTTTCAGGCGCTCGGTGTCGAGAGCCTGCCCGGCACGCCGG CGCAGATGGCCAGCTACGTCAAGAGCGAGCGCGAGCGCTGGGGACGGTTGATCCGCGACAACGGCATCAAGGTTGACTGA
Upstream 100 bases:
>100_bases GGTGCTGGCCAATCACATCGGCGCGCTGTCCGTACTGCGCGAGGCCTTCACCGCGGCGCAGCGCGCCTGATTCCTGCACC CCAACCCCAAGGAGACATTC
Downstream 100 bases:
>100_bases ACATACGGAAATAGCTCTGCGGCTCCTATCCTGATTGCGCATCCGGGCCTGGAAATACCAGCCGTTCCAGCCCTTCCGCG CGAAGTTCGAGCGCGCCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 319; Mature: 319
Protein sequence:
>319_residues MKFTSRILALALSFTAFAAPAQDSKPIEWVVGYAAGGGSDAVARATAEAMSKNLGQTIIINNKPGAATNIAADYVARSKD YGHMLFTADFATLAANPFLFSRLSYNAEKDLMPVGLLARFPLVLVVGANVPVKNFKEFLAWAKAQPNGINYASAGAGSPH HLATEMLREKTGLKMTHVPYRGAAPAMQDILGGVVPFMLVDTASGNQFVLSGKVKAIGVASAQRIATLPDVPTLAEQGLT GFEAYAWQGLSVPAGTPPEAVNKLNKALVDALNSTTVKARFQALGVESLPGTPAQMASYVKSERERWGRLIRDNGIKVD
Sequences:
>Translated_319_residues MKFTSRILALALSFTAFAAPAQDSKPIEWVVGYAAGGGSDAVARATAEAMSKNLGQTIIINNKPGAATNIAADYVARSKD YGHMLFTADFATLAANPFLFSRLSYNAEKDLMPVGLLARFPLVLVVGANVPVKNFKEFLAWAKAQPNGINYASAGAGSPH HLATEMLREKTGLKMTHVPYRGAAPAMQDILGGVVPFMLVDTASGNQFVLSGKVKAIGVASAQRIATLPDVPTLAEQGLT GFEAYAWQGLSVPAGTPPEAVNKLNKALVDALNSTTVKARFQALGVESLPGTPAQMASYVKSERERWGRLIRDNGIKVD >Mature_319_residues MKFTSRILALALSFTAFAAPAQDSKPIEWVVGYAAGGGSDAVARATAEAMSKNLGQTIIINNKPGAATNIAADYVARSKD YGHMLFTADFATLAANPFLFSRLSYNAEKDLMPVGLLARFPLVLVVGANVPVKNFKEFLAWAKAQPNGINYASAGAGSPH HLATEMLREKTGLKMTHVPYRGAAPAMQDILGGVVPFMLVDTASGNQFVLSGKVKAIGVASAQRIATLPDVPTLAEQGLT GFEAYAWQGLSVPAGTPPEAVNKLNKALVDALNSTTVKARFQALGVESLPGTPAQMASYVKSERERWGRLIRDNGIKVD
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 33748; Mature: 33748
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFTSRILALALSFTAFAAPAQDSKPIEWVVGYAAGGGSDAVARATAEAMSKNLGQTIII CCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEE NNKPGAATNIAADYVARSKDYGHMLFTADFATLAANPFLFSRLSYNAEKDLMPVGLLARF ECCCCCHHHHHHHHHHHCCCCCCEEEEEHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHHC PLVLVVGANVPVKNFKEFLAWAKAQPNGINYASAGAGSPHHLATEMLREKTGLKMTHVPY CEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEECCC RGAAPAMQDILGGVVPFMLVDTASGNQFVLSGKVKAIGVASAQRIATLPDVPTLAEQGLT CCCCHHHHHHHHHHHHHHEEECCCCCEEEEECCEEEEECCCHHHHHCCCCCCHHHHCCCC GFEAYAWQGLSVPAGTPPEAVNKLNKALVDALNSTTVKARFQALGVESLPGTPAQMASYV CCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHH KSERERWGRLIRDNGIKVD HHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKFTSRILALALSFTAFAAPAQDSKPIEWVVGYAAGGGSDAVARATAEAMSKNLGQTIII CCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEE NNKPGAATNIAADYVARSKDYGHMLFTADFATLAANPFLFSRLSYNAEKDLMPVGLLARF ECCCCCHHHHHHHHHHHCCCCCCEEEEEHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHHC PLVLVVGANVPVKNFKEFLAWAKAQPNGINYASAGAGSPHHLATEMLREKTGLKMTHVPY CEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEECCC RGAAPAMQDILGGVVPFMLVDTASGNQFVLSGKVKAIGVASAQRIATLPDVPTLAEQGLT CCCCHHHHHHHHHHHHHHEEECCCCCEEEEECCEEEEECCCHHHHHCCCCCCHHHHCCCC GFEAYAWQGLSVPAGTPPEAVNKLNKALVDALNSTTVKARFQALGVESLPGTPAQMASYV CCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHH KSERERWGRLIRDNGIKVD HHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2013566 [H]