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The map label for this gene is ymdC [H]

Identifier: 91790068

GI number: 91790068

Start: 4459092

End: 4460819

Strand: Direct

Name: ymdC [H]

Synonym: Bpro_4230

Alternate gene names: 91790068

Gene position: 4459092-4460819 (Clockwise)

Preceding gene: 91790067

Following gene: 91790072

Centisome position: 85.75

GC content: 65.1

Gene sequence:

>1728_bases
ATGCCCACCGCCGCCGCATCCAGCCGAGCAGGCCCCGCCTTCTCCCGGGCCTTTTTTGGAGCCCGTTTATCAGGCGGCGC
ACGGTGGGCCTGCGCGCTGCTGTTGAGTTGCGGGATCAGCGGCTGCGCGTCGCTGCCCACCGAGGTCGACAGGCCGGTCT
CGCACGCCCTCGCCACCCCCACGGAAACCGCGCTAGGCCGGGCTGTCGAAGCCTGGGCCGCCAAGGCCGGCACCCGCAAC
GATTCCGGATTTGCGCTGGTGGGCAGCGCCGAGCTGGCCTTTACCAGCCGCATGGCGCTGATCCAGGCGGCGCAAAAAAC
GCTGGACATCCAGTACTACGCCATCTTTGCCGACGACACCACCCAGCGCATGTTTGAGGCGCTGCGCGAAGCCGCCAACC
GGGGCGTGCGCATCCGCATCCTGCTGGATGACTTCAACACCTCCGGCAAGAACGCCCAGGTCCTGAAGCTGGCCTTTGAG
AAAAACATCGAACTGCGCCTGTTCAACCCCTTGCCCGGCGGCCGCAGCTCGTTGTTTTTCCGGATCTTGAGCAACCTCAA
GGACGTGGACCGCATCCAGCGGCGCATGCACAACAAGATTTTCATCGCCGACAACGCCGTGGCGATCACCGGAGGCCGCA
ACCTGGGCGAGACCTATTTCGGCCAGAGCGAAAACACCAACTTTGTCGATATCGACATCCTGGCCGCCGGCCGCATCGCA
CGCGACCTGTCACGCAGCTTCGACCGATACTGGAACAACCCGCAAGCCTACCCGGTGCAGTCGCTGATGACCGCGAAGGA
AATCGAGGCCCTCAAGCCACAGGCCAGCAACGCGGTAGCCTCCCCCGGCGCCCTGCCCTCCAACCCGGATAAAACCACGG
TGGCGTCCGGCACTCCGACCGCCGCCGCAGGCAGCGTCAATCCAACCACCACAGAGCGCGTCGTCACTTCACCCGGCGGC
GCCACCACCACCCTGCCCGCGCTGCCGGAATCAACGAATTTAAGCCAGCTCACCTGGACCTGGGCGCCCTCGGTGATGCT
GGTGGACAAACCGTCCAAAATCGCCGCAGATGCCGACAGCACCGAGGAGTCGCAGGACACGGCCGTGGACGGCCTGCTGC
AACTCATGTCGCAGGCCAAAACCGACCTGCTGATCGTCACGTCCTACTTTGTGCCGGGCCCTCGCATGATGGAACAGCTG
GCCGCCATCCGCCAAAAAGGCGTCCGCATCCGCGTGCTGACCAACTCGCTGGCGTCCAACGACGCACCGGCCGCGCACGT
CGGTTATGCCCGCTACCGCAAGGCGCTGCTCGGCATGGGCATTGAACTGTATGAAATGCGCGCCGAGCAGGAAGGCTCCA
TCACCAGCTTCGGCTCATCCGGGGGCTCCACCGGCGGCTCGCGCGCCAGCCTGCATGCCAAAGTGGTGGTGATGGACGAT
CGCCTGCTGGTGGTTGGCTCGATGAACCTGGACCTGCGCTCCAAGCTGCAAAACAGCGAAGTTGCCATCATCATCCGCAG
CCGCGCGTTGTCGCAGGATGCCACGCGCCTGATCGAGCCCGCACTGGCGCGCAGCGCCTACCGGGTGGAACTGGTGGACG
GCCAACTCGTCTGGCGCGCGCCGCAAGGCTCCCAGCTGAAGGATTCGACCACCGAACCGGATGCCAGCCTGGGCCTGAAG
CTGATGCTCAAGCTGATCGGGCCGTTTGCACCGGAGGAGATGCTCTGA

Upstream 100 bases:

>100_bases
TGCAGGAGCGGACAAGCCGGGCGCCTACAGAAAGTGTAGACAGAAACCGGGGCGCCGCGGGCTCTCAAATCCCCCGGCCT
GCGCTAAAGTGGTTTGCATC

Downstream 100 bases:

>100_bases
AGAACCGTTGAAGAACCGAAGTGCGCCGTTTTTTGATGAATTCGGCTGGGGCCGGTTTTCGCTTTCGACCCCCAAGCCCG
GCAGGTTCCTAGACATGCAC

Product: phospholipase D/transphosphatidylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 575; Mature: 574

Protein sequence:

>575_residues
MPTAAASSRAGPAFSRAFFGARLSGGARWACALLLSCGISGCASLPTEVDRPVSHALATPTETALGRAVEAWAAKAGTRN
DSGFALVGSAELAFTSRMALIQAAQKTLDIQYYAIFADDTTQRMFEALREAANRGVRIRILLDDFNTSGKNAQVLKLAFE
KNIELRLFNPLPGGRSSLFFRILSNLKDVDRIQRRMHNKIFIADNAVAITGGRNLGETYFGQSENTNFVDIDILAAGRIA
RDLSRSFDRYWNNPQAYPVQSLMTAKEIEALKPQASNAVASPGALPSNPDKTTVASGTPTAAAGSVNPTTTERVVTSPGG
ATTTLPALPESTNLSQLTWTWAPSVMLVDKPSKIAADADSTEESQDTAVDGLLQLMSQAKTDLLIVTSYFVPGPRMMEQL
AAIRQKGVRIRVLTNSLASNDAPAAHVGYARYRKALLGMGIELYEMRAEQEGSITSFGSSGGSTGGSRASLHAKVVVMDD
RLLVVGSMNLDLRSKLQNSEVAIIIRSRALSQDATRLIEPALARSAYRVELVDGQLVWRAPQGSQLKDSTTEPDASLGLK
LMLKLIGPFAPEEML

Sequences:

>Translated_575_residues
MPTAAASSRAGPAFSRAFFGARLSGGARWACALLLSCGISGCASLPTEVDRPVSHALATPTETALGRAVEAWAAKAGTRN
DSGFALVGSAELAFTSRMALIQAAQKTLDIQYYAIFADDTTQRMFEALREAANRGVRIRILLDDFNTSGKNAQVLKLAFE
KNIELRLFNPLPGGRSSLFFRILSNLKDVDRIQRRMHNKIFIADNAVAITGGRNLGETYFGQSENTNFVDIDILAAGRIA
RDLSRSFDRYWNNPQAYPVQSLMTAKEIEALKPQASNAVASPGALPSNPDKTTVASGTPTAAAGSVNPTTTERVVTSPGG
ATTTLPALPESTNLSQLTWTWAPSVMLVDKPSKIAADADSTEESQDTAVDGLLQLMSQAKTDLLIVTSYFVPGPRMMEQL
AAIRQKGVRIRVLTNSLASNDAPAAHVGYARYRKALLGMGIELYEMRAEQEGSITSFGSSGGSTGGSRASLHAKVVVMDD
RLLVVGSMNLDLRSKLQNSEVAIIIRSRALSQDATRLIEPALARSAYRVELVDGQLVWRAPQGSQLKDSTTEPDASLGLK
LMLKLIGPFAPEEML
>Mature_574_residues
PTAAASSRAGPAFSRAFFGARLSGGARWACALLLSCGISGCASLPTEVDRPVSHALATPTETALGRAVEAWAAKAGTRND
SGFALVGSAELAFTSRMALIQAAQKTLDIQYYAIFADDTTQRMFEALREAANRGVRIRILLDDFNTSGKNAQVLKLAFEK
NIELRLFNPLPGGRSSLFFRILSNLKDVDRIQRRMHNKIFIADNAVAITGGRNLGETYFGQSENTNFVDIDILAAGRIAR
DLSRSFDRYWNNPQAYPVQSLMTAKEIEALKPQASNAVASPGALPSNPDKTTVASGTPTAAAGSVNPTTTERVVTSPGGA
TTTLPALPESTNLSQLTWTWAPSVMLVDKPSKIAADADSTEESQDTAVDGLLQLMSQAKTDLLIVTSYFVPGPRMMEQLA
AIRQKGVRIRVLTNSLASNDAPAAHVGYARYRKALLGMGIELYEMRAEQEGSITSFGSSGGSTGGSRASLHAKVVVMDDR
LLVVGSMNLDLRSKLQNSEVAIIIRSRALSQDATRLIEPALARSAYRVELVDGQLVWRAPQGSQLKDSTTEPDASLGLKL
MLKLIGPFAPEEML

Specific function: Unknown

COG id: COG1502

COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PLD phosphodiesterase domains [H]

Homologues:

Organism=Escherichia coli, GI87081826, Length=485, Percent_Identity=33.1958762886598, Blast_Score=232, Evalue=4e-62,
Organism=Escherichia coli, GI1787007, Length=153, Percent_Identity=30.0653594771242, Blast_Score=73, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001736 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61669; Mature: 61538

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: PS50035 PLD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTAAASSRAGPAFSRAFFGARLSGGARWACALLLSCGISGCASLPTEVDRPVSHALATP
CCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHCCCCHHCCHHHHHHCCC
TETALGRAVEAWAAKAGTRNDSGFALVGSAELAFTSRMALIQAAQKTLDIQYYAIFADDT
CHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHEEEEEEEEEECCH
TQRMFEALREAANRGVRIRILLDDFNTSGKNAQVLKLAFEKNIELRLFNPLPGGRSSLFF
HHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCEEEEEEECCCCEEEEECCCCCCHHHHHH
RILSNLKDVDRIQRRMHNKIFIADNAVAITGGRNLGETYFGQSENTNFVDIDILAAGRIA
HHHHHHHHHHHHHHHHCCEEEEECCEEEEECCCCCCHHHCCCCCCCCEEEEEEEECHHHH
RDLSRSFDRYWNNPQAYPVQSLMTAKEIEALKPQASNAVASPGALPSNPDKTTVASGTPT
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCCCCC
AAAGSVNPTTTERVVTSPGGATTTLPALPESTNLSQLTWTWAPSVMLVDKPSKIAADADS
CCCCCCCCCCCCEEEECCCCCCEECCCCCCCCCCCEEEEEECCEEEEEECCCHHCCCCCC
TEESQDTAVDGLLQLMSQAKTDLLIVTSYFVPGPRMMEQLAAIRQKGVRIRVLTNSLASN
CCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHCCCEEEEEECHHCCC
DAPAAHVGYARYRKALLGMGIELYEMRAEQEGSITSFGSSGGSTGGSRASLHAKVVVMDD
CCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCCEEECCCCCCCCCCCCEEEEEEEEEEEC
RLLVVGSMNLDLRSKLQNSEVAIIIRSRALSQDATRLIEPALARSAYRVELVDGQLVWRA
CEEEEECCCCHHHHHCCCCCEEEEEECHHCCHHHHHHHHHHHHCCEEEEEEECCEEEEEC
PQGSQLKDSTTEPDASLGLKLMLKLIGPFAPEEML
CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
PTAAASSRAGPAFSRAFFGARLSGGARWACALLLSCGISGCASLPTEVDRPVSHALATP
CCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHCCCCHHCCHHHHHHCCC
TETALGRAVEAWAAKAGTRNDSGFALVGSAELAFTSRMALIQAAQKTLDIQYYAIFADDT
CHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHEEEEEEEEEECCH
TQRMFEALREAANRGVRIRILLDDFNTSGKNAQVLKLAFEKNIELRLFNPLPGGRSSLFF
HHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCEEEEEEECCCCEEEEECCCCCCHHHHHH
RILSNLKDVDRIQRRMHNKIFIADNAVAITGGRNLGETYFGQSENTNFVDIDILAAGRIA
HHHHHHHHHHHHHHHHCCEEEEECCEEEEECCCCCCHHHCCCCCCCCEEEEEEEECHHHH
RDLSRSFDRYWNNPQAYPVQSLMTAKEIEALKPQASNAVASPGALPSNPDKTTVASGTPT
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCCCCC
AAAGSVNPTTTERVVTSPGGATTTLPALPESTNLSQLTWTWAPSVMLVDKPSKIAADADS
CCCCCCCCCCCCEEEECCCCCCEECCCCCCCCCCCEEEEEECCEEEEEECCCHHCCCCCC
TEESQDTAVDGLLQLMSQAKTDLLIVTSYFVPGPRMMEQLAAIRQKGVRIRVLTNSLASN
CCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHCCCEEEEEECHHCCC
DAPAAHVGYARYRKALLGMGIELYEMRAEQEGSITSFGSSGGSTGGSRASLHAKVVVMDD
CCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCCEEECCCCCCCCCCCCEEEEEEEEEEEC
RLLVVGSMNLDLRSKLQNSEVAIIIRSRALSQDATRLIEPALARSAYRVELVDGQLVWRA
CEEEEECCCCHHHHHCCCCCEEEEEECHHCCHHHHHHHHHHHHCCEEEEEEECCEEEEEC
PQGSQLKDSTTEPDASLGLKLMLKLIGPFAPEEML
CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]