| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is yajO [H]
Identifier: 91790087
GI number: 91790087
Start: 4475046
End: 4476077
Strand: Reverse
Name: yajO [H]
Synonym: Bpro_4249
Alternate gene names: 91790087
Gene position: 4476077-4475046 (Counterclockwise)
Preceding gene: 91790088
Following gene: 91790086
Centisome position: 86.07
GC content: 66.96
Gene sequence:
>1032_bases ATGGAACACCGCTATCTCGGCAACTCCGGCTTCAAGGTGCCAGCCCTCGGCTTCGGCACCGGCACCTTTGGCGGCCAGGG CCCGCTCTTCAGCGCCTGGGGCAACACCGACGTGGCCGGCGCGCGCCGGATCATCGACATCTGCCTGGACGCAGGCGTCA ACCTGTTCGACACGGCTGACGTGTATTCGAACGGGGCTTCCGAATCCATCCTCGGCGCCGCGCTGAAGGGCCGGCGCGAC AAGGCCATCGTCTCGACCAAGCTCTCGCTGCGCATCGGCGAGGGGCCGAACGACGTCGGCTCCTCGCGCCATCACCTGAT AGCGGCCACGAACGCGGCGCTGCAGCGGCTGGACACGGACTACATCGACATCTTGCAGCTGCATGCCTTCGATGCGATGA CGCCGGTGGAGCAGGTGCTCGGCACGCTCGACGACCTGGTGCGCGCAGGCAAGGTACGTTACATCGGCCTCTCGAACTTC TCCGGCTGGCAACTGATGAAATCGCTGGCTGCCGCAGACCGTTTGGGGCTGCAGCGTTACGTTGCGAACCAGACCTACTA CTCGCTGATCGGCCGCGACTACGAGTGGGAGCTGATGCCGCTCGGCATCGACCAGGGCGTGGGCGCGATTGTCTGGAGTC CGCTCGGCTGGGGCCGCCTGACCGGAAAAATCCGGCGCGGCCAGCCACTGCCTGCGGGCAGTCGCTTGCACGATACGGCC GGCTTCGCGCCGCCGGTCGATGACGAGCGCCTGTACCGCGTGGTCGATGCGATGGACGAGGTCGCGCTGGAGACCGGCAA GACGCTGCCGCAGATTGCGCTCAACTGGCTGCTGCAGCGGCCCACCGTCGCAAGTGTGCTGATCGGTGCGCGCGACGAGG AGCAACTGATGCAGAACCTTGGCGCGCTCGGCTGGCAACTCACGACCGAGCAGGTCGCGCGGCTCGACGCGGCCAGCGCC GTGACGCCGCCCTATCCCTACTACCCGTACTGGAACGGGCAGTTTGCTGAGCGCAGCCCGGTGGCGGTATAG
Upstream 100 bases:
>100_bases CACTCGATATGCGCGCTGCCCCGCCTGAAGGTGCCGCCGTGCGCGCCTGAGCGATCTTTTCCCTTTCCTATTCAGTTTCA CGCTACACAAGGACTTCAAC
Downstream 100 bases:
>100_bases CGAAGAAGTCCGGCCGCCATGCCCGCCGTCTGCTGATAGAGGTGGTGCAATACCTCAAAAAGGCAAGCCCCCAAACCGGC GGTAACCAGCTTGAGGGCTT
Product: aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 343; Mature: 343
Protein sequence:
>343_residues MEHRYLGNSGFKVPALGFGTGTFGGQGPLFSAWGNTDVAGARRIIDICLDAGVNLFDTADVYSNGASESILGAALKGRRD KAIVSTKLSLRIGEGPNDVGSSRHHLIAATNAALQRLDTDYIDILQLHAFDAMTPVEQVLGTLDDLVRAGKVRYIGLSNF SGWQLMKSLAAADRLGLQRYVANQTYYSLIGRDYEWELMPLGIDQGVGAIVWSPLGWGRLTGKIRRGQPLPAGSRLHDTA GFAPPVDDERLYRVVDAMDEVALETGKTLPQIALNWLLQRPTVASVLIGARDEEQLMQNLGALGWQLTTEQVARLDAASA VTPPYPYYPYWNGQFAERSPVAV
Sequences:
>Translated_343_residues MEHRYLGNSGFKVPALGFGTGTFGGQGPLFSAWGNTDVAGARRIIDICLDAGVNLFDTADVYSNGASESILGAALKGRRD KAIVSTKLSLRIGEGPNDVGSSRHHLIAATNAALQRLDTDYIDILQLHAFDAMTPVEQVLGTLDDLVRAGKVRYIGLSNF SGWQLMKSLAAADRLGLQRYVANQTYYSLIGRDYEWELMPLGIDQGVGAIVWSPLGWGRLTGKIRRGQPLPAGSRLHDTA GFAPPVDDERLYRVVDAMDEVALETGKTLPQIALNWLLQRPTVASVLIGARDEEQLMQNLGALGWQLTTEQVARLDAASA VTPPYPYYPYWNGQFAERSPVAV >Mature_343_residues MEHRYLGNSGFKVPALGFGTGTFGGQGPLFSAWGNTDVAGARRIIDICLDAGVNLFDTADVYSNGASESILGAALKGRRD KAIVSTKLSLRIGEGPNDVGSSRHHLIAATNAALQRLDTDYIDILQLHAFDAMTPVEQVLGTLDDLVRAGKVRYIGLSNF SGWQLMKSLAAADRLGLQRYVANQTYYSLIGRDYEWELMPLGIDQGVGAIVWSPLGWGRLTGKIRRGQPLPAGSRLHDTA GFAPPVDDERLYRVVDAMDEVALETGKTLPQIALNWLLQRPTVASVLIGARDEEQLMQNLGALGWQLTTEQVARLDAASA VTPPYPYYPYWNGQFAERSPVAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436966, Length=326, Percent_Identity=34.0490797546012, Blast_Score=169, Evalue=4e-42, Organism=Homo sapiens, GI27436964, Length=326, Percent_Identity=33.7423312883436, Blast_Score=168, Evalue=7e-42, Organism=Homo sapiens, GI27436962, Length=326, Percent_Identity=33.7423312883436, Blast_Score=167, Evalue=1e-41, Organism=Homo sapiens, GI27436969, Length=311, Percent_Identity=34.0836012861736, Blast_Score=162, Evalue=6e-40, Organism=Homo sapiens, GI4504825, Length=309, Percent_Identity=33.9805825242718, Blast_Score=161, Evalue=1e-39, Organism=Homo sapiens, GI27436971, Length=327, Percent_Identity=31.8042813455657, Blast_Score=141, Evalue=7e-34, Organism=Homo sapiens, GI223718702, Length=274, Percent_Identity=28.8321167883212, Blast_Score=82, Evalue=9e-16, Organism=Homo sapiens, GI41327764, Length=274, Percent_Identity=28.4671532846715, Blast_Score=75, Evalue=7e-14, Organism=Homo sapiens, GI41152114, Length=271, Percent_Identity=27.3062730627306, Blast_Score=72, Evalue=8e-13, Organism=Escherichia coli, GI87081735, Length=336, Percent_Identity=36.9047619047619, Blast_Score=201, Evalue=5e-53, Organism=Escherichia coli, GI1789375, Length=329, Percent_Identity=31.9148936170213, Blast_Score=149, Evalue=2e-37, Organism=Escherichia coli, GI1789199, Length=362, Percent_Identity=33.1491712707182, Blast_Score=144, Evalue=7e-36, Organism=Escherichia coli, GI1788070, Length=330, Percent_Identity=33.3333333333333, Blast_Score=124, Evalue=8e-30, Organism=Escherichia coli, GI1788081, Length=325, Percent_Identity=26.4615384615385, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI48994888, Length=320, Percent_Identity=27.1875, Blast_Score=71, Evalue=1e-13, Organism=Caenorhabditis elegans, GI212645785, Length=324, Percent_Identity=24.0740740740741, Blast_Score=69, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6325169, Length=350, Percent_Identity=28.2857142857143, Blast_Score=152, Evalue=9e-38, Organism=Saccharomyces cerevisiae, GI6319958, Length=294, Percent_Identity=29.5918367346939, Blast_Score=135, Evalue=7e-33, Organism=Saccharomyces cerevisiae, GI6323998, Length=329, Percent_Identity=27.9635258358663, Blast_Score=129, Evalue=9e-31, Organism=Saccharomyces cerevisiae, GI6322615, Length=256, Percent_Identity=27.734375, Blast_Score=108, Evalue=2e-24, Organism=Saccharomyces cerevisiae, GI6319951, Length=334, Percent_Identity=25.1497005988024, Blast_Score=106, Evalue=4e-24, Organism=Saccharomyces cerevisiae, GI6321052, Length=157, Percent_Identity=29.2993630573248, Blast_Score=68, Evalue=2e-12, Organism=Drosophila melanogaster, GI24640980, Length=324, Percent_Identity=26.5432098765432, Blast_Score=103, Evalue=2e-22, Organism=Drosophila melanogaster, GI45549126, Length=324, Percent_Identity=26.5432098765432, Blast_Score=102, Evalue=3e-22, Organism=Drosophila melanogaster, GI24646155, Length=346, Percent_Identity=26.5895953757225, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI24646159, Length=317, Percent_Identity=26.4984227129338, Blast_Score=72, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 37288; Mature: 37288
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: PS00062 ALDOKETO_REDUCTASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEHRYLGNSGFKVPALGFGTGTFGGQGPLFSAWGNTDVAGARRIIDICLDAGVNLFDTAD CCCCEECCCCCCCCEEECCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCEEECHH VYSNGASESILGAALKGRRDKAIVSTKLSLRIGEGPNDVGSSRHHLIAATNAALQRLDTD HHCCCCCHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCCCCCCCEEEEEHHHHHHHHCCH YIDILQLHAFDAMTPVEQVLGTLDDLVRAGKVRYIGLSNFSGWQLMKSLAAADRLGLQRY HHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHH VANQTYYSLIGRDYEWELMPLGIDQGVGAIVWSPLGWGRLTGKIRRGQPLPAGSRLHDTA HHHHHHHHHHCCCCCEEEEEECCCCCCCEEEECCCCCCHHCCCCCCCCCCCCCCCCCCCC GFAPPVDDERLYRVVDAMDEVALETGKTLPQIALNWLLQRPTVASVLIGARDEEQLMQNL CCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHH GALGWQLTTEQVARLDAASAVTPPYPYYPYWNGQFAERSPVAV HHCCEEECHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MEHRYLGNSGFKVPALGFGTGTFGGQGPLFSAWGNTDVAGARRIIDICLDAGVNLFDTAD CCCCEECCCCCCCCEEECCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCEEECHH VYSNGASESILGAALKGRRDKAIVSTKLSLRIGEGPNDVGSSRHHLIAATNAALQRLDTD HHCCCCCHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCCCCCCCEEEEEHHHHHHHHCCH YIDILQLHAFDAMTPVEQVLGTLDDLVRAGKVRYIGLSNFSGWQLMKSLAAADRLGLQRY HHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHH VANQTYYSLIGRDYEWELMPLGIDQGVGAIVWSPLGWGRLTGKIRRGQPLPAGSRLHDTA HHHHHHHHHHCCCCCEEEEEECCCCCCCEEEECCCCCCHHCCCCCCCCCCCCCCCCCCCC GFAPPVDDERLYRVVDAMDEVALETGKTLPQIALNWLLQRPTVASVLIGARDEEQLMQNL CCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHH GALGWQLTTEQVARLDAASAVTPPYPYYPYWNGQFAERSPVAV HHCCEEECHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]