| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is mtrA [H]
Identifier: 91790297
GI number: 91790297
Start: 4719127
End: 4719879
Strand: Reverse
Name: mtrA [H]
Synonym: Bpro_4464
Alternate gene names: 91790297
Gene position: 4719879-4719127 (Counterclockwise)
Preceding gene: 91790298
Following gene: 91790296
Centisome position: 90.76
GC content: 61.09
Gene sequence:
>753_bases TTGGACTACACCGATGTTTACGGGGTTACTTCGAAAGGCGAACAGGAGCTGCGTGGTTCGGTCACCACCATTTCACCGCC CGAGGTCGAATTGCTGGTGCGACTTGACGGTGTTTTGACGCTGGCGCAGATTCGGCAGGGCATGAGTGCGGCGGCTCTCG AGACATTCGATGACACGCTCCGGATGCTGGTCTTCAAGAACCTTGCGGCGGTGGTCCATCCGGATTCCTTTGCCGCGTCG CGGCAGTTCCGGTTCAGCGCCATGGCGTTGACCCGGGCCAACGCTGAAGCCGATGCCTGCGCCGCGTCACTCAAGAACTC CAGCTACTACGTCCGGATTGCGCACAAGCGCGCGTTGCCTCCCCCGCGCGCTCCGGGGCAGCGCTTATCGGCCATTGTTG TGGATGACGACCCGCTTCTGTCCAGCTTCCTGAGCCAGTATCTGACTTTTGAAGGGTTTGATGTGCGGGTCGCCGGGTCT CGTGCCGAGGTCGTGGCCGAGTTTCGTAAACCGCCGAGGCCCGATCTCGTTCTTCTCGATGTGATGCTTCCCGATGCCGA TGGCTTTGACATTCTGCTCAGGATTCGTGCGCACCCGGCACTCAAGGATGTGCCCGTCATCATGCTGACAGCCAAGGCAA CCCGGGAGTCTGTTCTGAAAGGCCTGGCGGGGGGCGCCAATGGCTATGTCACCAAGCCCGTCGAGATCGATTCCCTGCTG GAGGCTGTGCGGACGGTGGTAGGGCCGCAGTAA
Upstream 100 bases:
>100_bases GCTTTGGGGAGTCGCTTGCGAATGGGCGGGCCCTCAAGCACCAGAATTTGACAGCACTCAGGCGCATGTCACGCCGTATG TCACGATAGGAGCCACTACC
Downstream 100 bases:
>100_bases TGCAGGCGCCGGGCGATCGGCGACCGACGCCAGCACCATCGGCCTGATGAGCTGAATAACACGTGTATAAACAGCCGATG CATCGTTTGATGCGGTGGTG
Product: response regulator receiver domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 250; Mature: 250
Protein sequence:
>250_residues MDYTDVYGVTSKGEQELRGSVTTISPPEVELLVRLDGVLTLAQIRQGMSAAALETFDDTLRMLVFKNLAAVVHPDSFAAS RQFRFSAMALTRANAEADACAASLKNSSYYVRIAHKRALPPPRAPGQRLSAIVVDDDPLLSSFLSQYLTFEGFDVRVAGS RAEVVAEFRKPPRPDLVLLDVMLPDADGFDILLRIRAHPALKDVPVIMLTAKATRESVLKGLAGGANGYVTKPVEIDSLL EAVRTVVGPQ
Sequences:
>Translated_250_residues MDYTDVYGVTSKGEQELRGSVTTISPPEVELLVRLDGVLTLAQIRQGMSAAALETFDDTLRMLVFKNLAAVVHPDSFAAS RQFRFSAMALTRANAEADACAASLKNSSYYVRIAHKRALPPPRAPGQRLSAIVVDDDPLLSSFLSQYLTFEGFDVRVAGS RAEVVAEFRKPPRPDLVLLDVMLPDADGFDILLRIRAHPALKDVPVIMLTAKATRESVLKGLAGGANGYVTKPVEIDSLL EAVRTVVGPQ >Mature_250_residues MDYTDVYGVTSKGEQELRGSVTTISPPEVELLVRLDGVLTLAQIRQGMSAAALETFDDTLRMLVFKNLAAVVHPDSFAAS RQFRFSAMALTRANAEADACAASLKNSSYYVRIAHKRALPPPRAPGQRLSAIVVDDDPLLSSFLSQYLTFEGFDVRVAGS RAEVVAEFRKPPRPDLVLLDVMLPDADGFDILLRIRAHPALKDVPVIMLTAKATRESVLKGLAGGANGYVTKPVEIDSLL EAVRTVVGPQ
Specific function: Member of the two-component regulatory system mtrA/mtrB [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1789809, Length=119, Percent_Identity=37.8151260504202, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1786784, Length=124, Percent_Identity=34.6774193548387, Blast_Score=68, Evalue=5e-13, Organism=Escherichia coli, GI1786599, Length=116, Percent_Identity=31.8965517241379, Blast_Score=68, Evalue=7e-13, Organism=Escherichia coli, GI1787229, Length=116, Percent_Identity=35.3448275862069, Blast_Score=67, Evalue=9e-13, Organism=Escherichia coli, GI1788394, Length=116, Percent_Identity=33.6206896551724, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1788550, Length=108, Percent_Identity=33.3333333333333, Blast_Score=64, Evalue=8e-12, Organism=Escherichia coli, GI1790860, Length=122, Percent_Identity=37.7049180327869, Blast_Score=62, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001867 - InterPro: IPR001789 - InterPro: IPR011991 [H]
Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]
EC number: NA
Molecular weight: Translated: 27095; Mature: 27095
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDYTDVYGVTSKGEQELRGSVTTISPPEVELLVRLDGVLTLAQIRQGMSAAALETFDDTL CCCCCCCCCCCCCHHHHCCCCEECCCCCEEEEEEHHHHHHHHHHHCCCHHHHHHHHHHHH RMLVFKNLAAVVHPDSFAASRQFRFSAMALTRANAEADACAASLKNSSYYVRIAHKRALP HHHHHHHHHHHCCCCCHHHHHHHHHHHHEEECCCCCHHHHHHHHCCCCEEEEEEECCCCC PPRAPGQRLSAIVVDDDPLLSSFLSQYLTFEGFDVRVAGSRAEVVAEFRKPPRPDLVLLD CCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHCCCCCCCEEEEE VMLPDADGFDILLRIRAHPALKDVPVIMLTAKATRESVLKGLAGGANGYVTKPVEIDSLL EECCCCCCCEEEEEEECCCCCCCCCEEEEECHHHHHHHHHHHCCCCCCEEECCCCHHHHH EAVRTVVGPQ HHHHHHHCCC >Mature Secondary Structure MDYTDVYGVTSKGEQELRGSVTTISPPEVELLVRLDGVLTLAQIRQGMSAAALETFDDTL CCCCCCCCCCCCCHHHHCCCCEECCCCCEEEEEEHHHHHHHHHHHCCCHHHHHHHHHHHH RMLVFKNLAAVVHPDSFAASRQFRFSAMALTRANAEADACAASLKNSSYYVRIAHKRALP HHHHHHHHHHHCCCCCHHHHHHHHHHHHEEECCCCCHHHHHHHHCCCCEEEEEEECCCCC PPRAPGQRLSAIVVDDDPLLSSFLSQYLTFEGFDVRVAGSRAEVVAEFRKPPRPDLVLLD CCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHCCCCCCCEEEEE VMLPDADGFDILLRIRAHPALKDVPVIMLTAKATRESVLKGLAGGANGYVTKPVEIDSLL EECCCCCCCEEEEEEECCCCCCCCCEEEEECHHHHHHHHHHHCCCCCCEEECCCCHHHHH EAVRTVVGPQ HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]