| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is ahcY [H]
Identifier: 91789971
GI number: 91789971
Start: 4337432
End: 4338871
Strand: Reverse
Name: ahcY [H]
Synonym: Bpro_4132
Alternate gene names: 91789971
Gene position: 4338871-4337432 (Counterclockwise)
Preceding gene: 91789973
Following gene: 91789970
Centisome position: 83.44
GC content: 61.53
Gene sequence:
>1440_bases ATGAGCGCTGTCCTGAAACCCGTATCTGCCGCCGCCGACCACATCATTGCCGACCTGTCGCTCGCCGACTGGGGCCGCAA GGAACTGAACATTGCCCAGACCGAGATGCCCGGCCTGATGGCCATTCGCGAAGAATTCGCCAAGGCACAGCCCCTGAAGG GCGCGCGCATCACCGGCTCACTGCACATGACCATCCAGACCGGCGTGCTGATCGAGACGCTGCAGGCGCTGGGCGCCGAC GTGCGCTGGGCTTCGTGCAACATTTTCTCGACGCAGGACCATGCCGCCGCCGCGATTGCCGCCAAGGGCACGCCGGTGTT TGCCATCAAGGGCGAGACCCTGGCCGACTACTGGGACTACACCCACAGGATCTTCGAATTCAGCGGTGCCAAGGGCACGC CTGAAGAAGGCCCGAACATGATCCTGGACGACGGCGGCGATGCCACGCTGCTGATGCACCTGGGCACCAAGGCCGAAAAA GACGCCAGCCTGATCTCCAAGCCGACCAGCGAAGAAGAAATCTGCCTGTTCAACTCGATCAAGGCCAAACTGGCGCAAGA TCCGACCTGGTACAGCCGCCGCCTGAAGAACATCATCGGCGTGACCGAAGAAACCACCACCGGCGTGCTGCGCCTCAATG AAATGTCGGCCAAGGGCACGCTGGCCCTGCGCGCCATCAACGTCAACGACTCGGTCACCAAGTCCAAGTTCGACAACCTC TACGGTTGCCGCGAGTCGCTGGTCGACGCCATCAAGCGCGCCACCGACGTGATGGTGGCCGGCAAGGTGGCTTGCGTGGC CGGTTACGGCGACGTGGGCAAGGGCTCGGCCCAGGCCCTGCGTGCCCTGAGCGCCCAGGTGTGGGTGACCGAGATCGATC CGATCAACGCCCTGCAGGCCGCGATGGAAGGCTACAAGGTCGTGACCATGGAATACGCCGCCGACAAGGCCGACATCTTT GTGTCCGCCACCGGCAACAAGAACGTCATCACCTACGAGCACATGGCGAAGATGAAAGATCAGGCCATCGTCTGCAACAT CGGCCATTTCGACAATGAAATCGACGTCGCCTCGCTGGAAAAATGCACCTGGGAAGAGATCAAGCCGCAAGTCGATCACG TGATCTTCCCCGATGGCAAACGCATCATCCTGCTGGCCAAGGGCCGCCTGGTGAACCTGGGCTGCGGCACCGGCCACCCC AGCTTCGTGATGTCGTCCAGCTTTGCCAACCAGACCATTGCGCAGATCGAGTTGTTCACCAAGCAGGCCGACTACGAAGT GGGCAAGGTCTATGTGCTGCCCAAGCACCTCGATGAAAAGGTCGCGCGTTTGCACCTCAAGAAGGTCGGCGCGATGCTGA CCGAGTTGAGCGACGAGCAGGCGGCTTATATCGGTGTGTCGAAGGCAGGCCCGTACAAGGCCAACACCTACCGCTATTGA
Upstream 100 bases:
>100_bases ATGTGCTCTCAAGCCGGGTGAATGACTGAATTCTCCCGCCCCCGAAAGCCCCATGCCCGTGGCGATTTTGCCCAGTTGAC GTTTGAATTTGGAGAACCGT
Downstream 100 bases:
>100_bases TCAAGCGGCGGGTATTCCTCCCTCTCCCCCTGGGAGAGGGCAGGGGTGAGGGCTGGCGGCGTCAGTTGTCAAGCGAGCTT TTTTAAGGCCGCTGGCCTTC
Product: S-adenosyl-L-homocysteine hydrolase
Products: NA
Alternate protein names: S-adenosyl-L-homocysteine hydrolase; AdoHcyase [H]
Number of amino acids: Translated: 479; Mature: 478
Protein sequence:
>479_residues MSAVLKPVSAAADHIIADLSLADWGRKELNIAQTEMPGLMAIREEFAKAQPLKGARITGSLHMTIQTGVLIETLQALGAD VRWASCNIFSTQDHAAAAIAAKGTPVFAIKGETLADYWDYTHRIFEFSGAKGTPEEGPNMILDDGGDATLLMHLGTKAEK DASLISKPTSEEEICLFNSIKAKLAQDPTWYSRRLKNIIGVTEETTTGVLRLNEMSAKGTLALRAINVNDSVTKSKFDNL YGCRESLVDAIKRATDVMVAGKVACVAGYGDVGKGSAQALRALSAQVWVTEIDPINALQAAMEGYKVVTMEYAADKADIF VSATGNKNVITYEHMAKMKDQAIVCNIGHFDNEIDVASLEKCTWEEIKPQVDHVIFPDGKRIILLAKGRLVNLGCGTGHP SFVMSSSFANQTIAQIELFTKQADYEVGKVYVLPKHLDEKVARLHLKKVGAMLTELSDEQAAYIGVSKAGPYKANTYRY
Sequences:
>Translated_479_residues MSAVLKPVSAAADHIIADLSLADWGRKELNIAQTEMPGLMAIREEFAKAQPLKGARITGSLHMTIQTGVLIETLQALGAD VRWASCNIFSTQDHAAAAIAAKGTPVFAIKGETLADYWDYTHRIFEFSGAKGTPEEGPNMILDDGGDATLLMHLGTKAEK DASLISKPTSEEEICLFNSIKAKLAQDPTWYSRRLKNIIGVTEETTTGVLRLNEMSAKGTLALRAINVNDSVTKSKFDNL YGCRESLVDAIKRATDVMVAGKVACVAGYGDVGKGSAQALRALSAQVWVTEIDPINALQAAMEGYKVVTMEYAADKADIF VSATGNKNVITYEHMAKMKDQAIVCNIGHFDNEIDVASLEKCTWEEIKPQVDHVIFPDGKRIILLAKGRLVNLGCGTGHP SFVMSSSFANQTIAQIELFTKQADYEVGKVYVLPKHLDEKVARLHLKKVGAMLTELSDEQAAYIGVSKAGPYKANTYRY >Mature_478_residues SAVLKPVSAAADHIIADLSLADWGRKELNIAQTEMPGLMAIREEFAKAQPLKGARITGSLHMTIQTGVLIETLQALGADV RWASCNIFSTQDHAAAAIAAKGTPVFAIKGETLADYWDYTHRIFEFSGAKGTPEEGPNMILDDGGDATLLMHLGTKAEKD ASLISKPTSEEEICLFNSIKAKLAQDPTWYSRRLKNIIGVTEETTTGVLRLNEMSAKGTLALRAINVNDSVTKSKFDNLY GCRESLVDAIKRATDVMVAGKVACVAGYGDVGKGSAQALRALSAQVWVTEIDPINALQAAMEGYKVVTMEYAADKADIFV SATGNKNVITYEHMAKMKDQAIVCNIGHFDNEIDVASLEKCTWEEIKPQVDHVIFPDGKRIILLAKGRLVNLGCGTGHPS FVMSSSFANQTIAQIELFTKQADYEVGKVYVLPKHLDEKVARLHLKKVGAMLTELSDEQAAYIGVSKAGPYKANTYRY
Specific function: May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine [H]
COG id: COG0499
COG function: function code H; S-adenosylhomocysteine hydrolase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenosylhomocysteinase family [H]
Homologues:
Organism=Homo sapiens, GI9951915, Length=467, Percent_Identity=57.3875802997859, Blast_Score=496, Evalue=1e-140, Organism=Homo sapiens, GI239937451, Length=447, Percent_Identity=57.2706935123042, Blast_Score=469, Evalue=1e-132, Organism=Homo sapiens, GI24308043, Length=471, Percent_Identity=47.9830148619958, Blast_Score=442, Evalue=1e-124, Organism=Homo sapiens, GI298286489, Length=476, Percent_Identity=47.6890756302521, Blast_Score=442, Evalue=1e-124, Organism=Homo sapiens, GI195539337, Length=471, Percent_Identity=47.9830148619958, Blast_Score=442, Evalue=1e-124, Organism=Homo sapiens, GI195539349, Length=476, Percent_Identity=47.6890756302521, Blast_Score=441, Evalue=1e-124, Organism=Homo sapiens, GI21361647, Length=472, Percent_Identity=46.8220338983051, Blast_Score=416, Evalue=1e-116, Organism=Caenorhabditis elegans, GI17506425, Length=469, Percent_Identity=58.4221748400853, Blast_Score=509, Evalue=1e-144, Organism=Saccharomyces cerevisiae, GI6320882, Length=488, Percent_Identity=56.1475409836066, Blast_Score=492, Evalue=1e-140, Organism=Drosophila melanogaster, GI24642172, Length=467, Percent_Identity=58.8865096359743, Blast_Score=510, Evalue=1e-145, Organism=Drosophila melanogaster, GI24656245, Length=458, Percent_Identity=50.4366812227074, Blast_Score=441, Evalue=1e-124, Organism=Drosophila melanogaster, GI45553387, Length=473, Percent_Identity=47.568710359408, Blast_Score=413, Evalue=1e-115, Organism=Drosophila melanogaster, GI45553385, Length=472, Percent_Identity=47.4576271186441, Blast_Score=410, Evalue=1e-115,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000043 - InterPro: IPR015878 - InterPro: IPR020082 [H]
Pfam domain/function: PF05221 AdoHcyase; PF00670 AdoHcyase_NAD [H]
EC number: =3.3.1.1 [H]
Molecular weight: Translated: 52023; Mature: 51892
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: PS00738 ADOHCYASE_1 ; PS00739 ADOHCYASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAVLKPVSAAADHIIADLSLADWGRKELNIAQTEMPGLMAIREEFAKAQPLKGARITGS CCCHHHHHHHHHHHHHEECCHHCCCCCCCCEEHHCCCHHHHHHHHHHHCCCCCCCEEEEE LHMTIQTGVLIETLQALGADVRWASCNIFSTQDHAAAAIAAKGTPVFAIKGETLADYWDY EEEEEECCHHHHHHHHHCCCCEEEEEEEECCCCCCEEEEEECCCEEEEEECCHHHHHHHH THRIFEFSGAKGTPEEGPNMILDDGGDATLLMHLGTKAEKDASLISKPTSEEEICLFNSI HHHHEEECCCCCCCCCCCCEEEECCCCEEEEEEECCCCCCCHHHHCCCCCCCCEEEHHHH KAKLAQDPTWYSRRLKNIIGVTEETTTGVLRLNEMSAKGTLALRAINVNDSVTKSKFDNL HHHHCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCEEEEEEEECCCCHHHHHHHHH YGCRESLVDAIKRATDVMVAGKVACVAGYGDVGKGSAQALRALSAQVWVTEIDPINALQA HHHHHHHHHHHHHHHHEEEECCEEEEECCCCCCCCHHHHHHHHHHEEEEEECCCHHHHHH AMEGYKVVTMEYAADKADIFVSATGNKNVITYEHMAKMKDQAIVCNIGHFDNEIDVASLE HHCCCEEEEEEECCCCCEEEEEECCCCCEEEHHHHHHCCCCEEEEEECCCCCCCCHHHHH KCTWEEIKPQVDHVIFPDGKRIILLAKGRLVNLGCGTGHPSFVMSSSFANQTIAQIELFT HCCHHHCCCCCCEEECCCCCEEEEEECCCEEEEECCCCCCCCEEECHHHHHHHHHHEEEH KQADYEVGKVYVLPKHLDEKVARLHLKKVGAMLTELSDEQAAYIGVSKAGPYKANTYRY HHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCC >Mature Secondary Structure SAVLKPVSAAADHIIADLSLADWGRKELNIAQTEMPGLMAIREEFAKAQPLKGARITGS CCHHHHHHHHHHHHHEECCHHCCCCCCCCEEHHCCCHHHHHHHHHHHCCCCCCCEEEEE LHMTIQTGVLIETLQALGADVRWASCNIFSTQDHAAAAIAAKGTPVFAIKGETLADYWDY EEEEEECCHHHHHHHHHCCCCEEEEEEEECCCCCCEEEEEECCCEEEEEECCHHHHHHHH THRIFEFSGAKGTPEEGPNMILDDGGDATLLMHLGTKAEKDASLISKPTSEEEICLFNSI HHHHEEECCCCCCCCCCCCEEEECCCCEEEEEEECCCCCCCHHHHCCCCCCCCEEEHHHH KAKLAQDPTWYSRRLKNIIGVTEETTTGVLRLNEMSAKGTLALRAINVNDSVTKSKFDNL HHHHCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCEEEEEEEECCCCHHHHHHHHH YGCRESLVDAIKRATDVMVAGKVACVAGYGDVGKGSAQALRALSAQVWVTEIDPINALQA HHHHHHHHHHHHHHHHEEEECCEEEEECCCCCCCCHHHHHHHHHHEEEEEECCCHHHHHH AMEGYKVVTMEYAADKADIFVSATGNKNVITYEHMAKMKDQAIVCNIGHFDNEIDVASLE HHCCCEEEEEEECCCCCEEEEEECCCCCEEEHHHHHHCCCCEEEEEECCCCCCCCHHHHH KCTWEEIKPQVDHVIFPDGKRIILLAKGRLVNLGCGTGHPSFVMSSSFANQTIAQIELFT HCCHHHCCCCCCEEECCCCCEEEEEECCCEEEEECCCCCCCCEEECHHHHHHHHHHEEEH KQADYEVGKVYVLPKHLDEKVARLHLKKVGAMLTELSDEQAAYIGVSKAGPYKANTYRY HHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA