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The map label for this gene is cmpR [H]

Identifier: 91789875

GI number: 91789875

Start: 4236183

End: 4237124

Strand: Direct

Name: cmpR [H]

Synonym: Bpro_4035

Alternate gene names: 91789875

Gene position: 4236183-4237124 (Clockwise)

Preceding gene: 91789874

Following gene: 91789876

Centisome position: 81.46

GC content: 67.83

Gene sequence:

>942_bases
TTGGCCACCGCCACCTACAACCTGGCCAGGTTTGACCTGGTGTCCATCCGCCTGGCGGTCGCCTGCGCCCAGAGCGGCAG
CCTGACCGCTGCGGCGCGCGATTCACACCTGGCACTGGCTGCCGCGAGCCGGCGCCTGCGCGAACTCGAAGATGCGCTGG
GTGACCCCCTGTTCGAACGCCACGCGCGCGGCCTGCTGCCCACCGCGGCCGGCCGCGTCTTTGTCAAGCACGGCCTGACG
CTGCTGCAGACCATGGAGCAGCTCGGCGCCGAACTGGCCGACCTGCGGCGCGGCATTGCGCGCCACATCCGCCTGTGCGC
CAGCAGCGCCGCCATCAGCCAGTTCCTGCCGCCGCTGCTGGCCCGCTATGGCCAGCTGCATCCGCAGATGCACGTCGACC
TGGAAGAGCAGGTGTCGGAAGCGGTGGTGTCTACCCTGCGCGAGGGCCGCGCCGATGTGGCGGTGTTCGTCGAAGGGCCG
GACACGGCCGGGCTGGACACCCACCTTTTCCGCGAGGACGAGCTGGTGCTGGTGCTGCCCGGCAAGCACCCACTGGCGAG
CTCGAAAACAGCCATAGCCTTTGCCGACACGCTGGACGAGGAATGGATCAGCCTGACCGCCGGCGCCGCCATGCTGCAAA
AGCAGCAGCAGGCGGCCCTGGCCGCCAACCGGCCGCTCAAGCTGCGCATGCAGGTGCGCAGTTTTGACGCGGTGTGCCAC
ATGGTGGCTTCTGGCCTGGGCATTGCGATATTGCCCAAGGGGGCCAGCCTGCCCATCGTCAAGGCCATGAAGCTGAGCTG
GCGGCCGCTGGCAGACAGCTGGGCACAACGCCGATTGCTGGTCGCCACCGGCGGCAATGAAAGCGATGCAGCCACTGCTT
CGCTGGTGAACTTCCTGGTTCAGCCTTCGCAAAATGCGAAGGCCGCGCGCCACAAACAGTAA

Upstream 100 bases:

>100_bases
GCACAAAGCTGGCGAGCACAAGACGGCCGCCAAAAAACCTGTGGCAAAAATGACTTCCCCGCCGAAAGCCCCGGGCAGGA
AAGCCTGAGCCGGCAGCACC

Downstream 100 bases:

>100_bases
TGGACGCGAAGGGGCCGCAACCGCACACTACGCGGCCATGGACACCACTACATCTGTCAATCGCGGCCCGCTGGCTGGCC
TCAAGGTTCTTGAACTCGGG

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 312

Protein sequence:

>313_residues
MATATYNLARFDLVSIRLAVACAQSGSLTAAARDSHLALAAASRRLRELEDALGDPLFERHARGLLPTAAGRVFVKHGLT
LLQTMEQLGAELADLRRGIARHIRLCASSAAISQFLPPLLARYGQLHPQMHVDLEEQVSEAVVSTLREGRADVAVFVEGP
DTAGLDTHLFREDELVLVLPGKHPLASSKTAIAFADTLDEEWISLTAGAAMLQKQQQAALAANRPLKLRMQVRSFDAVCH
MVASGLGIAILPKGASLPIVKAMKLSWRPLADSWAQRRLLVATGGNESDAATASLVNFLVQPSQNAKAARHKQ

Sequences:

>Translated_313_residues
MATATYNLARFDLVSIRLAVACAQSGSLTAAARDSHLALAAASRRLRELEDALGDPLFERHARGLLPTAAGRVFVKHGLT
LLQTMEQLGAELADLRRGIARHIRLCASSAAISQFLPPLLARYGQLHPQMHVDLEEQVSEAVVSTLREGRADVAVFVEGP
DTAGLDTHLFREDELVLVLPGKHPLASSKTAIAFADTLDEEWISLTAGAAMLQKQQQAALAANRPLKLRMQVRSFDAVCH
MVASGLGIAILPKGASLPIVKAMKLSWRPLADSWAQRRLLVATGGNESDAATASLVNFLVQPSQNAKAARHKQ
>Mature_312_residues
ATATYNLARFDLVSIRLAVACAQSGSLTAAARDSHLALAAASRRLRELEDALGDPLFERHARGLLPTAAGRVFVKHGLTL
LQTMEQLGAELADLRRGIARHIRLCASSAAISQFLPPLLARYGQLHPQMHVDLEEQVSEAVVSTLREGRADVAVFVEGPD
TAGLDTHLFREDELVLVLPGKHPLASSKTAIAFADTLDEEWISLTAGAAMLQKQQQAALAANRPLKLRMQVRSFDAVCHM
VASGLGIAILPKGASLPIVKAMKLSWRPLADSWAQRRLLVATGGNESDAATASLVNFLVQPSQNAKAARHKQ

Specific function: Activates transcription of the cmpABCD operon under carbon dioxide-limited conditions [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI145693105, Length=253, Percent_Identity=24.5059288537549, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI157672245, Length=233, Percent_Identity=28.3261802575107, Blast_Score=78, Evalue=7e-16,
Organism=Escherichia coli, GI1788481, Length=259, Percent_Identity=27.4131274131274, Blast_Score=78, Evalue=8e-16,
Organism=Escherichia coli, GI1787601, Length=243, Percent_Identity=23.8683127572016, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1788887, Length=187, Percent_Identity=29.9465240641711, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI1789204, Length=251, Percent_Identity=31.8725099601594, Blast_Score=69, Evalue=6e-13,
Organism=Escherichia coli, GI1788297, Length=246, Percent_Identity=25.2032520325203, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI2367136, Length=249, Percent_Identity=24.8995983935743, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1790399, Length=273, Percent_Identity=23.8095238095238, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1787879, Length=266, Percent_Identity=23.3082706766917, Blast_Score=62, Evalue=4e-11,
Organism=Escherichia coli, GI1787806, Length=265, Percent_Identity=23.0188679245283, Blast_Score=61, Evalue=8e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 33648; Mature: 33517

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATATYNLARFDLVSIRLAVACAQSGSLTAAARDSHLALAAASRRLRELEDALGDPLFER
CCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHH
HARGLLPTAAGRVFVKHGLTLLQTMEQLGAELADLRRGIARHIRLCASSAAISQFLPPLL
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARYGQLHPQMHVDLEEQVSEAVVSTLREGRADVAVFVEGPDTAGLDTHLFREDELVLVLP
HHHHCCCCCEECCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHEECCCCEEEEEC
GKHPLASSKTAIAFADTLDEEWISLTAGAAMLQKQQQAALAANRPLKLRMQVRSFDAVCH
CCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHH
MVASGLGIAILPKGASLPIVKAMKLSWRPLADSWAQRRLLVATGGNESDAATASLVNFLV
HHHCCCCEEEECCCCCCCHHHHHHCCCCCHHHHHHHCEEEEEECCCCCHHHHHHHHHHHH
QPSQNAKAARHKQ
CCCCCCCHHCCCC
>Mature Secondary Structure 
ATATYNLARFDLVSIRLAVACAQSGSLTAAARDSHLALAAASRRLRELEDALGDPLFER
CCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHH
HARGLLPTAAGRVFVKHGLTLLQTMEQLGAELADLRRGIARHIRLCASSAAISQFLPPLL
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARYGQLHPQMHVDLEEQVSEAVVSTLREGRADVAVFVEGPDTAGLDTHLFREDELVLVLP
HHHHCCCCCEECCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHEECCCCEEEEEC
GKHPLASSKTAIAFADTLDEEWISLTAGAAMLQKQQQAALAANRPLKLRMQVRSFDAVCH
CCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHH
MVASGLGIAILPKGASLPIVKAMKLSWRPLADSWAQRRLLVATGGNESDAATASLVNFLV
HHHCCCCEEEECCCCCCCHHHHHHCCCCCHHHHHHHCEEEEEECCCCCHHHHHHHHHHHH
QPSQNAKAARHKQ
CCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA