| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91790301
Identifier: 91790301
GI number: 91790301
Start: 4722986
End: 4724959
Strand: Direct
Name: 91790301
Synonym: Bpro_4468
Alternate gene names: NA
Gene position: 4722986-4724959 (Clockwise)
Preceding gene: 91790300
Following gene: 91790302
Centisome position: 90.82
GC content: 66.16
Gene sequence:
>1974_bases ATGAAAGACCTGCCCACCCTGCTCGGTGCGCTGGACCCTGAGGCCGACCTGACCGGGCGCCACGTGTGGCTGATCAGCCT GTTCGCGTGGATCCGCGGTGACCAGACGTCCGTCGCGGCCGCGGTGGCGCGGGTTCAGGCCTTTCTGGAGGCGGTCGAGG CCCAGCCGGAATTTCAGCGGCGCCTGCAGGCCTGGTGGCAACAACTGATACAGACCCTGGACATCACCACCTTGCTGGCG GACTTTGGCTTTGCGCCCCGCACGGCTTTTGTCAGCGAACTCGGCGAGCGCCTGCGCCGCAAGATGCTGCCAGGCACGCC GGAAACCTCCGACGCGTCGGAGTTGTTCCCGCTGGTGGCATCGCGGCGTTTTGATGCCCAGTGGATGGCTGCCCTGGAAG AGCCGCAAATCGAGCGGCTGGCCCGCCTGCTCTCGGCCAACCCTCAACTGGACACACTGCACTGGCAGTACAGCCTGGTG GACGCCCTGACCTACTGCACGGCGCAGATCCGTGCCACCGGTTTCGCGCCGGAATTGCGGCTGCGCATGGACCGGGCTAC GCCCCACGCGCGGGCTTTTCATGCCTTGCCTTCCGACGTCGAGGAACTGCGCAGCATTTTTTTCAGACCCGAACGCGACG AGGCGCAACTTCAGGCCGCGCTCACGCAGTACCGCGGACGGCTCGACGCCTGCCGCCAGGCGGTCAACAGCGTCTATGCG CACATCGAGGAGAACGGCATCTCGGTCGGCATGGTGTTCCGGCTGCGCCAGCTGCGCGAGCGCATGATGCGCGTGCGGGA ACTGCTGGACGCCCTGCTCTCGCCCAAGCCGGCCATGGCCGCGCTCAAGCTGCTGGTGCGGCGGGTGATCATCGGACACG ACAGTAAAAGCATAGGCGCGCTGATCAGCGCCAATTCCACCTTGCTGTCCGCCAAGATGGCCGAGCGCAGCGCCGAGACC GGCGAGCGCTACATCACGCGCAACCGCGAGGAATACCGCGAGATGCTGGGCAAGGCGATGGGCGGCGGTGCGGTCACGGC CTTCACCACGCTGCTCAAATTCATGGTGGTGGGCATCGGACTGTCGGCTTTCTGGAGCGGCTTCTGGGCCAGCGTGGCCT ACGCCGGCACCTTCGTCATGATCCAGCTGCTGCATTTCACGCTGGCCACCAAGCAACCGGCGATGACAGCGCCCGCCATG GCCGCCAAGCTCAAGGACATCGGATCGGCCGAGGCCACGAATGCCGTGGAGGATTTTGTCGATGAGGTGACGCACCTGGT GCGCTCGCAGGTAGCGGCCGTGTTCGGCAATGTGTTCATGGTCGTGCCGGCCGTGCTGCTGATCAACGCGCTGATCCTGC TGCTGCTGGGCCATCCGATGATCAGCCACGATGAGGCCCGCCATATCCTGGCCACGCTGACCCTGCTGGGCCCGACGCTG CTCTGGGCGGCCTTCACCGGTGTGCTGCTGTTTTCCGCCAGCATGATCGCCGGCTGGGCCGAGAACTGGTTTGTACTGCA CCGCCTCGACTCGGCGATGCGCCACAATCCGCGCTTCACCAGCGCGCTGGGCACCGAACGGGCCGCCCGCTGGTCTGCCT TTATGCGCGAGAACATCTCCGGCTTTGCCTCCAACATCGCGCTGGGCTTCATGCTGGGACTGATCCCGGCGTTCACCGGC TTCTTCGGCGTCGAGCTCGAAGCACGCCACGTCACCCTGTCCACGGGGCAGCTCGCGGCAGCCGGCGCCTCGCTCGGTCT TGAGGCCTTCAGGTTCCCGGCGATCTGGTGGTGCATGGCCGCGATTCCCCTGATTGGCGCATTGAACCTCGGCGTGAGCT TCTACCTCGCCTTCCGCCTGGCCCTGCAGGCGCACAACGTCAGCGGTGTGGACCGCGCCCGCATCCGCGCAGCCATCTGG GCCCGCTGGCGCACCCATCCGCGCAGCTTTTTCATGCCAGCGCAGTACCGTTGA
Upstream 100 bases:
>100_bases CGGAAGACGGCACGCGGTTTGAGGTCGCCATCCCCATGTTTGTGCTGGAGGCACACCAGGGGGGCAATCCGGCCGGCCGC GTCCTGCATTGAACCGGCTG
Downstream 100 bases:
>100_bases CAGCAAACCGGCAACTACCCGCCAGCCACCCGGCGATTTCAGGTCTTGTCCTACAGGACAGGCGCCATGACACCTGTAAA TTAGTGCAACGCATCGTTGC
Product: putative site-specific recombinase transmembrane protein
Products: NA
Alternate protein names: Site-Specific Recombinase Transmembrane Protein; Site-Specific Recombinase Gcr; Site-Specific Recombinase Prophage Insertion; Site-Specific Recombinase-Like Protein; Site-Specific Recombinase Protein Gcr; Adventurous Gliding Motility Protein AgmG; Adventurous Gliding Motility Protein
Number of amino acids: Translated: 657; Mature: 657
Protein sequence:
>657_residues MKDLPTLLGALDPEADLTGRHVWLISLFAWIRGDQTSVAAAVARVQAFLEAVEAQPEFQRRLQAWWQQLIQTLDITTLLA DFGFAPRTAFVSELGERLRRKMLPGTPETSDASELFPLVASRRFDAQWMAALEEPQIERLARLLSANPQLDTLHWQYSLV DALTYCTAQIRATGFAPELRLRMDRATPHARAFHALPSDVEELRSIFFRPERDEAQLQAALTQYRGRLDACRQAVNSVYA HIEENGISVGMVFRLRQLRERMMRVRELLDALLSPKPAMAALKLLVRRVIIGHDSKSIGALISANSTLLSAKMAERSAET GERYITRNREEYREMLGKAMGGGAVTAFTTLLKFMVVGIGLSAFWSGFWASVAYAGTFVMIQLLHFTLATKQPAMTAPAM AAKLKDIGSAEATNAVEDFVDEVTHLVRSQVAAVFGNVFMVVPAVLLINALILLLLGHPMISHDEARHILATLTLLGPTL LWAAFTGVLLFSASMIAGWAENWFVLHRLDSAMRHNPRFTSALGTERAARWSAFMRENISGFASNIALGFMLGLIPAFTG FFGVELEARHVTLSTGQLAAAGASLGLEAFRFPAIWWCMAAIPLIGALNLGVSFYLAFRLALQAHNVSGVDRARIRAAIW ARWRTHPRSFFMPAQYR
Sequences:
>Translated_657_residues MKDLPTLLGALDPEADLTGRHVWLISLFAWIRGDQTSVAAAVARVQAFLEAVEAQPEFQRRLQAWWQQLIQTLDITTLLA DFGFAPRTAFVSELGERLRRKMLPGTPETSDASELFPLVASRRFDAQWMAALEEPQIERLARLLSANPQLDTLHWQYSLV DALTYCTAQIRATGFAPELRLRMDRATPHARAFHALPSDVEELRSIFFRPERDEAQLQAALTQYRGRLDACRQAVNSVYA HIEENGISVGMVFRLRQLRERMMRVRELLDALLSPKPAMAALKLLVRRVIIGHDSKSIGALISANSTLLSAKMAERSAET GERYITRNREEYREMLGKAMGGGAVTAFTTLLKFMVVGIGLSAFWSGFWASVAYAGTFVMIQLLHFTLATKQPAMTAPAM AAKLKDIGSAEATNAVEDFVDEVTHLVRSQVAAVFGNVFMVVPAVLLINALILLLLGHPMISHDEARHILATLTLLGPTL LWAAFTGVLLFSASMIAGWAENWFVLHRLDSAMRHNPRFTSALGTERAARWSAFMRENISGFASNIALGFMLGLIPAFTG FFGVELEARHVTLSTGQLAAAGASLGLEAFRFPAIWWCMAAIPLIGALNLGVSFYLAFRLALQAHNVSGVDRARIRAAIW ARWRTHPRSFFMPAQYR >Mature_657_residues MKDLPTLLGALDPEADLTGRHVWLISLFAWIRGDQTSVAAAVARVQAFLEAVEAQPEFQRRLQAWWQQLIQTLDITTLLA DFGFAPRTAFVSELGERLRRKMLPGTPETSDASELFPLVASRRFDAQWMAALEEPQIERLARLLSANPQLDTLHWQYSLV DALTYCTAQIRATGFAPELRLRMDRATPHARAFHALPSDVEELRSIFFRPERDEAQLQAALTQYRGRLDACRQAVNSVYA HIEENGISVGMVFRLRQLRERMMRVRELLDALLSPKPAMAALKLLVRRVIIGHDSKSIGALISANSTLLSAKMAERSAET GERYITRNREEYREMLGKAMGGGAVTAFTTLLKFMVVGIGLSAFWSGFWASVAYAGTFVMIQLLHFTLATKQPAMTAPAM AAKLKDIGSAEATNAVEDFVDEVTHLVRSQVAAVFGNVFMVVPAVLLINALILLLLGHPMISHDEARHILATLTLLGPTL LWAAFTGVLLFSASMIAGWAENWFVLHRLDSAMRHNPRFTSALGTERAARWSAFMRENISGFASNIALGFMLGLIPAFTG FFGVELEARHVTLSTGQLAAAGASLGLEAFRFPAIWWCMAAIPLIGALNLGVSFYLAFRLALQAHNVSGVDRARIRAAIW ARWRTHPRSFFMPAQYR
Specific function: Unknown
COG id: COG4389
COG function: function code L; Site-specific recombinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72935; Mature: 72935
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDLPTLLGALDPEADLTGRHVWLISLFAWIRGDQTSVAAAVARVQAFLEAVEAQPEFQR CCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHH RLQAWWQQLIQTLDITTLLADFGFAPRTAFVSELGERLRRKMLPGTPETSDASELFPLVA HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH SRRFDAQWMAALEEPQIERLARLLSANPQLDTLHWQYSLVDALTYCTAQIRATGFAPELR HCCCCHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHH LRMDRATPHARAFHALPSDVEELRSIFFRPERDEAQLQAALTQYRGRLDACRQAVNSVYA HHHHCCCCHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH HIEENGISVGMVFRLRQLRERMMRVRELLDALLSPKPAMAALKLLVRRVIIGHDSKSIGA HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHH LISANSTLLSAKMAERSAETGERYITRNREEYREMLGKAMGGGAVTAFTTLLKFMVVGIG HHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH LSAFWSGFWASVAYAGTFVMIQLLHFTLATKQPAMTAPAMAAKLKDIGSAEATNAVEDFV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHH DEVTHLVRSQVAAVFGNVFMVVPAVLLINALILLLLGHPMISHDEARHILATLTLLGPTL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH LWAAFTGVLLFSASMIAGWAENWFVLHRLDSAMRHNPRFTSALGTERAARWSAFMRENIS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH GFASNIALGFMLGLIPAFTGFFGVELEARHVTLSTGQLAAAGASLGLEAFRFPAIWWCMA HHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHHHHHHCHHHHHHHHHHHHHH AIPLIGALNLGVSFYLAFRLALQAHNVSGVDRARIRAAIWARWRTHPRSFFMPAQYR HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MKDLPTLLGALDPEADLTGRHVWLISLFAWIRGDQTSVAAAVARVQAFLEAVEAQPEFQR CCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHH RLQAWWQQLIQTLDITTLLADFGFAPRTAFVSELGERLRRKMLPGTPETSDASELFPLVA HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH SRRFDAQWMAALEEPQIERLARLLSANPQLDTLHWQYSLVDALTYCTAQIRATGFAPELR HCCCCHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHH LRMDRATPHARAFHALPSDVEELRSIFFRPERDEAQLQAALTQYRGRLDACRQAVNSVYA HHHHCCCCHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH HIEENGISVGMVFRLRQLRERMMRVRELLDALLSPKPAMAALKLLVRRVIIGHDSKSIGA HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHH LISANSTLLSAKMAERSAETGERYITRNREEYREMLGKAMGGGAVTAFTTLLKFMVVGIG HHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH LSAFWSGFWASVAYAGTFVMIQLLHFTLATKQPAMTAPAMAAKLKDIGSAEATNAVEDFV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHH DEVTHLVRSQVAAVFGNVFMVVPAVLLINALILLLLGHPMISHDEARHILATLTLLGPTL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH LWAAFTGVLLFSASMIAGWAENWFVLHRLDSAMRHNPRFTSALGTERAARWSAFMRENIS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH GFASNIALGFMLGLIPAFTGFFGVELEARHVTLSTGQLAAAGASLGLEAFRFPAIWWCMA HHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHHHHHHCHHHHHHHHHHHHHH AIPLIGALNLGVSFYLAFRLALQAHNVSGVDRARIRAAIWARWRTHPRSFFMPAQYR HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA