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The map label for this gene is bkdR [H]

Identifier: 91790050

GI number: 91790050

Start: 4431058

End: 4431531

Strand: Reverse

Name: bkdR [H]

Synonym: Bpro_4212

Alternate gene names: 91790050

Gene position: 4431531-4431058 (Counterclockwise)

Preceding gene: 91790057

Following gene: 91790049

Centisome position: 85.22

GC content: 62.24

Gene sequence:

>474_bases
ATGGAAACACTGGACAAGCTTGATCGACATATTTTGCGCAGCCTGCAAGCTGACGGGCGGGCAACCTATGACCAGCTCGC
CGAGCAGGTCAGCCTGTCGCCCAGTGCCGTGCTGCGGCGCGTGAAGCGGCTGGAGGAGGCCGGGGTCATTGACCGCTACG
TCGCGCTGGTCAAGCCCGAGTCGGTTGGTTTGGGGCTGACCGCTTACCTCAATGTCCGGCTGGAGAAGCACACCGAAAGC
CACAAGCGCAACCCGATGGACCTGTTTCGTGCCAGCGTGCAAACCTGGCCCGAGGTCGTGGAGTGTGCGGCCCTGACGGG
TGAGATGGACTACCTGCTGCGCGTGGTGGTACAGGACATGGCGCACTACAGCCGCTTTATCATGGACACCCTGCTCAAGC
ACCCCAGCGTGCAGGACTGCAAAACCAGTTTTGTGCTGGACCGGGTGAAAGCGACGACGGCCGTGCCGCTGTAG

Upstream 100 bases:

>100_bases
CAGCTTCAAGAGGCAACTTTAGCGGCGCTGGCGGTCTTTTTTATTGCAAACTGGGGCGTGTAAATTGCCATTGACGCAAC
AAACCTGCAAAATATCGAGA

Downstream 100 bases:

>100_bases
CAGGTCGGCCGGCTGAGCCGCCCGGAGCCGGTGGTTTTGGGGAAATGGCAGACATTCAGCGCCTGCAAATGTTGCTGCGC
CGCAACATTTTTAGGGTTGG

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
METLDKLDRHILRSLQADGRATYDQLAEQVSLSPSAVLRRVKRLEEAGVIDRYVALVKPESVGLGLTAYLNVRLEKHTES
HKRNPMDLFRASVQTWPEVVECAALTGEMDYLLRVVVQDMAHYSRFIMDTLLKHPSVQDCKTSFVLDRVKATTAVPL

Sequences:

>Translated_157_residues
METLDKLDRHILRSLQADGRATYDQLAEQVSLSPSAVLRRVKRLEEAGVIDRYVALVKPESVGLGLTAYLNVRLEKHTES
HKRNPMDLFRASVQTWPEVVECAALTGEMDYLLRVVVQDMAHYSRFIMDTLLKHPSVQDCKTSFVLDRVKATTAVPL
>Mature_157_residues
METLDKLDRHILRSLQADGRATYDQLAEQVSLSPSAVLRRVKRLEEAGVIDRYVALVKPESVGLGLTAYLNVRLEKHTES
HKRNPMDLFRASVQTWPEVVECAALTGEMDYLLRVVVQDMAHYSRFIMDTLLKHPSVQDCKTSFVLDRVKATTAVPL

Specific function: Positive regulator of the bkd operon for branched-chain keto acid dehydrogenase complex [H]

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787116, Length=150, Percent_Identity=36.6666666666667, Blast_Score=108, Evalue=2e-25,
Organism=Escherichia coli, GI87081742, Length=155, Percent_Identity=38.0645161290323, Blast_Score=106, Evalue=9e-25,
Organism=Escherichia coli, GI1790182, Length=143, Percent_Identity=26.5734265734266, Blast_Score=61, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 17794; Mature: 17794

Theoretical pI: Translated: 7.63; Mature: 7.63

Prosite motif: PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METLDKLDRHILRSLQADGRATYDQLAEQVSLSPSAVLRRVKRLEEAGVIDRYVALVKPE
CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHCCC
SVGLGLTAYLNVRLEKHTESHKRNPMDLFRASVQTWPEVVECAALTGEMDYLLRVVVQDM
CCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AHYSRFIMDTLLKHPSVQDCKTSFVLDRVKATTAVPL
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
METLDKLDRHILRSLQADGRATYDQLAEQVSLSPSAVLRRVKRLEEAGVIDRYVALVKPE
CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHCCC
SVGLGLTAYLNVRLEKHTESHKRNPMDLFRASVQTWPEVVECAALTGEMDYLLRVVVQDM
CCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AHYSRFIMDTLLKHPSVQDCKTSFVLDRVKATTAVPL
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8320210 [H]