Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is 91790127

Identifier: 91790127

GI number: 91790127

Start: 4525940

End: 4526230

Strand: Reverse

Name: 91790127

Synonym: Bpro_4289

Alternate gene names: NA

Gene position: 4526230-4525940 (Counterclockwise)

Preceding gene: 91790129

Following gene: 91790123

Centisome position: 87.04

GC content: 62.2

Gene sequence:

>291_bases
ATGAAATCGAAATTGATCGCCAGCGCTGTGCTTGCTGTCGCCGCCCTGACTTCCGTAGCCGCATCGGCTGAAACCTTCAA
TTCCTATCTGTGGGATCAGATGAAAGCGCCGTCGACCCGCACGCGTGCCGAAGTCCAGGCCGAAGTGCTGCAGGGGCAGC
GTGGAGGGGCCACGGCCAGTTCCAGCTCCAACGGTGCAACGACCCAGCAAAACCCGGGCGCGTCCAGTGGCGACACGTCT
GGCACTGCGCCCCAAGGTGCTGTCGGCGTCGTGAAGTCCGTCCAGCAATAA

Upstream 100 bases:

>100_bases
CCGGAGCCCCCCTGTAAGGCGACTCACCGAGGCTGGACAGACGGGATGGATGAGCCCGCCATGCCCGGAAACGTCAAAAA
AACTCTGAGAGGACTTCATC

Downstream 100 bases:

>100_bases
GCGACGCCAGTGAGACACGGCAGGTGCCCGCTCCAGGCTGGCACCCCCGGTGTACGGTGTACTCACGCAAAGGCTCCGGC
GCCGTAACAGGTTCCGGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 96; Mature: 96

Protein sequence:

>96_residues
MKSKLIASAVLAVAALTSVAASAETFNSYLWDQMKAPSTRTRAEVQAEVLQGQRGGATASSSSNGATTQQNPGASSGDTS
GTAPQGAVGVVKSVQQ

Sequences:

>Translated_96_residues
MKSKLIASAVLAVAALTSVAASAETFNSYLWDQMKAPSTRTRAEVQAEVLQGQRGGATASSSSNGATTQQNPGASSGDTS
GTAPQGAVGVVKSVQQ
>Mature_96_residues
MKSKLIASAVLAVAALTSVAASAETFNSYLWDQMKAPSTRTRAEVQAEVLQGQRGGATASSSSNGATTQQNPGASSGDTS
GTAPQGAVGVVKSVQQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9585; Mature: 9585

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSKLIASAVLAVAALTSVAASAETFNSYLWDQMKAPSTRTRAEVQAEVLQGQRGGATAS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCC
SSSNGATTQQNPGASSGDTSGTAPQGAVGVVKSVQQ
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCC
>Mature Secondary Structure
MKSKLIASAVLAVAALTSVAASAETFNSYLWDQMKAPSTRTRAEVQAEVLQGQRGGATAS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCC
SSSNGATTQQNPGASSGDTSGTAPQGAVGVVKSVQQ
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA