| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91790360
Identifier: 91790360
GI number: 91790360
Start: 4788162
End: 4790726
Strand: Direct
Name: 91790360
Synonym: Bpro_4528
Alternate gene names: NA
Gene position: 4788162-4790726 (Clockwise)
Preceding gene: 91790357
Following gene: 91790361
Centisome position: 92.08
GC content: 65.34
Gene sequence:
>2565_bases ATGGCCTCGCAACCTGAAGTTCTTCAATCCTGCATAGAGGAAGCCGCAAAAGCAGCCAAGCCGGCACTGGAACGCTGCAT CGAGGATGCAGTTGCAGCGCTGGAGCTCGCGCAAAGTCAAAGTGCCAGTGCGGCAGAGCGCGAGGAACTCACTGCAGCCT GCCGCGCCTTGCTGGAACACAAGACAAACTGGAGCACGCAGTACAGGGCCGACCTGCTTGTGGTTTTCAGGACCCAGGCC GCAGAGGCAGCGCAAGCGACCTTGACGCCGGCCGGTGTATCGCCGCGCAGCCCGGGCGTCGCCTCGACAAGCTCGCTCTC CTCCATCGAAGCGTTTTCGCTGGTCGAGGACGCCGATGTGTCCCTGGCGATTGAGTCGTCGCGGCTGCTGCAGCTGGTTT TACCGGCGGTAGAGCAAAGCCTCGCTGAACTCAACACGCTGATCAGCGCCGTACAAGGCCTGCCCAATGTGCGGCCTGAA CTCAACCCGCTGCGGCCGGAGGTCTTTGCGCAGACGCTTCAGCAAATGATTTTTGCGGCGCCCGTCGATCGGGCCGTCTG CACACTGTGGATCAAATACCTGGCCGCCCCGCTCGGGCGCGAACTCAAGCTGGTGTATGAACGCCTGATCAACCAGCTTG AGCTGGCCAATGTACAGGGCGCTGGCTACCGCGTGCTGCAAACACCTGCCAGTGGCGGCAGCAAAAGCAGGGGCAACCCG CAGACAGGGACCGGCCAGGGCGCTGGCCGCGCAGAGGAGTCGTTCCGCCCCCCGCCGGTCGGCTATGTGTCTGACGAGCC CCTGCGGCCCTCGCAGTTTGCCGACCTGACCGACCCCGAGGTCAAGAGCGACCTGTTCCATGATTTCCTGTTCAATGGCG CAAGCAACGCCCAGCGCGGCCTGGCACCCGCCTACTACGACAGCATTGAAGAAGAACTGAAGGCGCTGAAAGCAGCGCGC GAGACGGCACAGGCTCCGCTGGAGTCACGCTCTGCACCGCTTTCCGGCTATCAGAAAGTGCCGGCCGTCGACCGCCCCCA GCGGGTGGTCGATGAACGCAGCCAGCTGAGCCAGCAGGTCTGGGGCGCTTATGGGCGCCCCAGGGAACGCGACATTGTCC GGACCCAGCTGAAGAAGGAAGCCAGGCAGGTCGGCCAGGTGATGGGGCTGGAGGTGGTGCGCAAGCTGGTCAGCCATGTG GCACAGGACCCGCGCCTGCTGGCGCCGGTACGCGAGGCCATCGTGGCGCTTGAGCCGTCGCTGATGCGACTGGCCATGGT GGATCCGCATTTTTTCAGCGACGAGGACCATCCCGGCCGGCGCCTGATGGAGCGCGTGGCCCAACGCAGCTTCAGCTACA ACGACGAGTTCAGTACAGAGTTCTCGGAGTTTCTCCAGCCGGTCATACGCGCCTTCAACAAACTCAACGGACGGGACATC CAGGACGCCCAGCCTTTCGACTCCGCGCTGGCCACACTGGCCCAGCACTGGGACGAACAGGACCAGTTCGAAGCCAAAAA CCGCGACAACCTGCTGCAGGCCCTGCGATTTGCGGAGGAACGCCAAACCCTCGCCGATGAGATTGCCCTGGAGCTGAGCA GGCGTTCGGACCTGGGGGATGTACCGGCTCTGGTACTGGACTTCCTGTTCGAGTCCTGGGCGCTCGCCATGGCCCATGCC CGGCTCACCGACACGCGCAATCAGGTCGACCCGGAAGGTTTTGGTTCGGTGGTGCCCGACCTGCTGTGGAGCGTCAAACG GGAAGTGACCCTGAAGCGCCCCGCCAAACTGTTCGAGATGCTGCCGGGCCTGCTGGGCAAACTTCACGCCGGGCTGGCCT TGCTGGGCCAGGACCCGCGCGAAAGCGAGACATTCTTTGAAGAGCTGATGAAGCTGCACCGGCCGGTACTCAAGCTGCGC CGGCTCAAGAGCCAGCGTGACGCGGAGGAGTCCGGTGCCATGCCGCTGGAGCCTGAAGAAGCCCCGGCCCCCACATTCAT CACCGACACCAGCACCGAACCCCGCCAGGCCCGATCAGCCGCGCCCCCCTGGCTGGGCCGCGATGACCTGGATGCTGCCG GATTTGAGGATACGCTGCCCACCGCGCCCGGAGAACTCGCGCCGCTGGAAGACGACACCCCTGCCGTGGCCGAGTCAGCG ACAACCGACGATCCGGCCGGGACCCCAGAAACACAGCCGGCGCAGCAGCAGGGCGTTCCATCTCCAGCAACCGGCCCAGC CATCGCCCCGGCCGAAGCCGAGCGCCTGCTGCGCGGCCTGCAGGCGGGCCACTGGGTCGACCTGTATTCCAAGCACCGCT GGCTGCGCGCCCAGCTGATCTGGGCCGGCACCAAGGGCACGCTCTTCATGTTTGTGAGCCATGGCGGGCAACCCCATTCC ATGACACGGCGAAGCTGCGAGCGACTGATCCGGGACCGCCTGCTGCGGCCCGTCGATACCCAAGGCGTGGTCGGCCAGGC GCTCGACGCGCTGGCCCTGGAGGCGGATGCCTCCGCCGGCGCGCCCGGGGATGTCTCGGCACCAGCAGACCTCATGAACG CTTGA
Upstream 100 bases:
>100_bases TTGCCCTTTAACCTCGGAGCTCTCCGTTCAGGCATTGGCGGTTGCAACCAGCCCGGCTGAGTGTCATTATCCAAAAAATT TTCCCGCAAACCCGCTCTAG
Downstream 100 bases:
>100_bases GCGCCTGAGCACTTAAGCTCGCAAGCGCTTTTTCCTGGTCCGCCAACCCGCAAGGTTGCGGTATGGTCGGCGCTAACGAC CTCGACCGGCATGCAGGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 854; Mature: 853
Protein sequence:
>854_residues MASQPEVLQSCIEEAAKAAKPALERCIEDAVAALELAQSQSASAAEREELTAACRALLEHKTNWSTQYRADLLVVFRTQA AEAAQATLTPAGVSPRSPGVASTSSLSSIEAFSLVEDADVSLAIESSRLLQLVLPAVEQSLAELNTLISAVQGLPNVRPE LNPLRPEVFAQTLQQMIFAAPVDRAVCTLWIKYLAAPLGRELKLVYERLINQLELANVQGAGYRVLQTPASGGSKSRGNP QTGTGQGAGRAEESFRPPPVGYVSDEPLRPSQFADLTDPEVKSDLFHDFLFNGASNAQRGLAPAYYDSIEEELKALKAAR ETAQAPLESRSAPLSGYQKVPAVDRPQRVVDERSQLSQQVWGAYGRPRERDIVRTQLKKEARQVGQVMGLEVVRKLVSHV AQDPRLLAPVREAIVALEPSLMRLAMVDPHFFSDEDHPGRRLMERVAQRSFSYNDEFSTEFSEFLQPVIRAFNKLNGRDI QDAQPFDSALATLAQHWDEQDQFEAKNRDNLLQALRFAEERQTLADEIALELSRRSDLGDVPALVLDFLFESWALAMAHA RLTDTRNQVDPEGFGSVVPDLLWSVKREVTLKRPAKLFEMLPGLLGKLHAGLALLGQDPRESETFFEELMKLHRPVLKLR RLKSQRDAEESGAMPLEPEEAPAPTFITDTSTEPRQARSAAPPWLGRDDLDAAGFEDTLPTAPGELAPLEDDTPAVAESA TTDDPAGTPETQPAQQQGVPSPATGPAIAPAEAERLLRGLQAGHWVDLYSKHRWLRAQLIWAGTKGTLFMFVSHGGQPHS MTRRSCERLIRDRLLRPVDTQGVVGQALDALALEADASAGAPGDVSAPADLMNA
Sequences:
>Translated_854_residues MASQPEVLQSCIEEAAKAAKPALERCIEDAVAALELAQSQSASAAEREELTAACRALLEHKTNWSTQYRADLLVVFRTQA AEAAQATLTPAGVSPRSPGVASTSSLSSIEAFSLVEDADVSLAIESSRLLQLVLPAVEQSLAELNTLISAVQGLPNVRPE LNPLRPEVFAQTLQQMIFAAPVDRAVCTLWIKYLAAPLGRELKLVYERLINQLELANVQGAGYRVLQTPASGGSKSRGNP QTGTGQGAGRAEESFRPPPVGYVSDEPLRPSQFADLTDPEVKSDLFHDFLFNGASNAQRGLAPAYYDSIEEELKALKAAR ETAQAPLESRSAPLSGYQKVPAVDRPQRVVDERSQLSQQVWGAYGRPRERDIVRTQLKKEARQVGQVMGLEVVRKLVSHV AQDPRLLAPVREAIVALEPSLMRLAMVDPHFFSDEDHPGRRLMERVAQRSFSYNDEFSTEFSEFLQPVIRAFNKLNGRDI QDAQPFDSALATLAQHWDEQDQFEAKNRDNLLQALRFAEERQTLADEIALELSRRSDLGDVPALVLDFLFESWALAMAHA RLTDTRNQVDPEGFGSVVPDLLWSVKREVTLKRPAKLFEMLPGLLGKLHAGLALLGQDPRESETFFEELMKLHRPVLKLR RLKSQRDAEESGAMPLEPEEAPAPTFITDTSTEPRQARSAAPPWLGRDDLDAAGFEDTLPTAPGELAPLEDDTPAVAESA TTDDPAGTPETQPAQQQGVPSPATGPAIAPAEAERLLRGLQAGHWVDLYSKHRWLRAQLIWAGTKGTLFMFVSHGGQPHS MTRRSCERLIRDRLLRPVDTQGVVGQALDALALEADASAGAPGDVSAPADLMNA >Mature_853_residues ASQPEVLQSCIEEAAKAAKPALERCIEDAVAALELAQSQSASAAEREELTAACRALLEHKTNWSTQYRADLLVVFRTQAA EAAQATLTPAGVSPRSPGVASTSSLSSIEAFSLVEDADVSLAIESSRLLQLVLPAVEQSLAELNTLISAVQGLPNVRPEL NPLRPEVFAQTLQQMIFAAPVDRAVCTLWIKYLAAPLGRELKLVYERLINQLELANVQGAGYRVLQTPASGGSKSRGNPQ TGTGQGAGRAEESFRPPPVGYVSDEPLRPSQFADLTDPEVKSDLFHDFLFNGASNAQRGLAPAYYDSIEEELKALKAARE TAQAPLESRSAPLSGYQKVPAVDRPQRVVDERSQLSQQVWGAYGRPRERDIVRTQLKKEARQVGQVMGLEVVRKLVSHVA QDPRLLAPVREAIVALEPSLMRLAMVDPHFFSDEDHPGRRLMERVAQRSFSYNDEFSTEFSEFLQPVIRAFNKLNGRDIQ DAQPFDSALATLAQHWDEQDQFEAKNRDNLLQALRFAEERQTLADEIALELSRRSDLGDVPALVLDFLFESWALAMAHAR LTDTRNQVDPEGFGSVVPDLLWSVKREVTLKRPAKLFEMLPGLLGKLHAGLALLGQDPRESETFFEELMKLHRPVLKLRR LKSQRDAEESGAMPLEPEEAPAPTFITDTSTEPRQARSAAPPWLGRDDLDAAGFEDTLPTAPGELAPLEDDTPAVAESAT TDDPAGTPETQPAQQQGVPSPATGPAIAPAEAERLLRGLQAGHWVDLYSKHRWLRAQLIWAGTKGTLFMFVSHGGQPHSM TRRSCERLIRDRLLRPVDTQGVVGQALDALALEADASAGAPGDVSAPADLMNA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 93431; Mature: 93300
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: PS00888 CNMP_BINDING_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASQPEVLQSCIEEAAKAAKPALERCIEDAVAALELAQSQSASAAEREELTAACRALLEH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH KTNWSTQYRADLLVVFRTQAAEAAQATLTPAGVSPRSPGVASTSSLSSIEAFSLVEDADV CCCCCHHHHHHEEEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC SLAIESSRLLQLVLPAVEQSLAELNTLISAVQGLPNVRPELNPLRPEVFAQTLQQMIFAA EEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHC PVDRAVCTLWIKYLAAPLGRELKLVYERLINQLELANVQGAGYRVLQTPASGGSKSRGNP CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCC QTGTGQGAGRAEESFRPPPVGYVSDEPLRPSQFADLTDPEVKSDLFHDFLFNGASNAQRG CCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHC LAPAYYDSIEEELKALKAARETAQAPLESRSAPLSGYQKVPAVDRPQRVVDERSQLSQQV CCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHH WGAYGRPRERDIVRTQLKKEARQVGQVMGLEVVRKLVSHVAQDPRLLAPVREAIVALEPS HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHH LMRLAMVDPHFFSDEDHPGRRLMERVAQRSFSYNDEFSTEFSEFLQPVIRAFNKLNGRDI HHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC QDAQPFDSALATLAQHWDEQDQFEAKNRDNLLQALRFAEERQTLADEIALELSRRSDLGD CCCCHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC VPALVLDFLFESWALAMAHARLTDTRNQVDPEGFGSVVPDLLWSVKREVTLKRPAKLFEM HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LPGLLGKLHAGLALLGQDPRESETFFEELMKLHRPVLKLRRLKSQRDAEESGAMPLEPEE HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCC APAPTFITDTSTEPRQARSAAPPWLGRDDLDAAGFEDTLPTAPGELAPLEDDTPAVAESA CCCCCEEECCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCC TTDDPAGTPETQPAQQQGVPSPATGPAIAPAEAERLLRGLQAGHWVDLYSKHRWLRAQLI CCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEE WAGTKGTLFMFVSHGGQPHSMTRRSCERLIRDRLLRPVDTQGVVGQALDALALEADASAG EECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCC APGDVSAPADLMNA CCCCCCCCHHHHCC >Mature Secondary Structure ASQPEVLQSCIEEAAKAAKPALERCIEDAVAALELAQSQSASAAEREELTAACRALLEH CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH KTNWSTQYRADLLVVFRTQAAEAAQATLTPAGVSPRSPGVASTSSLSSIEAFSLVEDADV CCCCCHHHHHHEEEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC SLAIESSRLLQLVLPAVEQSLAELNTLISAVQGLPNVRPELNPLRPEVFAQTLQQMIFAA EEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHC PVDRAVCTLWIKYLAAPLGRELKLVYERLINQLELANVQGAGYRVLQTPASGGSKSRGNP CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCC QTGTGQGAGRAEESFRPPPVGYVSDEPLRPSQFADLTDPEVKSDLFHDFLFNGASNAQRG CCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHC LAPAYYDSIEEELKALKAARETAQAPLESRSAPLSGYQKVPAVDRPQRVVDERSQLSQQV CCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHH WGAYGRPRERDIVRTQLKKEARQVGQVMGLEVVRKLVSHVAQDPRLLAPVREAIVALEPS HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHH LMRLAMVDPHFFSDEDHPGRRLMERVAQRSFSYNDEFSTEFSEFLQPVIRAFNKLNGRDI HHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC QDAQPFDSALATLAQHWDEQDQFEAKNRDNLLQALRFAEERQTLADEIALELSRRSDLGD CCCCHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC VPALVLDFLFESWALAMAHARLTDTRNQVDPEGFGSVVPDLLWSVKREVTLKRPAKLFEM HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LPGLLGKLHAGLALLGQDPRESETFFEELMKLHRPVLKLRRLKSQRDAEESGAMPLEPEE HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCC APAPTFITDTSTEPRQARSAAPPWLGRDDLDAAGFEDTLPTAPGELAPLEDDTPAVAESA CCCCCEEECCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCC TTDDPAGTPETQPAQQQGVPSPATGPAIAPAEAERLLRGLQAGHWVDLYSKHRWLRAQLI CCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEE WAGTKGTLFMFVSHGGQPHSMTRRSCERLIRDRLLRPVDTQGVVGQALDALALEADASAG EECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCC APGDVSAPADLMNA CCCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA