| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is mauR [H]
Identifier: 91790016
GI number: 91790016
Start: 4393001
End: 4393885
Strand: Direct
Name: mauR [H]
Synonym: Bpro_4178
Alternate gene names: 91790016
Gene position: 4393001-4393885 (Clockwise)
Preceding gene: 91790010
Following gene: 91790018
Centisome position: 84.48
GC content: 65.08
Gene sequence:
>885_bases ATGAATGCAGCAACGCAATACAAACTCAGCGCCCCGGATATCGAGGTCGTGCTCGCGCTGGTGCGGGCCAACACCCTGGC CGAAGCCGGTGAGCGGCTCGCGGTGGACGCGTCGACGGTTTTCCGTTCGCTGCAGCGCATCGAGAAGGGTCTGGGCCAGC GTCTGTTCGAACGCTCAAGGACTGGCTACCAGCCACTGGAACTGGCGCAGGTGCTGGCAAGCCACGGCGAGCAACTGGAG GTGCAGCTGGAGTCGGCCCGTTCTGCCGCGCAGGCCAGTCCCGAACAGGTCTCCGGCAGCGTGCGCCTGACCACCACCGA TACCGTGCTGCATGGCCTGGTCGCGCCGGCGCTCAAGTTGCTGCAGTCAACCCACCCGCTGCTGGTCTACGAGTTGCACG CGGGAAACGAGTTGGCCAGCCTCACGCGGCGCGATGCCGACATTGCCGTGCGTGCTACCAAGCGGCCGCCGCAGCACCTG GTGGGCAAGCATGTCGGTCCGATCCGGGTGGCGCTGTTTGCCGCAAAAAAAGGCGGCCCCAGGGGCTTCGATGCCGACGT GGCCAGCAAAGTCGACTGGATCGCCCCGGATGACGCCTTGCCGGAGCACCCCTCAGTGGTCTGGCGCAAGAAGCATTTCC CCAAGGTGTCGCCGCGCTATCGGGTCAGCAGCATACTCACCGTCGCGGAAATGGTGGCGCAAGGCATGGGCATCGGGTTG TTGCCGCTTTTTCTTGCGCAAGGCCGGGCCGACCTGGTGGCCTTAACAGGCGCGCTGGATGAGTGTCAGACCGAACTCTG GCTGTTGACGCATACCGAATCGCGGCACCTGCGGCGGGTCTCCACGGTGTTCAGCCATCTGGCTCAACACATGGCGCTGC GCTGA
Upstream 100 bases:
>100_bases TTGCATTGCTCCATTGAGTTGATTGAAGAGAGATTGATGGGACTGATGGAGGTAATGTAGGATTGCAATGAAGCAATGAA AATAGGCACGAGTGCAATCC
Downstream 100 bases:
>100_bases GAGCTACGCGGGCCAATGCTGCTGCGTTTTGCCGTCAGCACCGCGTGGCCTTTCTAGTCGACCACCCTGGCACGCGACAA GGCACGCGAGAGCGCCGACA
Product: LysR family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 294; Mature: 294
Protein sequence:
>294_residues MNAATQYKLSAPDIEVVLALVRANTLAEAGERLAVDASTVFRSLQRIEKGLGQRLFERSRTGYQPLELAQVLASHGEQLE VQLESARSAAQASPEQVSGSVRLTTTDTVLHGLVAPALKLLQSTHPLLVYELHAGNELASLTRRDADIAVRATKRPPQHL VGKHVGPIRVALFAAKKGGPRGFDADVASKVDWIAPDDALPEHPSVVWRKKHFPKVSPRYRVSSILTVAEMVAQGMGIGL LPLFLAQGRADLVALTGALDECQTELWLLTHTESRHLRRVSTVFSHLAQHMALR
Sequences:
>Translated_294_residues MNAATQYKLSAPDIEVVLALVRANTLAEAGERLAVDASTVFRSLQRIEKGLGQRLFERSRTGYQPLELAQVLASHGEQLE VQLESARSAAQASPEQVSGSVRLTTTDTVLHGLVAPALKLLQSTHPLLVYELHAGNELASLTRRDADIAVRATKRPPQHL VGKHVGPIRVALFAAKKGGPRGFDADVASKVDWIAPDDALPEHPSVVWRKKHFPKVSPRYRVSSILTVAEMVAQGMGIGL LPLFLAQGRADLVALTGALDECQTELWLLTHTESRHLRRVSTVFSHLAQHMALR >Mature_294_residues MNAATQYKLSAPDIEVVLALVRANTLAEAGERLAVDASTVFRSLQRIEKGLGQRLFERSRTGYQPLELAQVLASHGEQLE VQLESARSAAQASPEQVSGSVRLTTTDTVLHGLVAPALKLLQSTHPLLVYELHAGNELASLTRRDADIAVRATKRPPQHL VGKHVGPIRVALFAAKKGGPRGFDADVASKVDWIAPDDALPEHPSVVWRKKHFPKVSPRYRVSSILTVAEMVAQGMGIGL LPLFLAQGRADLVALTGALDECQTELWLLTHTESRHLRRVSTVFSHLAQHMALR
Specific function: Transcriptional activator of the mau genes involved in methylamine metabolism [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000847 - InterPro: IPR005119 - InterPro: IPR011991 [H]
Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]
EC number: NA
Molecular weight: Translated: 32058; Mature: 32058
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: PS50931 HTH_LYSR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAATQYKLSAPDIEVVLALVRANTLAEAGERLAVDASTVFRSLQRIEKGLGQRLFERSR CCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHC TGYQPLELAQVLASHGEQLEVQLESARSAAQASPEQVSGSVRLTTTDTVLHGLVAPALKL CCCCHHHHHHHHHCCCCEEEEEHHHHHHHHHCCHHHHCCCEEEEEHHHHHHHHHHHHHHH LQSTHPLLVYELHAGNELASLTRRDADIAVRATKRPPQHLVGKHVGPIRVALFAAKKGGP HHCCCCEEEEEECCCCHHHHHHHCCCCEEEEECCCCHHHHHHCCCCHHHEEEEEECCCCC RGFDADVASKVDWIAPDDALPEHPSVVWRKKHFPKVSPRYRVSSILTVAEMVAQGMGIGL CCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHH LPLFLAQGRADLVALTGALDECQTELWLLTHTESRHLRRVSTVFSHLAQHMALR HHHHHHCCCCHHHHHHCCHHHHCHHEEEEEECCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNAATQYKLSAPDIEVVLALVRANTLAEAGERLAVDASTVFRSLQRIEKGLGQRLFERSR CCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHC TGYQPLELAQVLASHGEQLEVQLESARSAAQASPEQVSGSVRLTTTDTVLHGLVAPALKL CCCCHHHHHHHHHCCCCEEEEEHHHHHHHHHCCHHHHCCCEEEEEHHHHHHHHHHHHHHH LQSTHPLLVYELHAGNELASLTRRDADIAVRATKRPPQHLVGKHVGPIRVALFAAKKGGP HHCCCCEEEEEECCCCHHHHHHHCCCCEEEEECCCCHHHHHHCCCCHHHEEEEEECCCCC RGFDADVASKVDWIAPDDALPEHPSVVWRKKHFPKVSPRYRVSSILTVAEMVAQGMGIGL CCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHH LPLFLAQGRADLVALTGALDECQTELWLLTHTESRHLRRVSTVFSHLAQHMALR HHHHHHCCCCHHHHHHCCHHHHCHHEEEEEECCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7957249 [H]