| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91790292
Identifier: 91790292
GI number: 91790292
Start: 4711895
End: 4712473
Strand: Direct
Name: 91790292
Synonym: Bpro_4459
Alternate gene names: NA
Gene position: 4711895-4712473 (Clockwise)
Preceding gene: 91790291
Following gene: 91790294
Centisome position: 90.61
GC content: 61.14
Gene sequence:
>579_bases TTGTATAAGCAGTGCATCACCGGCCTGGCCGGGCTGGTGCTGTCACTTGGCGTGCTGGCCGCGCCGGTGGAAATTTCGGG GGTCAAACTGGAGGACGCGCTGGACCTTCAGGGCACGAAACTCCAGCTCAATGGCGCGGGCATCCGCTACAAGGCGGTGT TCAAGGTCTATGTGGCGGGCCTGTACCTGGGCAAGAAGGCCGCCACGCCGGAAGAGGTGTACGCGGCACCGGGCCCCAAG CGCCTGAGCATCACGCTGCTGCGCGAGATTGATTCCAACGAGCTTGGCAAGGCATTCACCAAGGGCATTGAAGACAACAC GCCCAAGGGCGAGATGTCCAGGCTGATCCCGGGCCTGATCAGGATGGGCCAGATCTTTGCCGACCAGAAAAAGCTGCTGC CCGGCGAAAATTTCACCATTGACTGGATTCCCGGCACGGGCACGGTGCTCACCGTCAAGGGCAAGCAGCAGGGCGAGCCG TTCCGGGAAATTGAATTTTTCAATGCCCTGATGCGCATCTGGCTGGGCCCGCAACCCGCAGACTGGAGGCTGAAAGAGGC CCTGCTGAGTAAAGGCTGA
Upstream 100 bases:
>100_bases TATAGCCGCCAGCGCGTCGCGGGCTTGAAAATAGCCCCACAAAAAAGAACGACCGTTCTATTTAACCCCGTTGGAGACTT TCATGACTTTGCCTTTGTCT
Downstream 100 bases:
>100_bases AAGCGATGTGCTGACCGCCTCCCGGTCGGCACACCTCTTCAGCGACCGGCTTGACGCCCGACGCTTAAATCGCGACACCC GCGGTGCTCGCCAGGTATTT
Product: putative lipoprotein transmembrane
Products: NA
Alternate protein names: Chalcone Isomerase; Transmembrane; Chalcone Isomerase Subgroup; Lipoprotein; Exported Protein
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MYKQCITGLAGLVLSLGVLAAPVEISGVKLEDALDLQGTKLQLNGAGIRYKAVFKVYVAGLYLGKKAATPEEVYAAPGPK RLSITLLREIDSNELGKAFTKGIEDNTPKGEMSRLIPGLIRMGQIFADQKKLLPGENFTIDWIPGTGTVLTVKGKQQGEP FREIEFFNALMRIWLGPQPADWRLKEALLSKG
Sequences:
>Translated_192_residues MYKQCITGLAGLVLSLGVLAAPVEISGVKLEDALDLQGTKLQLNGAGIRYKAVFKVYVAGLYLGKKAATPEEVYAAPGPK RLSITLLREIDSNELGKAFTKGIEDNTPKGEMSRLIPGLIRMGQIFADQKKLLPGENFTIDWIPGTGTVLTVKGKQQGEP FREIEFFNALMRIWLGPQPADWRLKEALLSKG >Mature_192_residues MYKQCITGLAGLVLSLGVLAAPVEISGVKLEDALDLQGTKLQLNGAGIRYKAVFKVYVAGLYLGKKAATPEEVYAAPGPK RLSITLLREIDSNELGKAFTKGIEDNTPKGEMSRLIPGLIRMGQIFADQKKLLPGENFTIDWIPGTGTVLTVKGKQQGEP FREIEFFNALMRIWLGPQPADWRLKEALLSKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20958; Mature: 20958
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: PS00962 RIBOSOMAL_S2_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYKQCITGLAGLVLSLGVLAAPVEISGVKLEDALDLQGTKLQLNGAGIRYKAVFKVYVAG CHHHHHHHHHHHHHHHHHHHCCCEECCEEECCCCCCCCCEEEECCCCEEHHHHHHHHHHH LYLGKKAATPEEVYAAPGPKRLSITLLREIDSNELGKAFTKGIEDNTPKGEMSRLIPGLI HHHCCCCCCHHHHCCCCCCCEEEEEEEECCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHH RMGQIFADQKKLLPGENFTIDWIPGTGTVLTVKGKQQGEPFREIEFFNALMRIWLGPQPA HHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCC DWRLKEALLSKG CHHHHHHHHCCC >Mature Secondary Structure MYKQCITGLAGLVLSLGVLAAPVEISGVKLEDALDLQGTKLQLNGAGIRYKAVFKVYVAG CHHHHHHHHHHHHHHHHHHHCCCEECCEEECCCCCCCCCEEEECCCCEEHHHHHHHHHHH LYLGKKAATPEEVYAAPGPKRLSITLLREIDSNELGKAFTKGIEDNTPKGEMSRLIPGLI HHHCCCCCCHHHHCCCCCCCEEEEEEEECCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHH RMGQIFADQKKLLPGENFTIDWIPGTGTVLTVKGKQQGEPFREIEFFNALMRIWLGPQPA HHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCC DWRLKEALLSKG CHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA