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The map label for this gene is lrrA [H]

Identifier: 91790123

GI number: 91790123

Start: 4519407

End: 4520345

Strand: Reverse

Name: lrrA [H]

Synonym: Bpro_4285

Alternate gene names: 91790123

Gene position: 4520345-4519407 (Counterclockwise)

Preceding gene: 91790127

Following gene: 91790120

Centisome position: 86.93

GC content: 64.75

Gene sequence:

>939_bases
ATGCAAGTGAAGCGCGCCGTGCTGGGGCAGTTGAGCGACATGGACCTGCGGCTGCTGCAGGTGTTCAAGAGCGTGGTGGA
TTGCGGTGGCATGGCCGCGGCTGAGCTGGAGCTCAACATCGGCACGTCCACGGTGAGCCGCCATGTGAAGGACCTGGAGA
CCCGGCTGGGCCTGGTGCTGTGCCGCCGTGGCCGGGCCGGTTTTGCCCTCACGCCCGAGGGGCAACGGGTCTACGAAGAG
ACTTTGCGCTTGCTGGCTTCGGTGGAGGGTTTCCGCAACAGCATCGACGATATCCACTCACGCATGGGGGGAGCGCTGGC
GGTCGCAGTGTTCGACAAGACCGCCAGCAATCCGCGGGCCCACATTGGTGAGGCGATTGCCGAATTCACCGAACAGGCGC
CCGACGTGCACCTGCAACTGCATGTGGCTTCAATCAACGCCATCGAGCGTGGCGTGATGGATGGCAGCTACCAGGTGGGC
ATCATTCCGGCCCACCGCACTTCTCACAGTCTGCTGTATGCCGAGCTGTTCAGCGAGACCATGCTGCTGTACTGCGGCGC
GCAGCATCCGCTGTTTGGCGCCGACCCGGGGTCTTCGCTGACCTGGGACGGGCTGCAGGCCTATCATTTCGCGGGGCTGG
GCTATCACTCGCCCAACATGGCCTTAAGCCACAGCGCCGGCCTGTCGCGCAAGGCCACGGGGTTTGACCAGGAGGCCATT
GCCACCCTGATTCTCTCGGGGAAATTTCTCGGCTTCCTGCCAGACCATTACGCCGAGGGGTTTGAGCGACGCGGCCAGAT
GCGGGCGGTGCAGCCCGCCGTGTTCCGCTACCCCTGCACTTTTGTGAGCCTGCTCAGGCGTTCCCCCCAGCCGTCGCGCG
TGGTACAGGCCTTTCACGATTGCCTGGTGCGGGCGCACGGCAAGATCGGGGCGCCCTGA

Upstream 100 bases:

>100_bases
GCCCGAGAGCCCGCGAGCCCTTTGGCGAGGCGATGAGGACATTCTGGAGTGTTCTGTTAACCTCTAAAAGCATGCAATAT
CAATGTTTACTTGAGGTTTT

Downstream 100 bases:

>100_bases
AGCTGCAGCGAAGGAGGACTACCAATCCACCACGCTCAGGCCCAGGCTCAACACAGTGCGCTTTCTGTTGAAGTCCAGCA
GGCTGTCGCCATAGCCGCTG

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MQVKRAVLGQLSDMDLRLLQVFKSVVDCGGMAAAELELNIGTSTVSRHVKDLETRLGLVLCRRGRAGFALTPEGQRVYEE
TLRLLASVEGFRNSIDDIHSRMGGALAVAVFDKTASNPRAHIGEAIAEFTEQAPDVHLQLHVASINAIERGVMDGSYQVG
IIPAHRTSHSLLYAELFSETMLLYCGAQHPLFGADPGSSLTWDGLQAYHFAGLGYHSPNMALSHSAGLSRKATGFDQEAI
ATLILSGKFLGFLPDHYAEGFERRGQMRAVQPAVFRYPCTFVSLLRRSPQPSRVVQAFHDCLVRAHGKIGAP

Sequences:

>Translated_312_residues
MQVKRAVLGQLSDMDLRLLQVFKSVVDCGGMAAAELELNIGTSTVSRHVKDLETRLGLVLCRRGRAGFALTPEGQRVYEE
TLRLLASVEGFRNSIDDIHSRMGGALAVAVFDKTASNPRAHIGEAIAEFTEQAPDVHLQLHVASINAIERGVMDGSYQVG
IIPAHRTSHSLLYAELFSETMLLYCGAQHPLFGADPGSSLTWDGLQAYHFAGLGYHSPNMALSHSAGLSRKATGFDQEAI
ATLILSGKFLGFLPDHYAEGFERRGQMRAVQPAVFRYPCTFVSLLRRSPQPSRVVQAFHDCLVRAHGKIGAP
>Mature_312_residues
MQVKRAVLGQLSDMDLRLLQVFKSVVDCGGMAAAELELNIGTSTVSRHVKDLETRLGLVLCRRGRAGFALTPEGQRVYEE
TLRLLASVEGFRNSIDDIHSRMGGALAVAVFDKTASNPRAHIGEAIAEFTEQAPDVHLQLHVASINAIERGVMDGSYQVG
IIPAHRTSHSLLYAELFSETMLLYCGAQHPLFGADPGSSLTWDGLQAYHFAGLGYHSPNMALSHSAGLSRKATGFDQEAI
ATLILSGKFLGFLPDHYAEGFERRGQMRAVQPAVFRYPCTFVSLLRRSPQPSRVVQAFHDCLVRAHGKIGAP

Specific function: Unknown

COG id: COG0583

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 33997; Mature: 33997

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVKRAVLGQLSDMDLRLLQVFKSVVDCGGMAAAELELNIGTSTVSRHVKDLETRLGLVL
CCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHH
CRRGRAGFALTPEGQRVYEETLRLLASVEGFRNSIDDIHSRMGGALAVAVFDKTASNPRA
HCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHH
HIGEAIAEFTEQAPDVHLQLHVASINAIERGVMDGSYQVGIIPAHRTSHSLLYAELFSET
HHHHHHHHHHHCCCCEEEEEEEEHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHH
MLLYCGAQHPLFGADPGSSLTWDGLQAYHFAGLGYHSPNMALSHSAGLSRKATGFDQEAI
HHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCHHHH
ATLILSGKFLGFLPDHYAEGFERRGQMRAVQPAVFRYPCTFVSLLRRSPQPSRVVQAFHD
HHHHHHCCHHHCCCHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
CLVRAHGKIGAP
HHHHHCCCCCCC
>Mature Secondary Structure
MQVKRAVLGQLSDMDLRLLQVFKSVVDCGGMAAAELELNIGTSTVSRHVKDLETRLGLVL
CCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHH
CRRGRAGFALTPEGQRVYEETLRLLASVEGFRNSIDDIHSRMGGALAVAVFDKTASNPRA
HCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHH
HIGEAIAEFTEQAPDVHLQLHVASINAIERGVMDGSYQVGIIPAHRTSHSLLYAELFSET
HHHHHHHHHHHCCCCEEEEEEEEHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHH
MLLYCGAQHPLFGADPGSSLTWDGLQAYHFAGLGYHSPNMALSHSAGLSRKATGFDQEAI
HHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCHHHH
ATLILSGKFLGFLPDHYAEGFERRGQMRAVQPAVFRYPCTFVSLLRRSPQPSRVVQAFHD
HHHHHHCCHHHCCCHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
CLVRAHGKIGAP
HHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8661945 [H]