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The map label for this gene is rfbG [H]

Identifier: 91789850

GI number: 91789850

Start: 4208999

End: 4210075

Strand: Direct

Name: rfbG [H]

Synonym: Bpro_4010

Alternate gene names: 91789850

Gene position: 4208999-4210075 (Clockwise)

Preceding gene: 91789849

Following gene: 91789851

Centisome position: 80.94

GC content: 57.57

Gene sequence:

>1077_bases
ATGAACCCAGCCTTCTGGCACGGCAGACGCGTCTTTCTCACTGGGCACACCGGCTTCAAGGGCAGCTGGATGTCCCTGTG
GCTTCAATCTCTAGGTGCGAACCTCACAGGTTATGCTCTTCAATCACCAACCCAGCCCAGCCTGTTTGATGAGGCTAAGG
TGGGACTAGGCATGCGCTCCATCATTGGCGACATTCGTGACTTGGCATTCCTGCAAAAGGCTATGCAGGAATGCCAGCCC
GAAATCGTCATCCACATGGCGGCACAACCGTTGGTACGATATTCCTACGCAAATCCGGTGGAAACCTATTCCACCAACGT
AATGGGCACCGTGCATCTCCTCGAGACCGTACGTCATGCTCCCAGCGTCAAGGCCGTGGTCAATATCACCACTGACAAAT
GCTACGAAAACCGCGAATGGGCTTGGGGCTATCGTGAAAACGAGCCAATGGGCGGCTACGACCCCTACAGCAACAGCAAG
GGTTGTGCTGAACTGGTCAGCTCTGCTTACCGGTCTTCCTTCTTCAACGCGAACAGCCATGCACAACACGGCGTTGGCCT
GGCTACCGTCCGAGCCGGCAACGTCATCGGCGGGGGCGATTGGGCGCAGGATAGATTAATTCCCGACATCCTCGCTGCTT
TCGAACAAGGCCAGCGCGTCAACATCCGCAACCCCCACTCCATCCGCCCTTGGCAACATGTGTTGGAGCCCTTGCGCGGC
TACCTCACGCTGGCCGAACGCCTTTTTGAGCACGGCCCCAGCTATGCCGAGGGCTGGAACTTTGGACCCAACGATGAAGA
TGCCAAACCGGTTGGCTGGATCGTCGAGCAAATGGCTGCGATGTGGGGCGAGGGTGCACAGTCGCAAATCGACAACGGCG
AGCATCCGCACGAGGCGAACTACCTCAAGCTCGATATATCCAAAGCCCGCAGCCGCCTGGACTGGCACCCCACGCTGCGC
CTGAACGATGCCTTGGCACTCATCATCGAATGGTCCAAGCAGCGCCAGGCGGGTGCTGACATCCGCGAGCTGACCTTGGC
CCAGATACACTCTTATCAAACATTGACCGAAAACTGA

Upstream 100 bases:

>100_bases
TCCAGCACGACGGTTTCTGGCAACCCATGGACACTCTGCGGGACAAAATTCACTTGGAAGACTTGTGGTCTAGCGGCAAG
GCGCCGTGGAAGGTGTGGAA

Downstream 100 bases:

>100_bases
TCAACACGATGCAAAACGCTAAAAGCCAAGACCTCCGCGACCAGATCGCCAAACTCGTCGATGAGTATGCCGCCATTGCT
TTGGCGCCGCAGCCTTTCCT

Product: NAD-dependent epimerase/dehydratase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 358; Mature: 358

Protein sequence:

>358_residues
MNPAFWHGRRVFLTGHTGFKGSWMSLWLQSLGANLTGYALQSPTQPSLFDEAKVGLGMRSIIGDIRDLAFLQKAMQECQP
EIVIHMAAQPLVRYSYANPVETYSTNVMGTVHLLETVRHAPSVKAVVNITTDKCYENREWAWGYRENEPMGGYDPYSNSK
GCAELVSSAYRSSFFNANSHAQHGVGLATVRAGNVIGGGDWAQDRLIPDILAAFEQGQRVNIRNPHSIRPWQHVLEPLRG
YLTLAERLFEHGPSYAEGWNFGPNDEDAKPVGWIVEQMAAMWGEGAQSQIDNGEHPHEANYLKLDISKARSRLDWHPTLR
LNDALALIIEWSKQRQAGADIRELTLAQIHSYQTLTEN

Sequences:

>Translated_358_residues
MNPAFWHGRRVFLTGHTGFKGSWMSLWLQSLGANLTGYALQSPTQPSLFDEAKVGLGMRSIIGDIRDLAFLQKAMQECQP
EIVIHMAAQPLVRYSYANPVETYSTNVMGTVHLLETVRHAPSVKAVVNITTDKCYENREWAWGYRENEPMGGYDPYSNSK
GCAELVSSAYRSSFFNANSHAQHGVGLATVRAGNVIGGGDWAQDRLIPDILAAFEQGQRVNIRNPHSIRPWQHVLEPLRG
YLTLAERLFEHGPSYAEGWNFGPNDEDAKPVGWIVEQMAAMWGEGAQSQIDNGEHPHEANYLKLDISKARSRLDWHPTLR
LNDALALIIEWSKQRQAGADIRELTLAQIHSYQTLTEN
>Mature_358_residues
MNPAFWHGRRVFLTGHTGFKGSWMSLWLQSLGANLTGYALQSPTQPSLFDEAKVGLGMRSIIGDIRDLAFLQKAMQECQP
EIVIHMAAQPLVRYSYANPVETYSTNVMGTVHLLETVRHAPSVKAVVNITTDKCYENREWAWGYRENEPMGGYDPYSNSK
GCAELVSSAYRSSFFNANSHAQHGVGLATVRAGNVIGGGDWAQDRLIPDILAAFEQGQRVNIRNPHSIRPWQHVLEPLRG
YLTLAERLFEHGPSYAEGWNFGPNDEDAKPVGWIVEQMAAMWGEGAQSQIDNGEHPHEANYLKLDISKARSRLDWHPTLR
LNDALALIIEWSKQRQAGADIRELTLAQIHSYQTLTEN

Specific function: INVOLVED IN THE SYNTHESIS OF ENTEROBACTERIAL COMMON ANTIGEN (ECA) AND REQUIRED FOR SYNTHESIS OF LIPOPOLYSACCHARIDE O-SIDE CHAINS. [C]

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI115532424, Length=337, Percent_Identity=23.1454005934718, Blast_Score=71, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013445
- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: =4.2.1.45 [H]

Molecular weight: Translated: 40155; Mature: 40155

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPAFWHGRRVFLTGHTGFKGSWMSLWLQSLGANLTGYALQSPTQPSLFDEAKVGLGMRS
CCCCEECCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHCCCHHH
IIGDIRDLAFLQKAMQECQPEIVIHMAAQPLVRYSYANPVETYSTNVMGTVHLLETVRHA
HHHHHHHHHHHHHHHHHCCHHEEEEHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHC
PSVKAVVNITTDKCYENREWAWGYRENEPMGGYDPYSNSKGCAELVSSAYRSSFFNANSH
CCCEEEEEEEHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
AQHGVGLATVRAGNVIGGGDWAQDRLIPDILAAFEQGQRVNIRNPHSIRPWQHVLEPLRG
CCCCCCEEEEECCCEECCCCCHHHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHHHH
YLTLAERLFEHGPSYAEGWNFGPNDEDAKPVGWIVEQMAAMWGEGAQSQIDNGEHPHEAN
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCC
YLKLDISKARSRLDWHPTLRLNDALALIIEWSKQRQAGADIRELTLAQIHSYQTLTEN
EEEEEHHHHHHCCCCCCCEEECCCEEEEEEHHHHHHCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNPAFWHGRRVFLTGHTGFKGSWMSLWLQSLGANLTGYALQSPTQPSLFDEAKVGLGMRS
CCCCEECCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHCCCHHH
IIGDIRDLAFLQKAMQECQPEIVIHMAAQPLVRYSYANPVETYSTNVMGTVHLLETVRHA
HHHHHHHHHHHHHHHHHCCHHEEEEHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHC
PSVKAVVNITTDKCYENREWAWGYRENEPMGGYDPYSNSKGCAELVSSAYRSSFFNANSH
CCCEEEEEEEHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
AQHGVGLATVRAGNVIGGGDWAQDRLIPDILAAFEQGQRVNIRNPHSIRPWQHVLEPLRG
CCCCCCEEEEECCCEECCCCCHHHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHHHH
YLTLAERLFEHGPSYAEGWNFGPNDEDAKPVGWIVEQMAAMWGEGAQSQIDNGEHPHEAN
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCC
YLKLDISKARSRLDWHPTLRLNDALALIIEWSKQRQAGADIRELTLAQIHSYQTLTEN
EEEEEHHHHHHCCCCCCCEEECCCEEEEEEHHHHHHCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1710759; 11677609 [H]