| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is smtA [C]
Identifier: 91790098
GI number: 91790098
Start: 4490189
End: 4491514
Strand: Direct
Name: smtA [C]
Synonym: Bpro_4260
Alternate gene names: 91790098
Gene position: 4490189-4491514 (Clockwise)
Preceding gene: 91790097
Following gene: 91790100
Centisome position: 86.35
GC content: 65.69
Gene sequence:
>1326_bases ATGCCCGACAACTACCTGCCGCAGGTCAGAAGCCAGTACGAAGCCCTGCCCTACCCGCCGTGCAATCCGGAGGACGACCG CCAGCGGCTGGTGCTGACCTGGCTGGAAGACCTGCCGATGATCAATCACTACTGCTTTGCCGGAAAGCAGTCGTTTCGCA ACGGTTTCAGGGCCCTGGTGGCGGGTGGCGGCACCGGGGACGCCACGATCTTCCTGGCCGAGCAGCTGCGCGCCACCGAC GCACAGATCGTGCACCTGGACATGAGCGAGGCCAGCATCGCGCTGGCAAAGGAAAGGGCGCGCATTCGCGGCCTGAGCAA CATCACCTGGGTGCACGACTCGCTGCTCAACCTGCCCCATCTGGGCCTGGCGCCCTTCGACTACATCAACTGCAGCGGCG TGCTGCACCACCTGGCCGACCCCGACCTGGGCTTCCGGGCCCTGCGCGCGGTGCTCAAACCCGAGGGGGCCATCGGCCTG ATGGTGTACGCCACGGCGGGGCGCACCGGGGTCTACCAGATGCAGGCCCTGATGCGGCTCGTCAACGGCACGCAGGCTGA CGACCAGCGCAAGATTGCCAATACCCGCGACCTGCTGGCCAGCCTGCCGCCCAGCAACTGGTTCAAGCGCAGCGAAGACC TGCACCACGACCACAAGGCCGGGGACGCCGGCATCTACGACCTGCTGCTGCATTCGCAGGACCGCTCGTACTCGGTGGGC GAACTGTTTGACTGGCTGGGGCACGACGCCGCAGGCACGGGAGGGCACGGCCTGCACCTCGAATTTACCGACGTGCAGCG CGGCCGTTCGCCCTACCTGCCGCACATGGTGCTGGGCAGCCAGCCACCGGCCATGGCCGGCGAACTGCGCAAGATGCCGC GCCGACGGCAGTATGAGATGGCCGAGCTGATGATAGGCAACCTCATCACCCATTCGCTGTACGTCACGCGCGATGCCGGC TGTACCGCGCCTTACGGCAATGCCGAATACGTGCCTTTTTTCTTCCATGAGCCGCTGACCGGCGACATCGCGGCACAGGT CTTCAGCAGCAACCGCGGCCAGCCCTTCCTGCTCCGGCACCAGCACTCCGGCGTGTCGGTGATGGTCAACCCCGGCCGAT ATGGGCCGCAAATCCTTCGCCTGATTGACGGCCAGAGAACATTCGGCGAGATTTTTGATCAGTTTCGCGCCGACTGGCGC GGCCAGGCGGCCGCGCCGGACAACGCGGCGCTGTTTGCCGACTTTTCCGAATCATTTGACGTGCTGAACGCGCTGGACCG CCTGCTGCTGAAGCATCCGCAAGCCGACGCGGCTAAGGCGCCTTAG
Upstream 100 bases:
>100_bases GGTTCCACGCCGTCACTTGGTCTGGGCGGCTGCGCTGGCGTCATGGCTCTTCGGCCGGAGACAATACCTCTGTTCGCCAT TCCTTTTTCCGGAAAATGCC
Downstream 100 bases:
>100_bases GGCTCGTTCGGGAATAGGTTGTGCATTTGACCGTCGGATTCGGGATGCGCTGCTAGGCGCGGTGAGCGCCGTGTGGCCAG GCCACACAAGCGAGTCGCAA
Product: type 12 methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 441; Mature: 440
Protein sequence:
>441_residues MPDNYLPQVRSQYEALPYPPCNPEDDRQRLVLTWLEDLPMINHYCFAGKQSFRNGFRALVAGGGTGDATIFLAEQLRATD AQIVHLDMSEASIALAKERARIRGLSNITWVHDSLLNLPHLGLAPFDYINCSGVLHHLADPDLGFRALRAVLKPEGAIGL MVYATAGRTGVYQMQALMRLVNGTQADDQRKIANTRDLLASLPPSNWFKRSEDLHHDHKAGDAGIYDLLLHSQDRSYSVG ELFDWLGHDAAGTGGHGLHLEFTDVQRGRSPYLPHMVLGSQPPAMAGELRKMPRRRQYEMAELMIGNLITHSLYVTRDAG CTAPYGNAEYVPFFFHEPLTGDIAAQVFSSNRGQPFLLRHQHSGVSVMVNPGRYGPQILRLIDGQRTFGEIFDQFRADWR GQAAAPDNAALFADFSESFDVLNALDRLLLKHPQADAAKAP
Sequences:
>Translated_441_residues MPDNYLPQVRSQYEALPYPPCNPEDDRQRLVLTWLEDLPMINHYCFAGKQSFRNGFRALVAGGGTGDATIFLAEQLRATD AQIVHLDMSEASIALAKERARIRGLSNITWVHDSLLNLPHLGLAPFDYINCSGVLHHLADPDLGFRALRAVLKPEGAIGL MVYATAGRTGVYQMQALMRLVNGTQADDQRKIANTRDLLASLPPSNWFKRSEDLHHDHKAGDAGIYDLLLHSQDRSYSVG ELFDWLGHDAAGTGGHGLHLEFTDVQRGRSPYLPHMVLGSQPPAMAGELRKMPRRRQYEMAELMIGNLITHSLYVTRDAG CTAPYGNAEYVPFFFHEPLTGDIAAQVFSSNRGQPFLLRHQHSGVSVMVNPGRYGPQILRLIDGQRTFGEIFDQFRADWR GQAAAPDNAALFADFSESFDVLNALDRLLLKHPQADAAKAP >Mature_440_residues PDNYLPQVRSQYEALPYPPCNPEDDRQRLVLTWLEDLPMINHYCFAGKQSFRNGFRALVAGGGTGDATIFLAEQLRATDA QIVHLDMSEASIALAKERARIRGLSNITWVHDSLLNLPHLGLAPFDYINCSGVLHHLADPDLGFRALRAVLKPEGAIGLM VYATAGRTGVYQMQALMRLVNGTQADDQRKIANTRDLLASLPPSNWFKRSEDLHHDHKAGDAGIYDLLLHSQDRSYSVGE LFDWLGHDAAGTGGHGLHLEFTDVQRGRSPYLPHMVLGSQPPAMAGELRKMPRRRQYEMAELMIGNLITHSLYVTRDAGC TAPYGNAEYVPFFFHEPLTGDIAAQVFSSNRGQPFLLRHQHSGVSVMVNPGRYGPQILRLIDGQRTFGEIFDQFRADWRG QAAAPDNAALFADFSESFDVLNALDRLLLKHPQADAAKAP
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv2067c [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: NA
Molecular weight: Translated: 49005; Mature: 48874
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDNYLPQVRSQYEALPYPPCNPEDDRQRLVLTWLEDLPMINHYCFAGKQSFRNGFRALV CCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHEEEE AGGGTGDATIFLAEQLRATDAQIVHLDMSEASIALAKERARIRGLSNITWVHDSLLNLPH ECCCCCCEEEEEEHHHCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCC LGLAPFDYINCSGVLHHLADPDLGFRALRAVLKPEGAIGLMVYATAGRTGVYQMQALMRL CCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHH VNGTQADDQRKIANTRDLLASLPPSNWFKRSEDLHHDHKAGDAGIYDLLLHSQDRSYSVG HCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCHHHCCCCCCCCCCHHHHHEECCCCCCCHH ELFDWLGHDAAGTGGHGLHLEFTDVQRGRSPYLPHMVLGSQPPAMAGELRKMPRRRQYEM HHHHHHCCCCCCCCCCEEEEEEHHHHCCCCCCCCCCEECCCCCHHHHHHHHCCHHHHHHH AELMIGNLITHSLYVTRDAGCTAPYGNAEYVPFFFHEPLTGDIAAQVFSSNRGQPFLLRH HHHHHHHHHHHHEEEEECCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCEEEEEE QHSGVSVMVNPGRYGPQILRLIDGQRTFGEIFDQFRADWRGQAAAPDNAALFADFSESFD CCCCEEEEECCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECHHHHHH VLNALDRLLLKHPQADAAKAP HHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure PDNYLPQVRSQYEALPYPPCNPEDDRQRLVLTWLEDLPMINHYCFAGKQSFRNGFRALV CCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHEEEE AGGGTGDATIFLAEQLRATDAQIVHLDMSEASIALAKERARIRGLSNITWVHDSLLNLPH ECCCCCCEEEEEEHHHCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCC LGLAPFDYINCSGVLHHLADPDLGFRALRAVLKPEGAIGLMVYATAGRTGVYQMQALMRL CCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHH VNGTQADDQRKIANTRDLLASLPPSNWFKRSEDLHHDHKAGDAGIYDLLLHSQDRSYSVG HCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCHHHCCCCCCCCCCHHHHHEECCCCCCCHH ELFDWLGHDAAGTGGHGLHLEFTDVQRGRSPYLPHMVLGSQPPAMAGELRKMPRRRQYEM HHHHHHCCCCCCCCCCEEEEEEHHHHCCCCCCCCCCEECCCCCHHHHHHHHCCHHHHHHH AELMIGNLITHSLYVTRDAGCTAPYGNAEYVPFFFHEPLTGDIAAQVFSSNRGQPFLLRH HHHHHHHHHHHHEEEEECCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCEEEEEE QHSGVSVMVNPGRYGPQILRLIDGQRTFGEIFDQFRADWRGQAAAPDNAALFADFSESFD CCCCEEEEECCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECHHHHHH VLNALDRLLLKHPQADAAKAP HHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3041005; 1901865 [H]