| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91789848
Identifier: 91789848
GI number: 91789848
Start: 4205891
End: 4208224
Strand: Direct
Name: 91789848
Synonym: Bpro_4008
Alternate gene names: NA
Gene position: 4205891-4208224 (Clockwise)
Preceding gene: 91789847
Following gene: 91789849
Centisome position: 80.88
GC content: 41.77
Gene sequence:
>2334_bases ATGCAAGGTAATATTAAGTTGGCTTTTCAACGCATTTGTCGGCAGCTATCAAATAACAATGAAAGAGTTAAATTCTTTGC ATTAGCATTAATTTTCTCGACTGTATTTTTCAGCTCTTACCTATTCACAAAAAATCCACAGGTCAATTTTTTTGGCGATG TGGCTATCCTGTATTTTCCGCAATTTGTCGAAGGCTATCATATGGCCAGGAGCGGGGCACTCGCTGGTATTGACTTTTTG ACAAGCAATGGTTCCACGGCGTACTTCCTAAGACCGAACATTCCCGTCTATTACCCCCCCTATCAACTAACCTACGCTCT GTTTCGTTTCGAAACCATTGAGGGTCTAGCTCGTGCATTTGTGTTCATTGCATACGCACACGCTATCTTGGCTGCCTATT ACTGCATGCGAATCGGGCGCAAGTATTTTCAAATGGCGCAAGGAACATCGGTACTGTTCTCCGTGTTGTATTTTGGCGCT ATTGCATATTACGCATTTACCGCGCCTCCTTTTTATTACGTCGCAGCTCTTTTCCCATTCTTGCTTTATTTCGCGCTTCA GTCAGTCGAAAAAATGAATTGGTGGCGCATTACGCTACATTCATTTCCCTATGTAATGGTTTTCCTCTCCGGCTATCTGC CATTGGATGTGAATGCAGTATTAATAGCATTGTTGTTTTCAGTGGTTTATTTTTGGCAGAAAAAAAATAGCGAAGCTCAA GCTTTTGGCCAACTTCTGATAAGGCTCTTTACACCCGTTGTGTTGGCTAGCGCTGTTGTATTGTCGTTATATTTGGCGAT GTTTTTGTATCATAAACAAGTTCCAGGCGTAGCCGAAGGTGTTTGGCATTCTGCTCATCAATTTTCATTTGAATCCAAAG ATATCTTTGCTCTATTATCGAGGGCGTTCCCACCTAGCAATCCAGGAACAGGAACACCATTCGTTCAATTAGGACTTGCT CCAGTATTTCTTTTAGCTCTTGCCTTTTCCCAACGGGAAAAATTAGCGATAGCACCATTAGAAGCCAAAATAATTGCATT ATCACTACTGATATTTTCTTTTTATCTTTTACTCGCATTTGGTCAAGCGTCGGGCTTGCCCGATATGTTTTATTTTGTGA TGCCAGTGATTGGGCGTATGCACTTTTATGGGCGTTACCTCTTGATCGCTTCATTTTTCTTTTATTTAGCGGTCGCAATT TCTTTCAAATATCTTGTTCAGATACGAAGAGAATTGCCTATCGGACGCTGGCTAGCTGTTATCTTCTTTGTAATGTTTGC CGCAGAAGCATACAATCAGATCGGCCATCCCGCGTGGCCAAATATGAAGCTATTAGTCATTGAACTTCTGATGATTAGTT TGATATTGATCTCCCTATCTGCACAACAAAATTTCTATGCCTTTGCAGGTGCAATTGGAGTGTCATTCTTTATACATGCT GCAAGCTTCAACTCCTATACGAATTCGTTTAGTCAAGTCGCAGCGGGTCCCTATAAGAATGACGTCGCCTTCTCTCCTGA ACGTCGAGAACTTTTGATTAATTATTTCAAACAGAATTCAAATAAATATTTGATCAAATACGCCGACATTACCTCCGATA TAGAAAAACCAAACGGAGTCATGCTTAACTTCCCATGGATGGCAAGTAATAAACTAAAGCTATCAAATTATATGGGTTAC GAACCCCATATGGCGTTAGATCGCGACTATATGGCCAGATTCCCACACCCTTATTATGGGAAAATTAACGTGCCCTGGTT ATTGCGGACCGGCGCTGATTTCATCATTTACAACCAAGCGGCTTGGGCCATTAATTCTCCCGAGCTGGAGCAATTGATTG ATAAAAGTATTCCAGAACTTGATCTTCAGTATGGGTATAAAGCAGTAAAACTGAAAGACGCATCAGGTCTAGTGGATTAT ATTCCCAACAGAAATACAGGTGATTTCGACAATGGCATTGTGCGCGTTTCGAATACCACTGGAACGGCGTTAGTTACTGG TTTTGAGACAGATTTTGTGTCTCGCGTTCATTTTCAAGTTGAGAGCACTTCACCAGTTACCGTGCGCTACGCGCTTTTCC CTCACAAGATGATGGAACTCCGCGTTGACGGCAAACGTTCCAATGTGACGCTTAAGGATGGCTTGCTAGAATTATCGCTA CCCCCTGGTCAACATTTAGTTGAATATAATTACAAAAACCGGCTGCATCAGTTATTCACCATAATTTACCGGATTTACTT CATTCTTCTCTTTGGCATAGTGGGTTGGCAGGCCTGGATAGGGCGTCGCTCATTTCGGAGTTTTTTAATACAGAAAAATC AGGTAGGAATCTAG
Upstream 100 bases:
>100_bases CTCGGGCGAATTTACCAGCAGGTAAAGAGAAAGCCTTTGGTCATTGTTGAAGCCGAGCTTGATGGCCATAGTGCCAGACA TGATGGACTGGAAAAAATAC
Downstream 100 bases:
>100_bases AACCATGAAAGCAGTCATCCTCGCAGGCGGTTTAGGGACCCGCATTTCCGAAGAAACCCACCTCAAACCGAAACCCATGG TGGAAATCGGCGGGAAGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 777; Mature: 777
Protein sequence:
>777_residues MQGNIKLAFQRICRQLSNNNERVKFFALALIFSTVFFSSYLFTKNPQVNFFGDVAILYFPQFVEGYHMARSGALAGIDFL TSNGSTAYFLRPNIPVYYPPYQLTYALFRFETIEGLARAFVFIAYAHAILAAYYCMRIGRKYFQMAQGTSVLFSVLYFGA IAYYAFTAPPFYYVAALFPFLLYFALQSVEKMNWWRITLHSFPYVMVFLSGYLPLDVNAVLIALLFSVVYFWQKKNSEAQ AFGQLLIRLFTPVVLASAVVLSLYLAMFLYHKQVPGVAEGVWHSAHQFSFESKDIFALLSRAFPPSNPGTGTPFVQLGLA PVFLLALAFSQREKLAIAPLEAKIIALSLLIFSFYLLLAFGQASGLPDMFYFVMPVIGRMHFYGRYLLIASFFFYLAVAI SFKYLVQIRRELPIGRWLAVIFFVMFAAEAYNQIGHPAWPNMKLLVIELLMISLILISLSAQQNFYAFAGAIGVSFFIHA ASFNSYTNSFSQVAAGPYKNDVAFSPERRELLINYFKQNSNKYLIKYADITSDIEKPNGVMLNFPWMASNKLKLSNYMGY EPHMALDRDYMARFPHPYYGKINVPWLLRTGADFIIYNQAAWAINSPELEQLIDKSIPELDLQYGYKAVKLKDASGLVDY IPNRNTGDFDNGIVRVSNTTGTALVTGFETDFVSRVHFQVESTSPVTVRYALFPHKMMELRVDGKRSNVTLKDGLLELSL PPGQHLVEYNYKNRLHQLFTIIYRIYFILLFGIVGWQAWIGRRSFRSFLIQKNQVGI
Sequences:
>Translated_777_residues MQGNIKLAFQRICRQLSNNNERVKFFALALIFSTVFFSSYLFTKNPQVNFFGDVAILYFPQFVEGYHMARSGALAGIDFL TSNGSTAYFLRPNIPVYYPPYQLTYALFRFETIEGLARAFVFIAYAHAILAAYYCMRIGRKYFQMAQGTSVLFSVLYFGA IAYYAFTAPPFYYVAALFPFLLYFALQSVEKMNWWRITLHSFPYVMVFLSGYLPLDVNAVLIALLFSVVYFWQKKNSEAQ AFGQLLIRLFTPVVLASAVVLSLYLAMFLYHKQVPGVAEGVWHSAHQFSFESKDIFALLSRAFPPSNPGTGTPFVQLGLA PVFLLALAFSQREKLAIAPLEAKIIALSLLIFSFYLLLAFGQASGLPDMFYFVMPVIGRMHFYGRYLLIASFFFYLAVAI SFKYLVQIRRELPIGRWLAVIFFVMFAAEAYNQIGHPAWPNMKLLVIELLMISLILISLSAQQNFYAFAGAIGVSFFIHA ASFNSYTNSFSQVAAGPYKNDVAFSPERRELLINYFKQNSNKYLIKYADITSDIEKPNGVMLNFPWMASNKLKLSNYMGY EPHMALDRDYMARFPHPYYGKINVPWLLRTGADFIIYNQAAWAINSPELEQLIDKSIPELDLQYGYKAVKLKDASGLVDY IPNRNTGDFDNGIVRVSNTTGTALVTGFETDFVSRVHFQVESTSPVTVRYALFPHKMMELRVDGKRSNVTLKDGLLELSL PPGQHLVEYNYKNRLHQLFTIIYRIYFILLFGIVGWQAWIGRRSFRSFLIQKNQVGI >Mature_777_residues MQGNIKLAFQRICRQLSNNNERVKFFALALIFSTVFFSSYLFTKNPQVNFFGDVAILYFPQFVEGYHMARSGALAGIDFL TSNGSTAYFLRPNIPVYYPPYQLTYALFRFETIEGLARAFVFIAYAHAILAAYYCMRIGRKYFQMAQGTSVLFSVLYFGA IAYYAFTAPPFYYVAALFPFLLYFALQSVEKMNWWRITLHSFPYVMVFLSGYLPLDVNAVLIALLFSVVYFWQKKNSEAQ AFGQLLIRLFTPVVLASAVVLSLYLAMFLYHKQVPGVAEGVWHSAHQFSFESKDIFALLSRAFPPSNPGTGTPFVQLGLA PVFLLALAFSQREKLAIAPLEAKIIALSLLIFSFYLLLAFGQASGLPDMFYFVMPVIGRMHFYGRYLLIASFFFYLAVAI SFKYLVQIRRELPIGRWLAVIFFVMFAAEAYNQIGHPAWPNMKLLVIELLMISLILISLSAQQNFYAFAGAIGVSFFIHA ASFNSYTNSFSQVAAGPYKNDVAFSPERRELLINYFKQNSNKYLIKYADITSDIEKPNGVMLNFPWMASNKLKLSNYMGY EPHMALDRDYMARFPHPYYGKINVPWLLRTGADFIIYNQAAWAINSPELEQLIDKSIPELDLQYGYKAVKLKDASGLVDY IPNRNTGDFDNGIVRVSNTTGTALVTGFETDFVSRVHFQVESTSPVTVRYALFPHKMMELRVDGKRSNVTLKDGLLELSL PPGQHLVEYNYKNRLHQLFTIIYRIYFILLFGIVGWQAWIGRRSFRSFLIQKNQVGI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 88769; Mature: 88769
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQGNIKLAFQRICRQLSNNNERVKFFALALIFSTVFFSSYLFTKNPQVNFFGDVAILYFP CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHH QFVEGYHMARSGALAGIDFLTSNGSTAYFLRPNIPVYYPPYQLTYALFRFETIEGLARAF HHHHHHHHHHCCCCEEEEEEECCCCEEEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHH VFIAYAHAILAAYYCMRIGRKYFQMAQGTSVLFSVLYFGAIAYYAFTAPPFYYVAALFPF HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH LLYFALQSVEKMNWWRITLHSFPYVMVFLSGYLPLDVNAVLIALLFSVVYFWQKKNSEAQ HHHHHHHHHHHCCEEEEEHHHCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHH AFGQLLIRLFTPVVLASAVVLSLYLAMFLYHKQVPGVAEGVWHSAHQFSFESKDIFALLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHH RAFPPSNPGTGTPFVQLGLAPVFLLALAFSQREKLAIAPLEAKIIALSLLIFSFYLLLAF HCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHH GQASGLPDMFYFVMPVIGRMHFYGRYLLIASFFFYLAVAISFKYLVQIRRELPIGRWLAV HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH IFFVMFAAEAYNQIGHPAWPNMKLLVIELLMISLILISLSAQQNFYAFAGAIGVSFFIHA HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH ASFNSYTNSFSQVAAGPYKNDVAFSPERRELLINYFKQNSNKYLIKYADITSDIEKPNGV HHCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCHHCCCCCCCE MLNFPWMASNKLKLSNYMGYEPHMALDRDYMARFPHPYYGKINVPWLLRTGADFIIYNQA EEECCCCCCCCEEHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCCEEEECCCCEEEEECC AWAINSPELEQLIDKSIPELDLQYGYKAVKLKDASGLVDYIPNRNTGDFDNGIVRVSNTT CCCCCCHHHHHHHHCCCCCCCHHCCCEEEEEECCCCHHHHCCCCCCCCCCCCEEEEECCC GTALVTGFETDFVSRVHFQVESTSPVTVRYALFPHKMMELRVDGKRSNVTLKDGLLELSL CCEEEEECCHHHHHHEEEEEECCCCEEEEEEECCCCHHHEEECCCCCCEEEECCEEEEEC PPGQHLVEYNYKNRLHQLFTIIYRIYFILLFGIVGWQAWIGRRSFRSFLIQKNQVGI CCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MQGNIKLAFQRICRQLSNNNERVKFFALALIFSTVFFSSYLFTKNPQVNFFGDVAILYFP CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHH QFVEGYHMARSGALAGIDFLTSNGSTAYFLRPNIPVYYPPYQLTYALFRFETIEGLARAF HHHHHHHHHHCCCCEEEEEEECCCCEEEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHH VFIAYAHAILAAYYCMRIGRKYFQMAQGTSVLFSVLYFGAIAYYAFTAPPFYYVAALFPF HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH LLYFALQSVEKMNWWRITLHSFPYVMVFLSGYLPLDVNAVLIALLFSVVYFWQKKNSEAQ HHHHHHHHHHHCCEEEEEHHHCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHH AFGQLLIRLFTPVVLASAVVLSLYLAMFLYHKQVPGVAEGVWHSAHQFSFESKDIFALLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHH RAFPPSNPGTGTPFVQLGLAPVFLLALAFSQREKLAIAPLEAKIIALSLLIFSFYLLLAF HCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHH GQASGLPDMFYFVMPVIGRMHFYGRYLLIASFFFYLAVAISFKYLVQIRRELPIGRWLAV HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH IFFVMFAAEAYNQIGHPAWPNMKLLVIELLMISLILISLSAQQNFYAFAGAIGVSFFIHA HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH ASFNSYTNSFSQVAAGPYKNDVAFSPERRELLINYFKQNSNKYLIKYADITSDIEKPNGV HHCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCHHCCCCCCCE MLNFPWMASNKLKLSNYMGYEPHMALDRDYMARFPHPYYGKINVPWLLRTGADFIIYNQA EEECCCCCCCCEEHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCCEEEECCCCEEEEECC AWAINSPELEQLIDKSIPELDLQYGYKAVKLKDASGLVDYIPNRNTGDFDNGIVRVSNTT CCCCCCHHHHHHHHCCCCCCCHHCCCEEEEEECCCCHHHHCCCCCCCCCCCCEEEEECCC GTALVTGFETDFVSRVHFQVESTSPVTVRYALFPHKMMELRVDGKRSNVTLKDGLLELSL CCEEEEECCHHHHHHEEEEEECCCCEEEEEEECCCCHHHEEECCCCCCEEEECCEEEEEC PPGQHLVEYNYKNRLHQLFTIIYRIYFILLFGIVGWQAWIGRRSFRSFLIQKNQVGI CCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA