| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91790166
Identifier: 91790166
GI number: 91790166
Start: 4567521
End: 4568660
Strand: Reverse
Name: 91790166
Synonym: Bpro_4331
Alternate gene names: NA
Gene position: 4568660-4567521 (Counterclockwise)
Preceding gene: 91790167
Following gene: 91790162
Centisome position: 87.85
GC content: 56.93
Gene sequence:
>1140_bases ATGACGAAGTTGAAGTTCAAAAATGTTCTAGTTCTTGGTGCTGGCAAGGTCGGCAGCACCGTGGCGGACATGGTCGCGGA GTACCATGGCTTGCCCGTCACCCTTGCGGATTTGAAACCAGGTCGCGGCGATGAGAGCGATGCGCTGGTCCGCAGAGTAT CTCTTAACGTGGAGAGCGCGGAAGATTTGAATGTGGCGCTCTCCGCACATTCGGTTGTCATTAACGCTCTTCCTTTCTAC CTCGCTGCGCGCGTTGCGACCCAAGCTGCGAAATGCGGCGTCCACTATTTCGATCTCACCGAGGACGTGGCCGCGACGAA GGCGATCAGGGACATTTCGAAGACGGCTACCTCTGTGCTCATGCCACAGAGCGGGCTCGCACCAGGCGTAATTGGCATGC TTGGCGGCTATCTGGCGGGTCGATTCGACGAGCTGTACGACCTGCGCCTTCGCGTTGGTGCACTCACCCGCAACGCAACG AACAGCCTTCGGTACAACTTCACGTGGAGCATCGACGGCGTTATTAACGAATACTGCAACCCATGTGATGCTATCGTCAA CGGCCAACTCTTATCGGTTCAGCCAATGGAAGGGCACGAAACCTTTACGCTCGACGCAGAAGCCTTTGAAGCTTTCAACA CATCGGGCGGCCTGGGCACGCTGTGCGAGACCCTGAAGGGGAAGGTTCGCAATCTCGACTACAAGACTATTCGTTATCCC GGCCACCGCGACGCGATGGATTTTCTTCTGCACGATTTGCGCCTGATCGAGCGTCGCGACCTGCTGCGTCAAGTGCTTGA GCATGCAGTTCCACACAGCCGTGAAGACGTTGTGATCCTGTTTGCCTCCGCATCGGGCCTTCGGGACGGTAGGTTCGAAC AGGAGACGCGTGTTGGCCGCGTGTTTGGCGCTCCCTTGCGCGGCAAAGATCGTACGGCTATTGAACTCACGACCGCTGCC GGCGTGGTCGGCGTATTCGAGTTGCTGCAGCAGGGCAAGCTTCCGCTTGCCGGTTTCGTCGGCCAGGAGCAGGCACCTCT TGAAGAGTTTCTCTCTACCGAGGTGGGACACTACTACAAGGGCCTTGGCGTCAAGTCTTCTGCAAATGCATCAAAGAACG AGGTTGTGCATACTTTATAG
Upstream 100 bases:
>100_bases ACGAAGTGAGGCGTTTTTTCAGCGATCTGCTCTCTACCATCTGCCAACACTCACTTCTATAGTTCTTCCAGCGGGCAATT GTGCTCACAGGAGAAATCAA
Downstream 100 bases:
>100_bases ACCGCTGCGAAGCCGGCATCGGGCCAGTTCGTAGGATTTGGTTCATCGTAATGGGGCGTTGTGGTGAATAGGCGAGAAGC TCTCGCCTAGGCCGCCTTCA
Product: saccharopine dehydrogenase
Products: NA
Alternate protein names: Dehydrogenase; L-Lysine Dehydrogenase; Saccharopine Reductase; Saccharopine Dehydrogenase Family Protein; Dehydrogenase Protein; Saccharopine Dehydrogenase Protein; Saccharopine Dehydrogenase And Related Protein; TrkA-NSaccharopine Dehydrogenase; Oxidoreductase; Saccharopine Dehydrogenase Conjectural; Saccharopine Dehydrogenase-Like Protein; Saccharopine Dehydrogenase/Saccharopine Reductase
Number of amino acids: Translated: 379; Mature: 378
Protein sequence:
>379_residues MTKLKFKNVLVLGAGKVGSTVADMVAEYHGLPVTLADLKPGRGDESDALVRRVSLNVESAEDLNVALSAHSVVINALPFY LAARVATQAAKCGVHYFDLTEDVAATKAIRDISKTATSVLMPQSGLAPGVIGMLGGYLAGRFDELYDLRLRVGALTRNAT NSLRYNFTWSIDGVINEYCNPCDAIVNGQLLSVQPMEGHETFTLDAEAFEAFNTSGGLGTLCETLKGKVRNLDYKTIRYP GHRDAMDFLLHDLRLIERRDLLRQVLEHAVPHSREDVVILFASASGLRDGRFEQETRVGRVFGAPLRGKDRTAIELTTAA GVVGVFELLQQGKLPLAGFVGQEQAPLEEFLSTEVGHYYKGLGVKSSANASKNEVVHTL
Sequences:
>Translated_379_residues MTKLKFKNVLVLGAGKVGSTVADMVAEYHGLPVTLADLKPGRGDESDALVRRVSLNVESAEDLNVALSAHSVVINALPFY LAARVATQAAKCGVHYFDLTEDVAATKAIRDISKTATSVLMPQSGLAPGVIGMLGGYLAGRFDELYDLRLRVGALTRNAT NSLRYNFTWSIDGVINEYCNPCDAIVNGQLLSVQPMEGHETFTLDAEAFEAFNTSGGLGTLCETLKGKVRNLDYKTIRYP GHRDAMDFLLHDLRLIERRDLLRQVLEHAVPHSREDVVILFASASGLRDGRFEQETRVGRVFGAPLRGKDRTAIELTTAA GVVGVFELLQQGKLPLAGFVGQEQAPLEEFLSTEVGHYYKGLGVKSSANASKNEVVHTL >Mature_378_residues TKLKFKNVLVLGAGKVGSTVADMVAEYHGLPVTLADLKPGRGDESDALVRRVSLNVESAEDLNVALSAHSVVINALPFYL AARVATQAAKCGVHYFDLTEDVAATKAIRDISKTATSVLMPQSGLAPGVIGMLGGYLAGRFDELYDLRLRVGALTRNATN SLRYNFTWSIDGVINEYCNPCDAIVNGQLLSVQPMEGHETFTLDAEAFEAFNTSGGLGTLCETLKGKVRNLDYKTIRYPG HRDAMDFLLHDLRLIERRDLLRQVLEHAVPHSREDVVILFASASGLRDGRFEQETRVGRVFGAPLRGKDRTAIELTTAAG VVGVFELLQQGKLPLAGFVGQEQAPLEEFLSTEVGHYYKGLGVKSSANASKNEVVHTL
Specific function: Unknown
COG id: COG1748
COG function: function code E; Saccharopine dehydrogenase and related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41148; Mature: 41016
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKLKFKNVLVLGAGKVGSTVADMVAEYHGLPVTLADLKPGRGDESDALVRRVSLNVESA CCCEEECCEEEEECCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCC EDLNVALSAHSVVINALPFYLAARVATQAAKCGVHYFDLTEDVAATKAIRDISKTATSVL CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHH MPQSGLAPGVIGMLGGYLAGRFDELYDLRLRVGALTRNATNSLRYNFTWSIDGVINEYCN CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECHHHHHHCC PCDAIVNGQLLSVQPMEGHETFTLDAEAFEAFNTSGGLGTLCETLKGKVRNLDYKTIRYP HHHHHHCCEEEEEECCCCCCEEEECHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEECC GHRDAMDFLLHDLRLIERRDLLRQVLEHAVPHSREDVVILFASASGLRDGRFEQETRVGR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHHH VFGAPLRGKDRTAIELTTAAGVVGVFELLQQGKLPLAGFVGQEQAPLEEFLSTEVGHYYK HCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHH GLGVKSSANASKNEVVHTL CCCCCCCCCCCCCCCEECC >Mature Secondary Structure TKLKFKNVLVLGAGKVGSTVADMVAEYHGLPVTLADLKPGRGDESDALVRRVSLNVESA CCEEECCEEEEECCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCC EDLNVALSAHSVVINALPFYLAARVATQAAKCGVHYFDLTEDVAATKAIRDISKTATSVL CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHH MPQSGLAPGVIGMLGGYLAGRFDELYDLRLRVGALTRNATNSLRYNFTWSIDGVINEYCN CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECHHHHHHCC PCDAIVNGQLLSVQPMEGHETFTLDAEAFEAFNTSGGLGTLCETLKGKVRNLDYKTIRYP HHHHHHCCEEEEEECCCCCCEEEECHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEECC GHRDAMDFLLHDLRLIERRDLLRQVLEHAVPHSREDVVILFASASGLRDGRFEQETRVGR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHHH VFGAPLRGKDRTAIELTTAAGVVGVFELLQQGKLPLAGFVGQEQAPLEEFLSTEVGHYYK HCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHH GLGVKSSANASKNEVVHTL CCCCCCCCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA