| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91790265
Identifier: 91790265
GI number: 91790265
Start: 4679097
End: 4680401
Strand: Direct
Name: 91790265
Synonym: Bpro_4432
Alternate gene names: NA
Gene position: 4679097-4680401 (Clockwise)
Preceding gene: 91790264
Following gene: 91790291
Centisome position: 89.98
GC content: 53.79
Gene sequence:
>1305_bases ATGACGCGGGTCAGCATCATCCCGGCCTCCTCAAGTATCCCGGCGCTTAGCTCGCTCAAGCCTCGGCAGCGGGGCCCGGG ATCAATTGAGGCACTTTCAAGTCATCTGATAGCGCTTGCCGAACATCACAGTTGCTCACCATATACGCTCATTCACCAGG TTCTTATTCCTCCTTCAGAACAGTTGAGTTTGCGCTGGAGAAGAGTTCGATTCAACGAGTCCCAACTTGTCAATGGCTAT CTTGATGTTGCTCAATACTTGTCAGAAGCGGTAATGAAGTGCAGCCACCGGACAGACATCACGAACTTGACTCTTATTGG GATGCAGTCATTCTGTGATCCAGTTGGAAAACATGTTTTACGACGCGTGAGGCCTTGGTGCCCTGAGTGCTACCGAGAGG CGCGAGCCCACGACATACAGCCCTGGGATCCTCTTTACACCTATGTCACTACAACCGCGGTTTGTGTTTGGCATCAGGTG GCGCTTCGCACAGAGTGTGAAAGGTGCGGGCGTCCCCAGAGATTTGTCCCGAAGCTTCCCTTTCTCGATTTATGCGAGAG ATGCGGGGCCGATCTGGCCATGCAGGGCAGCCCACCACTGAGGACTGGCCGTACACCTAATGACGAATTATGGTTTTCGA GGGCGGCAATGCACTTGATCGAAACGCTTCAGAGCGGCGTGCAACTTTCGGCACATAACTTTGCCAAAAATATCCAACTA CTCATAGACGAACATTTCGGTGGCAATCGACAACAGTTTGCCAAGAAACTTGGAGTCGCGGGATCAGGTCCGAAGAACTG GATCGACCGGGGTTCACACCCCAGTTGGGCGTCGGTTGCTGATCTGGGCTTTCGGATGGAGATCCCTCCCGCTCAACTCG CAACCGCTGATCTGCCGATGACGGACCCAACTTATTGGCGCTATGCAAACCGATTGCTCCTCGACGCGCCTCACATCCGT CCGGCCGCCGAAACGCTTGATGCAGCTCGGGAGGCCTTGAACTCTGCGATCAAAATGGCCCGTGCCAACCCCACCTTACT GCCTGAAAGTATTGAGGCGGTCACCAAGAAAGCTGGCGTGCGTCGGGATCTTCTCAAGCGCCATTTTCCAGACGAATTTG CAACGCTGGCAGGGCTAAGATCCAGCGCCGCAAAATCTCTAGCGCTAAGAAATGCTGCTGAACGTAGCGAAAGATTGGCG TCCGCAATGCAGGACATAGCCACCAGCGGGAAAATGCCCACCTCGCATCGCCTGAAGCTCCAATCAGGGATAAAGATATC GGATTTAATCCCAAGGCGTAATTAA
Upstream 100 bases:
>100_bases TCTTCCCGGTTAACTCGTCAGCGGATGCTTCAGCATCTTCAACGGCAAAACGCGGAACCAACCCTGGTGCACGCAACCCG ATACGCGACGCAGTGCCCCT
Downstream 100 bases:
>100_bases GGGCTCCGGCTTACCGAGATGCCTGAACACTCATATGGGACCGCCGCTTGAATACACCCCCTGAACACCCTCAGTGGGAT CGTCTGGCGTGCTTTGGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 434; Mature: 433
Protein sequence:
>434_residues MTRVSIIPASSSIPALSSLKPRQRGPGSIEALSSHLIALAEHHSCSPYTLIHQVLIPPSEQLSLRWRRVRFNESQLVNGY LDVAQYLSEAVMKCSHRTDITNLTLIGMQSFCDPVGKHVLRRVRPWCPECYREARAHDIQPWDPLYTYVTTTAVCVWHQV ALRTECERCGRPQRFVPKLPFLDLCERCGADLAMQGSPPLRTGRTPNDELWFSRAAMHLIETLQSGVQLSAHNFAKNIQL LIDEHFGGNRQQFAKKLGVAGSGPKNWIDRGSHPSWASVADLGFRMEIPPAQLATADLPMTDPTYWRYANRLLLDAPHIR PAAETLDAAREALNSAIKMARANPTLLPESIEAVTKKAGVRRDLLKRHFPDEFATLAGLRSSAAKSLALRNAAERSERLA SAMQDIATSGKMPTSHRLKLQSGIKISDLIPRRN
Sequences:
>Translated_434_residues MTRVSIIPASSSIPALSSLKPRQRGPGSIEALSSHLIALAEHHSCSPYTLIHQVLIPPSEQLSLRWRRVRFNESQLVNGY LDVAQYLSEAVMKCSHRTDITNLTLIGMQSFCDPVGKHVLRRVRPWCPECYREARAHDIQPWDPLYTYVTTTAVCVWHQV ALRTECERCGRPQRFVPKLPFLDLCERCGADLAMQGSPPLRTGRTPNDELWFSRAAMHLIETLQSGVQLSAHNFAKNIQL LIDEHFGGNRQQFAKKLGVAGSGPKNWIDRGSHPSWASVADLGFRMEIPPAQLATADLPMTDPTYWRYANRLLLDAPHIR PAAETLDAAREALNSAIKMARANPTLLPESIEAVTKKAGVRRDLLKRHFPDEFATLAGLRSSAAKSLALRNAAERSERLA SAMQDIATSGKMPTSHRLKLQSGIKISDLIPRRN >Mature_433_residues TRVSIIPASSSIPALSSLKPRQRGPGSIEALSSHLIALAEHHSCSPYTLIHQVLIPPSEQLSLRWRRVRFNESQLVNGYL DVAQYLSEAVMKCSHRTDITNLTLIGMQSFCDPVGKHVLRRVRPWCPECYREARAHDIQPWDPLYTYVTTTAVCVWHQVA LRTECERCGRPQRFVPKLPFLDLCERCGADLAMQGSPPLRTGRTPNDELWFSRAAMHLIETLQSGVQLSAHNFAKNIQLL IDEHFGGNRQQFAKKLGVAGSGPKNWIDRGSHPSWASVADLGFRMEIPPAQLATADLPMTDPTYWRYANRLLLDAPHIRP AAETLDAAREALNSAIKMARANPTLLPESIEAVTKKAGVRRDLLKRHFPDEFATLAGLRSSAAKSLALRNAAERSERLAS AMQDIATSGKMPTSHRLKLQSGIKISDLIPRRN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48418; Mature: 48287
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRVSIIPASSSIPALSSLKPRQRGPGSIEALSSHLIALAEHHSCSPYTLIHQVLIPPSE CCEEEEEECCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCH QLSLRWRRVRFNESQLVNGYLDVAQYLSEAVMKCSHRTDITNLTLIGMQSFCDPVGKHVL HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEECHHHHHHHHHHHHH RRVRPWCPECYREARAHDIQPWDPLYTYVTTTAVCVWHQVALRTECERCGRPQRFVPKLP HHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC FLDLCERCGADLAMQGSPPLRTGRTPNDELWFSRAAMHLIETLQSGVQLSAHNFAKNIQL HHHHHHHCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHH LIDEHFGGNRQQFAKKLGVAGSGPKNWIDRGSHPSWASVADLGFRMEIPPAQLATADLPM HEECCCCCCHHHHHHHHCCCCCCCHHHHCCCCCCCHHHHHHCCCEECCCHHHHCCCCCCC TDPTYWRYANRLLLDAPHIRPAAETLDAAREALNSAIKMARANPTLLPESIEAVTKKAGV CCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH RRDLLKRHFPDEFATLAGLRSSAAKSLALRNAAERSERLASAMQDIATSGKMPTSHRLKL HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH QSGIKISDLIPRRN HCCCCHHHCCCCCC >Mature Secondary Structure TRVSIIPASSSIPALSSLKPRQRGPGSIEALSSHLIALAEHHSCSPYTLIHQVLIPPSE CEEEEEECCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCH QLSLRWRRVRFNESQLVNGYLDVAQYLSEAVMKCSHRTDITNLTLIGMQSFCDPVGKHVL HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEECHHHHHHHHHHHHH RRVRPWCPECYREARAHDIQPWDPLYTYVTTTAVCVWHQVALRTECERCGRPQRFVPKLP HHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC FLDLCERCGADLAMQGSPPLRTGRTPNDELWFSRAAMHLIETLQSGVQLSAHNFAKNIQL HHHHHHHCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHH LIDEHFGGNRQQFAKKLGVAGSGPKNWIDRGSHPSWASVADLGFRMEIPPAQLATADLPM HEECCCCCCHHHHHHHHCCCCCCCHHHHCCCCCCCHHHHHHCCCEECCCHHHHCCCCCCC TDPTYWRYANRLLLDAPHIRPAAETLDAAREALNSAIKMARANPTLLPESIEAVTKKAGV CCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH RRDLLKRHFPDEFATLAGLRSSAAKSLALRNAAERSERLASAMQDIATSGKMPTSHRLKL HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH QSGIKISDLIPRRN HCCCCHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA