Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91789890

Identifier: 91789890

GI number: 91789890

Start: 4252751

End: 4253872

Strand: Direct

Name: 91789890

Synonym: Bpro_4051

Alternate gene names: NA

Gene position: 4252751-4253872 (Clockwise)

Preceding gene: 91789889

Following gene: 91789891

Centisome position: 81.78

GC content: 61.94

Gene sequence:

>1122_bases
ATGACCGATAGCAAGACCCCCCGCCGCCGCAGCCTGCTCAAGGGCGCAGCAATGGCCGCCGGTGCCGGCGCCATGTCCGC
CCCCATGCTGGCGACCGCGCAAACCACCACCACGCTGCGTTTCCAGAGCACCTGGCCCTCGAAGGACATCTTCCACGAAT
ACGCCAACGACTTTGCCAAGAAGGTCAACGACATGGCTGGCGGCAAGCTGAAAATCGAAGTGCTGCCCGCTGGCGCGGTG
GTGCCTGCATTCCAGCTGCTGGAAGCCGTCAACAAGGGCACGCTGGATGGCGGTCACGGCGTGGTGGCCTACCACTACGG
CAAAAACTCGGCGCTGGCGCTCTGGGGTTCCGGTCCCTCCTACGGCATGGACCCCAACATGCTGCTGGCCTGGCACAACT
ACGGCGGCGGCAAGGCCATCCTGGAAGAAATCTACAAGTCGCTCAACATGGACGTGGTGTCCTACCTGTACGGCCCGATG
CCGACGCAACCGCTGGGCTGGTTCAAGAAGCCGGTGACCAAGGTTGAAGACATGAAGGGCCTGAAGTTCCGCACCGTCGG
CCTGGCCGTCGACATCTTCACCGAGATGGGCACCGCCGTCAACCCGCTGCCGGGCGGCGAAATCGTGCCGGCGCTGGACC
GCGGGCTGATTGACGCGGCCGAGTTCAACAACGCCTCGAGCGACCGTCTGCTGGGCTTTCCCGACGTGGTGAAAAACTGC
ATGCTGCAGAGCTTCCACCAGAGCGGCGAGCAGTTCGAGATCCTGTTCAACAAGGGCAAGTACAACGCCTTGCCACAAGA
GCTGCGCTCCATCATCGACTACGCCGTCCAGGCAGCCAGCGCCGACATGAGCTGGAAGGCTGTGGAGCGCAATTCGCAGG
ACTACATCGAACTCAAGAAAGCCGGCGTCAAGTTCTACAAGACACCCGACGCGATCCTGCGCGCCCAGCTGGCCGCCTGG
GACAAAACCATCGACAAGAAAGCCAAGGAAAACGCGCTCTTCAAGAAGGTGCTCGACTCCCAGAAAGTCTTTGCGCAGCG
CGCGGGCCAGTGGCAGAACGACTACACCGTGGATTTCAAGATGGCCTATAACCACTACTTCGGCCGGGGCAAGAAAGCCT
GA

Upstream 100 bases:

>100_bases
AATCAAAGGCTTACTGTCGGTAAAAACCCTCTTCCGCGCAGCCCGTCAATCGCAAATGATCCTTAGGTAGGTAATGTTTT
TAACAACAGGAGACACGTTG

Downstream 100 bases:

>100_bases
TCGAGGCAGTGGCCTCGGAGGGGCACCTGAGGGTGCCCTTTGTTTTTTCGGGACCGCCATTCGGGCGGCGCAAGGAGTCG
CAATGCAATCGTTTTTACTG

Product: twin-arginine translocation pathway signal protein

Products: NA

Alternate protein names: Twin-Arginine Translocation Pathway Signal; TRAP Dicarboxylate Transporter Subunit DctP; Trap Dicarboxylate Transporter- Dctp Subunit; Transporter Periplasmic Component; Trap Dicarboxylate Transporter; TRAP Mannitol/C4-Dicarboxylate Transporter; TRAP Dicarboxylate Transporter-DctP Subunit; TRAP Dicarboxylate Transporter; TRAP-Type Mannitol/Chloroaromatic Compound Transport System; TRAP Dicarboxylate Family Transporter DctP Subunit; TRAP Dicarboxylate Transporter DctP Subunit; Trap-T Transport System Periplasmic Component; Periplasmic TRAP-Type Dicarboxylate Transporter Protein; C4-Dicarboxylate Transporter; TRAP Transporter; TRAP Dicarboxylate Transporter- Dctp Subunit; Trap Transporter Dctp Subunit Containing Protein

Number of amino acids: Translated: 373; Mature: 372

Protein sequence:

>373_residues
MTDSKTPRRRSLLKGAAMAAGAGAMSAPMLATAQTTTTLRFQSTWPSKDIFHEYANDFAKKVNDMAGGKLKIEVLPAGAV
VPAFQLLEAVNKGTLDGGHGVVAYHYGKNSALALWGSGPSYGMDPNMLLAWHNYGGGKAILEEIYKSLNMDVVSYLYGPM
PTQPLGWFKKPVTKVEDMKGLKFRTVGLAVDIFTEMGTAVNPLPGGEIVPALDRGLIDAAEFNNASSDRLLGFPDVVKNC
MLQSFHQSGEQFEILFNKGKYNALPQELRSIIDYAVQAASADMSWKAVERNSQDYIELKKAGVKFYKTPDAILRAQLAAW
DKTIDKKAKENALFKKVLDSQKVFAQRAGQWQNDYTVDFKMAYNHYFGRGKKA

Sequences:

>Translated_373_residues
MTDSKTPRRRSLLKGAAMAAGAGAMSAPMLATAQTTTTLRFQSTWPSKDIFHEYANDFAKKVNDMAGGKLKIEVLPAGAV
VPAFQLLEAVNKGTLDGGHGVVAYHYGKNSALALWGSGPSYGMDPNMLLAWHNYGGGKAILEEIYKSLNMDVVSYLYGPM
PTQPLGWFKKPVTKVEDMKGLKFRTVGLAVDIFTEMGTAVNPLPGGEIVPALDRGLIDAAEFNNASSDRLLGFPDVVKNC
MLQSFHQSGEQFEILFNKGKYNALPQELRSIIDYAVQAASADMSWKAVERNSQDYIELKKAGVKFYKTPDAILRAQLAAW
DKTIDKKAKENALFKKVLDSQKVFAQRAGQWQNDYTVDFKMAYNHYFGRGKKA
>Mature_372_residues
TDSKTPRRRSLLKGAAMAAGAGAMSAPMLATAQTTTTLRFQSTWPSKDIFHEYANDFAKKVNDMAGGKLKIEVLPAGAVV
PAFQLLEAVNKGTLDGGHGVVAYHYGKNSALALWGSGPSYGMDPNMLLAWHNYGGGKAILEEIYKSLNMDVVSYLYGPMP
TQPLGWFKKPVTKVEDMKGLKFRTVGLAVDIFTEMGTAVNPLPGGEIVPALDRGLIDAAEFNNASSDRLLGFPDVVKNCM
LQSFHQSGEQFEILFNKGKYNALPQELRSIIDYAVQAASADMSWKAVERNSQDYIELKKAGVKFYKTPDAILRAQLAAWD
KTIDKKAKENALFKKVLDSQKVFAQRAGQWQNDYTVDFKMAYNHYFGRGKKA

Specific function: Unknown

COG id: COG4663

COG function: function code Q; TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41060; Mature: 40928

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDSKTPRRRSLLKGAAMAAGAGAMSAPMLATAQTTTTLRFQSTWPSKDIFHEYANDFAK
CCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEECCEEEEEEECCCCCHHHHHHHHHHHHH
KVNDMAGGKLKIEVLPAGAVVPAFQLLEAVNKGTLDGGHGVVAYHYGKNSALALWGSGPS
HHHHHCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEEEECCCC
YGMDPNMLLAWHNYGGGKAILEEIYKSLNMDVVSYLYGPMPTQPLGWFKKPVTKVEDMKG
CCCCCCEEEEEECCCCHHHHHHHHHHHHCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCC
LKFRTVGLAVDIFTEMGTAVNPLPGGEIVPALDRGLIDAAEFNNASSDRLLGFPDVVKNC
CEEEEHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCHHHCCCCCCCCCCCCHHHHHHH
MLQSFHQSGEQFEILFNKGKYNALPQELRSIIDYAVQAASADMSWKAVERNSQDYIELKK
HHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHH
AGVKFYKTPDAILRAQLAAWDKTIDKKAKENALFKKVLDSQKVFAQRAGQWQNDYTVDFK
CCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE
MAYNHYFGRGKKA
EEEHHHCCCCCCC
>Mature Secondary Structure 
TDSKTPRRRSLLKGAAMAAGAGAMSAPMLATAQTTTTLRFQSTWPSKDIFHEYANDFAK
CCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEECCEEEEEEECCCCCHHHHHHHHHHHHH
KVNDMAGGKLKIEVLPAGAVVPAFQLLEAVNKGTLDGGHGVVAYHYGKNSALALWGSGPS
HHHHHCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEEEECCCC
YGMDPNMLLAWHNYGGGKAILEEIYKSLNMDVVSYLYGPMPTQPLGWFKKPVTKVEDMKG
CCCCCCEEEEEECCCCHHHHHHHHHHHHCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCC
LKFRTVGLAVDIFTEMGTAVNPLPGGEIVPALDRGLIDAAEFNNASSDRLLGFPDVVKNC
CEEEEHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCHHHCCCCCCCCCCCCHHHHHHH
MLQSFHQSGEQFEILFNKGKYNALPQELRSIIDYAVQAASADMSWKAVERNSQDYIELKK
HHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHH
AGVKFYKTPDAILRAQLAAWDKTIDKKAKENALFKKVLDSQKVFAQRAGQWQNDYTVDFK
CCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE
MAYNHYFGRGKKA
EEEHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA