| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is pimA [H]
Identifier: 91789856
GI number: 91789856
Start: 4215673
End: 4216809
Strand: Reverse
Name: pimA [H]
Synonym: Bpro_4016
Alternate gene names: 91789856
Gene position: 4216809-4215673 (Counterclockwise)
Preceding gene: 91789857
Following gene: 91789838
Centisome position: 81.09
GC content: 60.07
Gene sequence:
>1137_bases ATGAGAGTGCTTCAGTTTGGGCGCTTCTGGCACGACCAGCATGGCGGTATTGAGCGCCATGTGGCTTTGCTCAGCAAGGA GTTGGCGACTCTTGGCGTTGAGGTCGTGAACCTCGTGGCCGCGCAAAACCTGCAGGGCAGCGACGTCACCGTAGACGGCT ATCGACTGGTCCAGGTGCCGTCGCTTGGCATGGTATTCAGCACGGCCCTTGCCCCCGGGCTGGTGTTCAAGGCGCTGGCC CTGCATCGCGAGAAAAAATTTGATGTGCTGCATCTGCATTTGCCCGACCCGCTTTCGCACTTAGCCTCTCTGGCATTGCC TTCCAGCATCAAGCGGGTGATCACCTGGCACAGCGACATCATTCGCCAAAAAAAACTGCTGGCGTTGTATGAACCTTTTT TACGGCACATCACACGGCAGGCCGACGCATTGGTTGCAGCCACGCAGGCCCACTTTGATGCATCTACCCAGATCCCGCAC GACATCCCTGCGCAGCGCCGTCATGTCATTCCTTATGGGCTTGACTACGCACCGCTGGTGCTGAACCCGCGAACTGCCGT GCTGCGCGATGAGTTGCGCGCGCGGGCACAGGGCAAGGGGCTGGTCTTTGCGCTGGGCCGCCATGTTTATTACAAAGGTT TTGATGTGTTGATAGAGGCCCTGCAGCACACCGATGCCTTTCTTGTCCTGGGGGGGGACGGGCCATTGCGGCCTCAGCTG GAGCAGCAGGCGGCAGCACTGGGTGTAAGCAACAGGGTGCATTTCAGTGGCCGTATCCCCGAAGAAGATCTGGCCGCTTA CTTCAATGCCTGCGACGTGTTCTGCTTGCCCTCGGTGGAACCCTCAGAAGCGTTTGGCCTGGTACAGCTTGAGGCCATGG CCTGCGGCAAGCCCGTGGTGTGTACCCAGCTGAACAATGGCGTCAACGTGGTCAACGTGGATGGCCAAACCGGCTTTGCC GTTCCGGTGCGCGACCCGCTGGCCCTGGGCCATTGCCTTGCCCGTTTGCTGAAGGACGACGCCTTGCGCGAGAAGCTGGG CCAGCAAGCCCTGGCCCATACCGACAACTACTCGGTGCCTACCATGGCGGCGAGCCACTTCAGGCTGTATCAGGACTTGT TGAGCACCAGCCGGTAG
Upstream 100 bases:
>100_bases GCCCCTGCCCCTGAACACGCCCCCACTTCTTTCAAGCAAAGACCAGATGGGACTAACGATGCATGACGCTGAACTGTTTT TATAAGATGTTTTCAATTCA
Downstream 100 bases:
>100_bases GCCTCTACAGTCTGGCTAACGCAGCTTGCCCATGTGAACTGAGTGCTGCGCGCAAGCGCCTTCCGGGCCATGGCGTCGCG GACGTCAGGCGCGGCGAGCA
Product: group 1 glycosyl transferase
Products: NA
Alternate protein names: Alpha-mannosyltransferase; Guanosine diphosphomannose-phosphatidyl-inositol alpha-mannosyltransferase; Phosphatidylinositol alpha-mannosyltransferase; PI alpha-mannosyltransferase [H]
Number of amino acids: Translated: 378; Mature: 378
Protein sequence:
>378_residues MRVLQFGRFWHDQHGGIERHVALLSKELATLGVEVVNLVAAQNLQGSDVTVDGYRLVQVPSLGMVFSTALAPGLVFKALA LHREKKFDVLHLHLPDPLSHLASLALPSSIKRVITWHSDIIRQKKLLALYEPFLRHITRQADALVAATQAHFDASTQIPH DIPAQRRHVIPYGLDYAPLVLNPRTAVLRDELRARAQGKGLVFALGRHVYYKGFDVLIEALQHTDAFLVLGGDGPLRPQL EQQAAALGVSNRVHFSGRIPEEDLAAYFNACDVFCLPSVEPSEAFGLVQLEAMACGKPVVCTQLNNGVNVVNVDGQTGFA VPVRDPLALGHCLARLLKDDALREKLGQQALAHTDNYSVPTMAASHFRLYQDLLSTSR
Sequences:
>Translated_378_residues MRVLQFGRFWHDQHGGIERHVALLSKELATLGVEVVNLVAAQNLQGSDVTVDGYRLVQVPSLGMVFSTALAPGLVFKALA LHREKKFDVLHLHLPDPLSHLASLALPSSIKRVITWHSDIIRQKKLLALYEPFLRHITRQADALVAATQAHFDASTQIPH DIPAQRRHVIPYGLDYAPLVLNPRTAVLRDELRARAQGKGLVFALGRHVYYKGFDVLIEALQHTDAFLVLGGDGPLRPQL EQQAAALGVSNRVHFSGRIPEEDLAAYFNACDVFCLPSVEPSEAFGLVQLEAMACGKPVVCTQLNNGVNVVNVDGQTGFA VPVRDPLALGHCLARLLKDDALREKLGQQALAHTDNYSVPTMAASHFRLYQDLLSTSR >Mature_378_residues MRVLQFGRFWHDQHGGIERHVALLSKELATLGVEVVNLVAAQNLQGSDVTVDGYRLVQVPSLGMVFSTALAPGLVFKALA LHREKKFDVLHLHLPDPLSHLASLALPSSIKRVITWHSDIIRQKKLLALYEPFLRHITRQADALVAATQAHFDASTQIPH DIPAQRRHVIPYGLDYAPLVLNPRTAVLRDELRARAQGKGLVFALGRHVYYKGFDVLIEALQHTDAFLVLGGDGPLRPQL EQQAAALGVSNRVHFSGRIPEEDLAAYFNACDVFCLPSVEPSEAFGLVQLEAMACGKPVVCTQLNNGVNVVNVDGQTGFA VPVRDPLALGHCLARLLKDDALREKLGQQALAHTDNYSVPTMAASHFRLYQDLLSTSR
Specific function: Catalyzes the addition of a mannose residue from GDP-D- mannose to the position 2 of a phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Contrary to pimB, the mannosyltransferase pim
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: =2.4.1.57 [H]
Molecular weight: Translated: 41555; Mature: 41555
Theoretical pI: Translated: 7.76; Mature: 7.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVLQFGRFWHDQHGGIERHVALLSKELATLGVEVVNLVAAQNLQGSDVTVDGYRLVQVP CCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCEEEEEEC SLGMVFSTALAPGLVFKALALHREKKFDVLHLHLPDPLSHLASLALPSSIKRVITWHSDI CCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCHHHHHHHHHHHHHH IRQKKLLALYEPFLRHITRQADALVAATQAHFDASTQIPHDIPAQRRHVIPYGLDYAPLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCCEE LNPRTAVLRDELRARAQGKGLVFALGRHVYYKGFDVLIEALQHTDAFLVLGGDGPLRPQL ECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHH EQQAAALGVSNRVHFSGRIPEEDLAAYFNACDVFCLPSVEPSEAFGLVQLEAMACGKPVV HHHHHHHCCCCEEEECCCCCHHHHHHHHCCCCEEEECCCCCCHHCCEEEEEHHHCCCCEE CTQLNNGVNVVNVDGQTGFAVPVRDPLALGHCLARLLKDDALREKLGQQALAHTDNYSVP EEEECCCCEEEEECCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC TMAASHFRLYQDLLSTSR HHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRVLQFGRFWHDQHGGIERHVALLSKELATLGVEVVNLVAAQNLQGSDVTVDGYRLVQVP CCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCEEEEEEC SLGMVFSTALAPGLVFKALALHREKKFDVLHLHLPDPLSHLASLALPSSIKRVITWHSDI CCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCHHHHHHHHHHHHHH IRQKKLLALYEPFLRHITRQADALVAATQAHFDASTQIPHDIPAQRRHVIPYGLDYAPLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCCEE LNPRTAVLRDELRARAQGKGLVFALGRHVYYKGFDVLIEALQHTDAFLVLGGDGPLRPQL ECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHH EQQAAALGVSNRVHFSGRIPEEDLAAYFNACDVFCLPSVEPSEAFGLVQLEAMACGKPVV HHHHHHHCCCCEEEECCCCCHHHHHHHHCCCCEEEECCCCCCHHCCEEEEEHHHCCCCEE CTQLNNGVNVVNVDGQTGFAVPVRDPLALGHCLARLLKDDALREKLGQQALAHTDNYSVP EEEECCCCEEEEECCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC TMAASHFRLYQDLLSTSR HHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12068013 [H]