Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is pimA [H]

Identifier: 91789856

GI number: 91789856

Start: 4215673

End: 4216809

Strand: Reverse

Name: pimA [H]

Synonym: Bpro_4016

Alternate gene names: 91789856

Gene position: 4216809-4215673 (Counterclockwise)

Preceding gene: 91789857

Following gene: 91789838

Centisome position: 81.09

GC content: 60.07

Gene sequence:

>1137_bases
ATGAGAGTGCTTCAGTTTGGGCGCTTCTGGCACGACCAGCATGGCGGTATTGAGCGCCATGTGGCTTTGCTCAGCAAGGA
GTTGGCGACTCTTGGCGTTGAGGTCGTGAACCTCGTGGCCGCGCAAAACCTGCAGGGCAGCGACGTCACCGTAGACGGCT
ATCGACTGGTCCAGGTGCCGTCGCTTGGCATGGTATTCAGCACGGCCCTTGCCCCCGGGCTGGTGTTCAAGGCGCTGGCC
CTGCATCGCGAGAAAAAATTTGATGTGCTGCATCTGCATTTGCCCGACCCGCTTTCGCACTTAGCCTCTCTGGCATTGCC
TTCCAGCATCAAGCGGGTGATCACCTGGCACAGCGACATCATTCGCCAAAAAAAACTGCTGGCGTTGTATGAACCTTTTT
TACGGCACATCACACGGCAGGCCGACGCATTGGTTGCAGCCACGCAGGCCCACTTTGATGCATCTACCCAGATCCCGCAC
GACATCCCTGCGCAGCGCCGTCATGTCATTCCTTATGGGCTTGACTACGCACCGCTGGTGCTGAACCCGCGAACTGCCGT
GCTGCGCGATGAGTTGCGCGCGCGGGCACAGGGCAAGGGGCTGGTCTTTGCGCTGGGCCGCCATGTTTATTACAAAGGTT
TTGATGTGTTGATAGAGGCCCTGCAGCACACCGATGCCTTTCTTGTCCTGGGGGGGGACGGGCCATTGCGGCCTCAGCTG
GAGCAGCAGGCGGCAGCACTGGGTGTAAGCAACAGGGTGCATTTCAGTGGCCGTATCCCCGAAGAAGATCTGGCCGCTTA
CTTCAATGCCTGCGACGTGTTCTGCTTGCCCTCGGTGGAACCCTCAGAAGCGTTTGGCCTGGTACAGCTTGAGGCCATGG
CCTGCGGCAAGCCCGTGGTGTGTACCCAGCTGAACAATGGCGTCAACGTGGTCAACGTGGATGGCCAAACCGGCTTTGCC
GTTCCGGTGCGCGACCCGCTGGCCCTGGGCCATTGCCTTGCCCGTTTGCTGAAGGACGACGCCTTGCGCGAGAAGCTGGG
CCAGCAAGCCCTGGCCCATACCGACAACTACTCGGTGCCTACCATGGCGGCGAGCCACTTCAGGCTGTATCAGGACTTGT
TGAGCACCAGCCGGTAG

Upstream 100 bases:

>100_bases
GCCCCTGCCCCTGAACACGCCCCCACTTCTTTCAAGCAAAGACCAGATGGGACTAACGATGCATGACGCTGAACTGTTTT
TATAAGATGTTTTCAATTCA

Downstream 100 bases:

>100_bases
GCCTCTACAGTCTGGCTAACGCAGCTTGCCCATGTGAACTGAGTGCTGCGCGCAAGCGCCTTCCGGGCCATGGCGTCGCG
GACGTCAGGCGCGGCGAGCA

Product: group 1 glycosyl transferase

Products: NA

Alternate protein names: Alpha-mannosyltransferase; Guanosine diphosphomannose-phosphatidyl-inositol alpha-mannosyltransferase; Phosphatidylinositol alpha-mannosyltransferase; PI alpha-mannosyltransferase [H]

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MRVLQFGRFWHDQHGGIERHVALLSKELATLGVEVVNLVAAQNLQGSDVTVDGYRLVQVPSLGMVFSTALAPGLVFKALA
LHREKKFDVLHLHLPDPLSHLASLALPSSIKRVITWHSDIIRQKKLLALYEPFLRHITRQADALVAATQAHFDASTQIPH
DIPAQRRHVIPYGLDYAPLVLNPRTAVLRDELRARAQGKGLVFALGRHVYYKGFDVLIEALQHTDAFLVLGGDGPLRPQL
EQQAAALGVSNRVHFSGRIPEEDLAAYFNACDVFCLPSVEPSEAFGLVQLEAMACGKPVVCTQLNNGVNVVNVDGQTGFA
VPVRDPLALGHCLARLLKDDALREKLGQQALAHTDNYSVPTMAASHFRLYQDLLSTSR

Sequences:

>Translated_378_residues
MRVLQFGRFWHDQHGGIERHVALLSKELATLGVEVVNLVAAQNLQGSDVTVDGYRLVQVPSLGMVFSTALAPGLVFKALA
LHREKKFDVLHLHLPDPLSHLASLALPSSIKRVITWHSDIIRQKKLLALYEPFLRHITRQADALVAATQAHFDASTQIPH
DIPAQRRHVIPYGLDYAPLVLNPRTAVLRDELRARAQGKGLVFALGRHVYYKGFDVLIEALQHTDAFLVLGGDGPLRPQL
EQQAAALGVSNRVHFSGRIPEEDLAAYFNACDVFCLPSVEPSEAFGLVQLEAMACGKPVVCTQLNNGVNVVNVDGQTGFA
VPVRDPLALGHCLARLLKDDALREKLGQQALAHTDNYSVPTMAASHFRLYQDLLSTSR
>Mature_378_residues
MRVLQFGRFWHDQHGGIERHVALLSKELATLGVEVVNLVAAQNLQGSDVTVDGYRLVQVPSLGMVFSTALAPGLVFKALA
LHREKKFDVLHLHLPDPLSHLASLALPSSIKRVITWHSDIIRQKKLLALYEPFLRHITRQADALVAATQAHFDASTQIPH
DIPAQRRHVIPYGLDYAPLVLNPRTAVLRDELRARAQGKGLVFALGRHVYYKGFDVLIEALQHTDAFLVLGGDGPLRPQL
EQQAAALGVSNRVHFSGRIPEEDLAAYFNACDVFCLPSVEPSEAFGLVQLEAMACGKPVVCTQLNNGVNVVNVDGQTGFA
VPVRDPLALGHCLARLLKDDALREKLGQQALAHTDNYSVPTMAASHFRLYQDLLSTSR

Specific function: Catalyzes the addition of a mannose residue from GDP-D- mannose to the position 2 of a phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Contrary to pimB, the mannosyltransferase pim

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: =2.4.1.57 [H]

Molecular weight: Translated: 41555; Mature: 41555

Theoretical pI: Translated: 7.76; Mature: 7.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVLQFGRFWHDQHGGIERHVALLSKELATLGVEVVNLVAAQNLQGSDVTVDGYRLVQVP
CCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCEEEEEEC
SLGMVFSTALAPGLVFKALALHREKKFDVLHLHLPDPLSHLASLALPSSIKRVITWHSDI
CCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCHHHHHHHHHHHHHH
IRQKKLLALYEPFLRHITRQADALVAATQAHFDASTQIPHDIPAQRRHVIPYGLDYAPLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCCEE
LNPRTAVLRDELRARAQGKGLVFALGRHVYYKGFDVLIEALQHTDAFLVLGGDGPLRPQL
ECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHH
EQQAAALGVSNRVHFSGRIPEEDLAAYFNACDVFCLPSVEPSEAFGLVQLEAMACGKPVV
HHHHHHHCCCCEEEECCCCCHHHHHHHHCCCCEEEECCCCCCHHCCEEEEEHHHCCCCEE
CTQLNNGVNVVNVDGQTGFAVPVRDPLALGHCLARLLKDDALREKLGQQALAHTDNYSVP
EEEECCCCEEEEECCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
TMAASHFRLYQDLLSTSR
HHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRVLQFGRFWHDQHGGIERHVALLSKELATLGVEVVNLVAAQNLQGSDVTVDGYRLVQVP
CCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCEEEEEEC
SLGMVFSTALAPGLVFKALALHREKKFDVLHLHLPDPLSHLASLALPSSIKRVITWHSDI
CCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCHHHHHHHHHHHHHH
IRQKKLLALYEPFLRHITRQADALVAATQAHFDASTQIPHDIPAQRRHVIPYGLDYAPLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCCEE
LNPRTAVLRDELRARAQGKGLVFALGRHVYYKGFDVLIEALQHTDAFLVLGGDGPLRPQL
ECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHH
EQQAAALGVSNRVHFSGRIPEEDLAAYFNACDVFCLPSVEPSEAFGLVQLEAMACGKPVV
HHHHHHHCCCCEEEECCCCCHHHHHHHHCCCCEEEECCCCCCHHCCEEEEEHHHCCCCEE
CTQLNNGVNVVNVDGQTGFAVPVRDPLALGHCLARLLKDDALREKLGQQALAHTDNYSVP
EEEECCCCEEEEECCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
TMAASHFRLYQDLLSTSR
HHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12068013 [H]