| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91790056
Identifier: 91790056
GI number: 91790056
Start: 4437686
End: 4439632
Strand: Direct
Name: 91790056
Synonym: Bpro_4218
Alternate gene names: NA
Gene position: 4437686-4439632 (Clockwise)
Preceding gene: 91790055
Following gene: 91790062
Centisome position: 85.34
GC content: 65.49
Gene sequence:
>1947_bases ATGAGCTGGCAACCCATAGCCCACGGGGCCCATGTCAACTGGGCCCAGCCTGACCCCCTGACGGGGCTGGACCCCTACCT GGTCTGGGCCGATGGCTGCGGCTTTGCGCCCTATGGCGGCCTGAAACCGCCTGGCAAGATTGCCACGCTGATCGAGCTCA AAGCGGGCAAGACGGTGGCTGACCTGGTGGCGCAGTCCGGCGGTGGCGTGCAACTTGCCGATATTCCGGGCGTTTATCGC GCGCCAGGCGCACAGCCGCGGTTTTTAACGGCCTGGCCGACGGCAGCCTTCTTCGAGAGACTGAAAACCACGCTGGAAGA CGTCGTGGCGCGCGCGGAAATCAGCCTGCCCGTGGTACCCGAACGTCCGAAGTTCGCTCCGCCCGCCGCCCCTACCTGCG GCCCGGCCGTTGATCGGGGCATTCAGCGCAAAACCCTCATCGGGGTGATTGACGATGGCTGCGCGTTCGCCCACTACCAC TTGCGCGACTCGGCCGGCAACACGCGGGTCTGCCGGCTGTGGGACCAGGAGCAGCATGGCGCGTTTGCGCACCAGGGCGT GGTGCCCACAGACTTTGGCCGCGGCCATGAAGTCTCGGGAGCCCAGTTGCAAAACCTCATTGACCAATTCACCCGTAACG ATGCGCTGGACGAAGACGCCTGCTACGCCACCGCCGACTACGACCGCCTGCGCCGAGCCGCCACGCATGGCGCGCATATC ACCGATGTCTTCGCCGGCCAGGTGCCGGTGGGCTCGCTGGTCGGCAGTGCCACCATGCCGCCCAGCTGGGCCGACGCCAA CGACGTTGCTTCCAGTGATGAGGCGGGCATCGTCTTTGTGCAGTTGCCCCGTGCCTGCCTGCAGGACCCTTCCGGCGCGT GGCTGGACGTGCATGTGCTGGACGCCCTTCGCTACATCCTGAGTTGTGCCGACGGGGAGACCGAGCAAATCATCATCAAC CTGAGTTTCGGCCCGCAGCGCGGCCCCAATGACGGTACGGCGATGCTGGAAAAAGCGTTCGATGAACTGGGGGCGGAGTT TCCCAGCCTCACGCTGACCGTGGCGGCCGGCAACAGCTTTTCGACACGAGGGCACGCCATGTTCGAGCTCGAGGCGGGTG TCAGCAAGACCCTGCATTGGCAAGTCATGCCCGGCGATGAAACGCCCAGCTTTGTCCAGCTCTGGCTACCGCAGGACGCG CATCAGGTGGAAGTCAAAATCACACCGCCCGGCCTGCCTGCCAGCCCGTGGATCAAACCGGGCGATGCCATCGTATCGCC CAGCACGGCGAACCCCTCCTGCGGCGTGATCTACGCGCCGCATACCTCGCGCGGCAATCACGGCACCATGGTGCTGGTGG CCCTGTCGCCCTGTTCCAGCTTCAAGAGCAAGCCGCTTGCACCACACGGTATCTGGATGGTTGAAGTCAACAACAAGGCA GCAACGCCGCTGAGCCAGCCGGTTCATGCCTGGGTAGACCGTGACGACTTCAACCTGGGCACCATGGTCCGGGGCCGGCA GTCTTACTTTGTGGACCCGCTGTACGACCCTTTGCGCTACCTGAAATCGGCCACTGACGATACGCCAGGCAGCGCTGCGC TGGTACGCCGGCGCGGTACTTTGACCGGCATTGCCACCGGAACCGGGGCGCTGGTTGCGGCAGGTTACCGTCACAGCGAC CGCAAGCATGTGCGCTACTCGTCGGCCGGACCGACACGCGGACCACGAGTGGGCCCCGATTGCGGCGCTGTCACCGATCA GAGTCGCAGCCTGCCGGGGCTGTTGGCGGCCGGCACGCGGGGAGCCTCAGTGGTTCGGTTGGTGGGCACCAGTGTGGCAG CACCCCAATTGGCACGCTGGGCTGCCAACGAAAAGCCGCCACCAGGGCCGGTTCCGCCGCTGAACCCGGATCCCCAGCTC GAGGGTAGCGGCTTGCTGCCGCTTTAA
Upstream 100 bases:
>100_bases TTTACAAACCCTTTGGCACCAATGACACGGCGGCAGTTAGCGGCGTGCTCAAGTACATGTGGAACAAGGCTCTGAAAGAG TGGGAAGACGTGAAGTTCAA
Downstream 100 bases:
>100_bases ATTGCACCTATGCCGGAGCTGGGCGGCAGCCCGGTCAGCGGTGCGGGGGCGAGGTAAATGCCGGGGGAATAACTACCAGC GCAGGGGCAGCTTCTTGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 648; Mature: 647
Protein sequence:
>648_residues MSWQPIAHGAHVNWAQPDPLTGLDPYLVWADGCGFAPYGGLKPPGKIATLIELKAGKTVADLVAQSGGGVQLADIPGVYR APGAQPRFLTAWPTAAFFERLKTTLEDVVARAEISLPVVPERPKFAPPAAPTCGPAVDRGIQRKTLIGVIDDGCAFAHYH LRDSAGNTRVCRLWDQEQHGAFAHQGVVPTDFGRGHEVSGAQLQNLIDQFTRNDALDEDACYATADYDRLRRAATHGAHI TDVFAGQVPVGSLVGSATMPPSWADANDVASSDEAGIVFVQLPRACLQDPSGAWLDVHVLDALRYILSCADGETEQIIIN LSFGPQRGPNDGTAMLEKAFDELGAEFPSLTLTVAAGNSFSTRGHAMFELEAGVSKTLHWQVMPGDETPSFVQLWLPQDA HQVEVKITPPGLPASPWIKPGDAIVSPSTANPSCGVIYAPHTSRGNHGTMVLVALSPCSSFKSKPLAPHGIWMVEVNNKA ATPLSQPVHAWVDRDDFNLGTMVRGRQSYFVDPLYDPLRYLKSATDDTPGSAALVRRRGTLTGIATGTGALVAAGYRHSD RKHVRYSSAGPTRGPRVGPDCGAVTDQSRSLPGLLAAGTRGASVVRLVGTSVAAPQLARWAANEKPPPGPVPPLNPDPQL EGSGLLPL
Sequences:
>Translated_648_residues MSWQPIAHGAHVNWAQPDPLTGLDPYLVWADGCGFAPYGGLKPPGKIATLIELKAGKTVADLVAQSGGGVQLADIPGVYR APGAQPRFLTAWPTAAFFERLKTTLEDVVARAEISLPVVPERPKFAPPAAPTCGPAVDRGIQRKTLIGVIDDGCAFAHYH LRDSAGNTRVCRLWDQEQHGAFAHQGVVPTDFGRGHEVSGAQLQNLIDQFTRNDALDEDACYATADYDRLRRAATHGAHI TDVFAGQVPVGSLVGSATMPPSWADANDVASSDEAGIVFVQLPRACLQDPSGAWLDVHVLDALRYILSCADGETEQIIIN LSFGPQRGPNDGTAMLEKAFDELGAEFPSLTLTVAAGNSFSTRGHAMFELEAGVSKTLHWQVMPGDETPSFVQLWLPQDA HQVEVKITPPGLPASPWIKPGDAIVSPSTANPSCGVIYAPHTSRGNHGTMVLVALSPCSSFKSKPLAPHGIWMVEVNNKA ATPLSQPVHAWVDRDDFNLGTMVRGRQSYFVDPLYDPLRYLKSATDDTPGSAALVRRRGTLTGIATGTGALVAAGYRHSD RKHVRYSSAGPTRGPRVGPDCGAVTDQSRSLPGLLAAGTRGASVVRLVGTSVAAPQLARWAANEKPPPGPVPPLNPDPQL EGSGLLPL >Mature_647_residues SWQPIAHGAHVNWAQPDPLTGLDPYLVWADGCGFAPYGGLKPPGKIATLIELKAGKTVADLVAQSGGGVQLADIPGVYRA PGAQPRFLTAWPTAAFFERLKTTLEDVVARAEISLPVVPERPKFAPPAAPTCGPAVDRGIQRKTLIGVIDDGCAFAHYHL RDSAGNTRVCRLWDQEQHGAFAHQGVVPTDFGRGHEVSGAQLQNLIDQFTRNDALDEDACYATADYDRLRRAATHGAHIT DVFAGQVPVGSLVGSATMPPSWADANDVASSDEAGIVFVQLPRACLQDPSGAWLDVHVLDALRYILSCADGETEQIIINL SFGPQRGPNDGTAMLEKAFDELGAEFPSLTLTVAAGNSFSTRGHAMFELEAGVSKTLHWQVMPGDETPSFVQLWLPQDAH QVEVKITPPGLPASPWIKPGDAIVSPSTANPSCGVIYAPHTSRGNHGTMVLVALSPCSSFKSKPLAPHGIWMVEVNNKAA TPLSQPVHAWVDRDDFNLGTMVRGRQSYFVDPLYDPLRYLKSATDDTPGSAALVRRRGTLTGIATGTGALVAAGYRHSDR KHVRYSSAGPTRGPRVGPDCGAVTDQSRSLPGLLAAGTRGASVVRLVGTSVAAPQLARWAANEKPPPGPVPPLNPDPQLE GSGLLPL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68767; Mature: 68636
Theoretical pI: Translated: 6.46; Mature: 6.46
Prosite motif: PS00136 SUBTILASE_ASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWQPIAHGAHVNWAQPDPLTGLDPYLVWADGCGFAPYGGLKPPGKIATLIELKAGKTVA CCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCHHH DLVAQSGGGVQLADIPGVYRAPGAQPRFLTAWPTAAFFERLKTTLEDVVARAEISLPVVP HHHHCCCCCEEEEECCCHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCC ERPKFAPPAAPTCGPAVDRGIQRKTLIGVIDDGCAFAHYHLRDSAGNTRVCRLWDQEQHG CCCCCCCCCCCCCCHHHHCCCCCEEEEEEEECCCEEEEEEEECCCCCCEEEEECCCCCCC AFAHQGVVPTDFGRGHEVSGAQLQNLIDQFTRNDALDEDACYATADYDRLRRAATHGAHI CHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHCCCEE TDVFAGQVPVGSLVGSATMPPSWADANDVASSDEAGIVFVQLPRACLQDPSGAWLDVHVL EEEECCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHCCCCCCEEEEHHH DALRYILSCADGETEQIIINLSFGPQRGPNDGTAMLEKAFDELGAEFPSLTLTVAAGNSF HHHHHHHHCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCC STRGHAMFELEAGVSKTLHWQVMPGDETPSFVQLWLPQDAHQVEVKITPPGLPASPWIKP CCCCCEEEEECCCCCCEEEEEEECCCCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCC GDAIVSPSTANPSCGVIYAPHTSRGNHGTMVLVALSPCSSFKSKPLAPHGIWMVEVNNKA CCCEECCCCCCCCCCEEECCCCCCCCCCCEEEEEECCCHHHCCCCCCCCCEEEEEECCCC ATPLSQPVHAWVDRDDFNLGTMVRGRQSYFVDPLYDPLRYLKSATDDTPGSAALVRRRGT CCCCCCCHHHHCCCCCCCCCCEEECCCCEECCHHHHHHHHHHHCCCCCCCCHHHEEECCC LTGIATGTGALVAAGYRHSDRKHVRYSSAGPTRGPRVGPDCGAVTDQSRSLPGLLAAGTR EEEEECCCCCEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCC GASVVRLVGTSVAAPQLARWAANEKPPPGPVPPLNPDPQLEGSGLLPL CCEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SWQPIAHGAHVNWAQPDPLTGLDPYLVWADGCGFAPYGGLKPPGKIATLIELKAGKTVA CCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCHHH DLVAQSGGGVQLADIPGVYRAPGAQPRFLTAWPTAAFFERLKTTLEDVVARAEISLPVVP HHHHCCCCCEEEEECCCHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCC ERPKFAPPAAPTCGPAVDRGIQRKTLIGVIDDGCAFAHYHLRDSAGNTRVCRLWDQEQHG CCCCCCCCCCCCCCHHHHCCCCCEEEEEEEECCCEEEEEEEECCCCCCEEEEECCCCCCC AFAHQGVVPTDFGRGHEVSGAQLQNLIDQFTRNDALDEDACYATADYDRLRRAATHGAHI CHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHCCCEE TDVFAGQVPVGSLVGSATMPPSWADANDVASSDEAGIVFVQLPRACLQDPSGAWLDVHVL EEEECCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHCCCCCCEEEEHHH DALRYILSCADGETEQIIINLSFGPQRGPNDGTAMLEKAFDELGAEFPSLTLTVAAGNSF HHHHHHHHCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCC STRGHAMFELEAGVSKTLHWQVMPGDETPSFVQLWLPQDAHQVEVKITPPGLPASPWIKP CCCCCEEEEECCCCCCEEEEEEECCCCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCC GDAIVSPSTANPSCGVIYAPHTSRGNHGTMVLVALSPCSSFKSKPLAPHGIWMVEVNNKA CCCEECCCCCCCCCCEEECCCCCCCCCCCEEEEEECCCHHHCCCCCCCCCEEEEEECCCC ATPLSQPVHAWVDRDDFNLGTMVRGRQSYFVDPLYDPLRYLKSATDDTPGSAALVRRRGT CCCCCCCHHHHCCCCCCCCCCEEECCCCEECCHHHHHHHHHHHCCCCCCCCHHHEEECCC LTGIATGTGALVAAGYRHSDRKHVRYSSAGPTRGPRVGPDCGAVTDQSRSLPGLLAAGTR EEEEECCCCCEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCC GASVVRLVGTSVAAPQLARWAANEKPPPGPVPPLNPDPQLEGSGLLPL CCEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA