| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91790342
Identifier: 91790342
GI number: 91790342
Start: 4764929
End: 4766254
Strand: Direct
Name: 91790342
Synonym: Bpro_4510
Alternate gene names: NA
Gene position: 4764929-4766254 (Clockwise)
Preceding gene: 91790341
Following gene: 91790347
Centisome position: 91.63
GC content: 67.95
Gene sequence:
>1326_bases ATGCGAGTTCACCGCTTTCTTTCATTCCTCGCTCCGTTGCTGGCCGTCGGCTTCATCGCCACGGCGCCGCAGCCTGCAGG TGCGCAGCCCAAGGCGCGCTTTGCGCCGGAGATCAGCAGCTTCCAGGTCGACGTGACCGACCAGCTTGCACCCGGCAGCG ACCTCAGCTTCACGCTGGAAGGCTCGCCGCGCGGGCAGGCCAGCGTCCGGCTGAGCGGCATCAACAAAAACATCGTGCTG CGCGAAGTCGAGCGCGGTGTTTATGAAGGCTCCTACACGTTGAGCCGGCGCGACCGGCTCGGCCCGCAGCCGACCGCGAC CGCCACCCTGCGTGTGCGTAATGCCTCCAAGGTCGTGACCCAGGCCTTGGCCGCAGGCCCGCCCCCGGTGGCCAGCCCGC CGCCGCCTCCCGCCGCCCCACCCCTGGCGATCGAACGCTTCACCGTCACACCGGTGGCCCGCATCGAGCCCGGCGCCGAA CTGCGCTTTGCCGCTGTCGGTACACCCGGCGCGCGCGCCACGCTGAGCATCGACGGCGTGGTGCAGGGCGTGCCCATGCA GGAGGTGCGCCCGGGCCGCTATGAAGGCGCCTACACCATACGCCGCAACGACAACTTCCCGCCCTCGCTCAACATCGTCG CCACCCTGGAGGGCAACGGCCAGACGATCCGCTCGCGGCTGAACCAGGCGCTGCTGGTGGACGCCCGCCCGCCCACCGTG CGAAACCTTGCACCGCAAAACAATGAGACCGTCGCAAGCGGCCCGGTGTCGGTGTCCGCAACGTTTGATGACAGCGGCGG TGTCGGCGTGGACCCCAAGACCGTGAAGATCATGATCGGCGGCCAGGACGTGACGCGCAATGCCAGCATCACGCCCCAGT TCCTGACCTGGCGCGGCGATTTGCGGCCCGGCGCCCACTCGGTGGAAGTCACCGCTGCCGACATGGCCGGCAATGCCGTG CGCCAGACCTGGGTGTTCAATGTGGCCAGCCCGCAAACCCCGCCGCCGGCCGCCATGCTGCCCCTGCAGATCACCAGCCA CGCCAACAATGCACAGATCAGCAGCGGCACCGTCGAGGTACGCGGGCGCACCGCCCCGGATACCAAGGTGGAGGTGCAGG TCCAGGTGATCGCCTCGGTGGCCGGCTTTTTCGGCATCAACCAGCAGGTGCTGAACCAGACCCTGCGTTCGGATGCCGGC GGCAACTTTGTTTTCAGCTTCAAGCCGCAAGTGACCGTACCCGGCGCGCGCTACGAAGCCACCATCACGGCGACCAGAGG CGACCAGCACAACGAGACCCGGCTGGTGCTGTTCCAGCAACGTTGA
Upstream 100 bases:
>100_bases ATGGCCGGGCACTACGCTCACGCCCTGTCCGGTCATGCGCCTACGTCCGACGGACCGGCTGCCAGTTACAAAGGAGTAAC TTCATCCGTAAAGGTTGGCC
Downstream 100 bases:
>100_bases GATCAAGGAATTTGCAGCGGAAGCAGGCCCTGCGCGGGCCGTTCCGGGCAAACAGGGAAGCGGGGTGACGTGCGCCGTCG AACGGAACCGCATGCGGATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 441; Mature: 441
Protein sequence:
>441_residues MRVHRFLSFLAPLLAVGFIATAPQPAGAQPKARFAPEISSFQVDVTDQLAPGSDLSFTLEGSPRGQASVRLSGINKNIVL REVERGVYEGSYTLSRRDRLGPQPTATATLRVRNASKVVTQALAAGPPPVASPPPPPAAPPLAIERFTVTPVARIEPGAE LRFAAVGTPGARATLSIDGVVQGVPMQEVRPGRYEGAYTIRRNDNFPPSLNIVATLEGNGQTIRSRLNQALLVDARPPTV RNLAPQNNETVASGPVSVSATFDDSGGVGVDPKTVKIMIGGQDVTRNASITPQFLTWRGDLRPGAHSVEVTAADMAGNAV RQTWVFNVASPQTPPPAAMLPLQITSHANNAQISSGTVEVRGRTAPDTKVEVQVQVIASVAGFFGINQQVLNQTLRSDAG GNFVFSFKPQVTVPGARYEATITATRGDQHNETRLVLFQQR
Sequences:
>Translated_441_residues MRVHRFLSFLAPLLAVGFIATAPQPAGAQPKARFAPEISSFQVDVTDQLAPGSDLSFTLEGSPRGQASVRLSGINKNIVL REVERGVYEGSYTLSRRDRLGPQPTATATLRVRNASKVVTQALAAGPPPVASPPPPPAAPPLAIERFTVTPVARIEPGAE LRFAAVGTPGARATLSIDGVVQGVPMQEVRPGRYEGAYTIRRNDNFPPSLNIVATLEGNGQTIRSRLNQALLVDARPPTV RNLAPQNNETVASGPVSVSATFDDSGGVGVDPKTVKIMIGGQDVTRNASITPQFLTWRGDLRPGAHSVEVTAADMAGNAV RQTWVFNVASPQTPPPAAMLPLQITSHANNAQISSGTVEVRGRTAPDTKVEVQVQVIASVAGFFGINQQVLNQTLRSDAG GNFVFSFKPQVTVPGARYEATITATRGDQHNETRLVLFQQR >Mature_441_residues MRVHRFLSFLAPLLAVGFIATAPQPAGAQPKARFAPEISSFQVDVTDQLAPGSDLSFTLEGSPRGQASVRLSGINKNIVL REVERGVYEGSYTLSRRDRLGPQPTATATLRVRNASKVVTQALAAGPPPVASPPPPPAAPPLAIERFTVTPVARIEPGAE LRFAAVGTPGARATLSIDGVVQGVPMQEVRPGRYEGAYTIRRNDNFPPSLNIVATLEGNGQTIRSRLNQALLVDARPPTV RNLAPQNNETVASGPVSVSATFDDSGGVGVDPKTVKIMIGGQDVTRNASITPQFLTWRGDLRPGAHSVEVTAADMAGNAV RQTWVFNVASPQTPPPAAMLPLQITSHANNAQISSGTVEVRGRTAPDTKVEVQVQVIASVAGFFGINQQVLNQTLRSDAG GNFVFSFKPQVTVPGARYEATITATRGDQHNETRLVLFQQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46832; Mature: 46832
Theoretical pI: Translated: 10.75; Mature: 10.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVHRFLSFLAPLLAVGFIATAPQPAGAQPKARFAPEISSFQVDVTDQLAPGSDLSFTLE CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEHHCCCCCCCCEEEEC GSPRGQASVRLSGINKNIVLREVERGVYEGSYTLSRRDRLGPQPTATATLRVRNASKVVT CCCCCCEEEEEECCCCCEEEEEHHCCCCCCCEEECHHHCCCCCCCCEEEEEECCHHHHHH QALAAGPPPVASPPPPPAAPPLAIERFTVTPVARIEPGAELRFAAVGTPGARATLSIDGV HHHHCCCCCCCCCCCCCCCCCCEEEEEEECCHHCCCCCCCEEEEEECCCCCEEEEEECCE VQGVPMQEVRPGRYEGAYTIRRNDNFPPSLNIVATLEGNGQTIRSRLNQALLVDARPPTV EECCCHHHCCCCCCCCEEEEEECCCCCCCEEEEEEEECCCHHHHHHCCCEEEEECCCCHH RNLAPQNNETVASGPVSVSATFDDSGGVGVDPKTVKIMIGGQDVTRNASITPQFLTWRGD HCCCCCCCCEEECCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEECC LRPGAHSVEVTAADMAGNAVRQTWVFNVASPQTPPPAAMLPLQITSHANNAQISSGTVEV CCCCCCEEEEEEHHHCCCCEEEEEEEEECCCCCCCCCEEEEEEEECCCCCCEECCCEEEE RGRTAPDTKVEVQVQVIASVAGFFGINQQVLNQTLRSDAGGNFVFSFKPQVTVPGARYEA ECCCCCCCEEEEEEEEEHHHHHHHCCCHHHHHHHHHCCCCCCEEEEECCCEECCCCCEEE TITATRGDQHNETRLVLFQQR EEEEECCCCCCCEEEEEEECC >Mature Secondary Structure MRVHRFLSFLAPLLAVGFIATAPQPAGAQPKARFAPEISSFQVDVTDQLAPGSDLSFTLE CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEHHCCCCCCCCEEEEC GSPRGQASVRLSGINKNIVLREVERGVYEGSYTLSRRDRLGPQPTATATLRVRNASKVVT CCCCCCEEEEEECCCCCEEEEEHHCCCCCCCEEECHHHCCCCCCCCEEEEEECCHHHHHH QALAAGPPPVASPPPPPAAPPLAIERFTVTPVARIEPGAELRFAAVGTPGARATLSIDGV HHHHCCCCCCCCCCCCCCCCCCEEEEEEECCHHCCCCCCCEEEEEECCCCCEEEEEECCE VQGVPMQEVRPGRYEGAYTIRRNDNFPPSLNIVATLEGNGQTIRSRLNQALLVDARPPTV EECCCHHHCCCCCCCCEEEEEECCCCCCCEEEEEEEECCCHHHHHHCCCEEEEECCCCHH RNLAPQNNETVASGPVSVSATFDDSGGVGVDPKTVKIMIGGQDVTRNASITPQFLTWRGD HCCCCCCCCEEECCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEECC LRPGAHSVEVTAADMAGNAVRQTWVFNVASPQTPPPAAMLPLQITSHANNAQISSGTVEV CCCCCCEEEEEEHHHCCCCEEEEEEEEECCCCCCCCCEEEEEEEECCCCCCEECCCEEEE RGRTAPDTKVEVQVQVIASVAGFFGINQQVLNQTLRSDAGGNFVFSFKPQVTVPGARYEA ECCCCCCCEEEEEEEEEHHHHHHHCCCHHHHHHHHHCCCCCCEEEEECCCEECCCCCEEE TITATRGDQHNETRLVLFQQR EEEEECCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA