| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is dehH1 [H]
Identifier: 91790310
GI number: 91790310
Start: 4733476
End: 4734429
Strand: Direct
Name: dehH1 [H]
Synonym: Bpro_4478
Alternate gene names: 91790310
Gene position: 4733476-4734429 (Clockwise)
Preceding gene: 91790309
Following gene: 91790311
Centisome position: 91.02
GC content: 65.83
Gene sequence:
>954_bases ATGACCTGGTTTGACGGCTTTGAGTCGCGCAGCTTCGAAGTCAACGGGGCCTCCATCCAGGCGCGCTTCTCCAGGGTGGC GCTCGGCGATGCGCCGCGCCCGGCGCTGCTGCTGATCCACGGCTTTCCGCAGTCGCATGTGATGTGGCACCGGGTCGCGC AGCGCCTCGCCCAGCACTACTTCCTGGTGATGCCCGACCTGCGCGGCTACGGCGACTCGTCCAAAACACCGGGCCTGCCC GACCACAGCAACTACAGCAAGCGCAACATGGCCCACGACATGGTGGCGGTGATGAGCGCCCTCGGTGTGGACCGCTTTTT TCTGTGCGGCCACGACCGCGGCGCGCGGGTGGCGCACCGGTTGGCGCTGGACCATGCAGCCCGCGTGATAAAACTCTGCG TCATCGACGTTGCCCCGACGCTGGACATGTACGAGGGCCGCGGCATGACCGAGCCCTACATGGCGTTTGCCCAAGCCTAC TACCACTGGTTTCACATGCTGCAGCCGGCCCCGCTGCCGGAAATCATGATGGGCGCCAACCACCTGGAAACAGCCAAAGC CTATCTGCACGCCAAACTGGGCGGCTGGGGCAGCTCCGGACTCGGCTACATAGAACCGGAGGCGCTGGCCGAATACGAGC GCTGCTTCTGCAACGCCGAAGCGCTGCACACGGCCTGCGAAGACTACCGCGCCAGCGCCCGCATCGACCTGGAGCACGAC CGTGAAAGCCGCGCGCACGGCCTCAAGGTGGCCTGCGACATGCTGGTGCTCAGCGGTGAACGCGGCGTGGTGCACCGGCT CTTCAACCCGATGGCGCTGTGGCAGGAGCAATGCAGCGGCATCGTGGCCGGGCATACCCTGCAGGCGGGGCATTTCATTC CCGAAGAGCAGCCCCAGGCGGTGGCGCAGGCCCTGCTGGAGTTCTTTGCTTTGCCTGAGCTGGATCGGGTTTGA
Upstream 100 bases:
>100_bases CCGGCCTGCTGCTGGGCTGGACAGCGTTTCTGCGCCGCAAAGTCAGGGCCCAGGCGGCGGCAAATCTGCAAAAATACCTG ACATCACACGGGAGTTGAAC
Downstream 100 bases:
>100_bases ACATGGCTCACTACACCGCAGAAGTTTTATGGTTGCGCAACGACGGCGATTTTCTGGGCAACCACTACAGCCGCCGCCAT TTGCTGCGTTTTGACGGCGG
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 317; Mature: 316
Protein sequence:
>317_residues MTWFDGFESRSFEVNGASIQARFSRVALGDAPRPALLLIHGFPQSHVMWHRVAQRLAQHYFLVMPDLRGYGDSSKTPGLP DHSNYSKRNMAHDMVAVMSALGVDRFFLCGHDRGARVAHRLALDHAARVIKLCVIDVAPTLDMYEGRGMTEPYMAFAQAY YHWFHMLQPAPLPEIMMGANHLETAKAYLHAKLGGWGSSGLGYIEPEALAEYERCFCNAEALHTACEDYRASARIDLEHD RESRAHGLKVACDMLVLSGERGVVHRLFNPMALWQEQCSGIVAGHTLQAGHFIPEEQPQAVAQALLEFFALPELDRV
Sequences:
>Translated_317_residues MTWFDGFESRSFEVNGASIQARFSRVALGDAPRPALLLIHGFPQSHVMWHRVAQRLAQHYFLVMPDLRGYGDSSKTPGLP DHSNYSKRNMAHDMVAVMSALGVDRFFLCGHDRGARVAHRLALDHAARVIKLCVIDVAPTLDMYEGRGMTEPYMAFAQAY YHWFHMLQPAPLPEIMMGANHLETAKAYLHAKLGGWGSSGLGYIEPEALAEYERCFCNAEALHTACEDYRASARIDLEHD RESRAHGLKVACDMLVLSGERGVVHRLFNPMALWQEQCSGIVAGHTLQAGHFIPEEQPQAVAQALLEFFALPELDRV >Mature_316_residues TWFDGFESRSFEVNGASIQARFSRVALGDAPRPALLLIHGFPQSHVMWHRVAQRLAQHYFLVMPDLRGYGDSSKTPGLPD HSNYSKRNMAHDMVAVMSALGVDRFFLCGHDRGARVAHRLALDHAARVIKLCVIDVAPTLDMYEGRGMTEPYMAFAQAYY HWFHMLQPAPLPEIMMGANHLETAKAYLHAKLGGWGSSGLGYIEPEALAEYERCFCNAEALHTACEDYRASARIDLEHDR ESRAHGLKVACDMLVLSGERGVVHRLFNPMALWQEQCSGIVAGHTLQAGHFIPEEQPQAVAQALLEFFALPELDRV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily. Epoxide hydrolase family [H]
Homologues:
Organism=Homo sapiens, GI218777837, Length=296, Percent_Identity=26.0135135135135, Blast_Score=88, Evalue=1e-17, Organism=Homo sapiens, GI218777840, Length=298, Percent_Identity=24.1610738255034, Blast_Score=75, Evalue=8e-14, Organism=Homo sapiens, GI13376164, Length=298, Percent_Identity=24.1610738255034, Blast_Score=75, Evalue=8e-14, Organism=Caenorhabditis elegans, GI17554012, Length=192, Percent_Identity=28.125, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17562298, Length=175, Percent_Identity=25.1428571428571, Blast_Score=68, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR000639 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.8.1.3 [H]
Molecular weight: Translated: 35471; Mature: 35340
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTWFDGFESRSFEVNGASIQARFSRVALGDAPRPALLLIHGFPQSHVMWHRVAQRLAQHY CCCCCCCCCCEEEECCCHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHE FLVMPDLRGYGDSSKTPGLPDHSNYSKRNMAHDMVAVMSALGVDRFFLCGHDRGARVAHR EEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHH LALDHAARVIKLCVIDVAPTLDMYEGRGMTEPYMAFAQAYYHWFHMLQPAPLPEIMMGAN HHHHHHHHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHCCC HLETAKAYLHAKLGGWGSSGLGYIEPEALAEYERCFCNAEALHTACEDYRASARIDLEHD HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEECCCC RESRAHGLKVACDMLVLSGERGVVHRLFNPMALWQEQCSGIVAGHTLQAGHFIPEEQPQA HHHHHCCHHHHHHHHEECCCCCHHHHHHCHHHHHHHHHCCEEECCEECCCCCCCCCCHHH VAQALLEFFALPELDRV HHHHHHHHHCCCCCCCC >Mature Secondary Structure TWFDGFESRSFEVNGASIQARFSRVALGDAPRPALLLIHGFPQSHVMWHRVAQRLAQHY CCCCCCCCCEEEECCCHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHE FLVMPDLRGYGDSSKTPGLPDHSNYSKRNMAHDMVAVMSALGVDRFFLCGHDRGARVAHR EEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHH LALDHAARVIKLCVIDVAPTLDMYEGRGMTEPYMAFAQAYYHWFHMLQPAPLPEIMMGAN HHHHHHHHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHCCC HLETAKAYLHAKLGGWGSSGLGYIEPEALAEYERCFCNAEALHTACEDYRASARIDLEHD HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEECCCC RESRAHGLKVACDMLVLSGERGVVHRLFNPMALWQEQCSGIVAGHTLQAGHFIPEEQPQA HHHHHCCHHHHHHHHEECCCCCHHHHHHCHHHHHHHHHCCEEECCEECCCCCCCCCCHHH VAQALLEFFALPELDRV HHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1512562 [H]