| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is wbbL [H]
Identifier: 91789830
GI number: 91789830
Start: 4184655
End: 4185569
Strand: Reverse
Name: wbbL [H]
Synonym: Bpro_3990
Alternate gene names: 91789830
Gene position: 4185569-4184655 (Counterclockwise)
Preceding gene: 91789831
Following gene: 91789829
Centisome position: 80.49
GC content: 56.07
Gene sequence:
>915_bases GTGATCATTGTCAATTGGAATGCAGGTTGGCAACTCCGCGCATGTGTTGACTCTGTCGTTCAACACGCCGCCACAGTGGT AAAAAAAATAATCGTGGTGGACAACGGCTCAGTAGATGGATCGGACCGCAATATTGAAAGCTTGTCCAGTGTTACCGTGA TTCACGCAGGCGCCAATCTGGGGTTCGGCAAGGCCTGCAATCTGGGCTCGCAGAACGCCGATAGCGAATACCTGTTGTTC CTCAATCCCGATGCTGCGTTATATGCAGACACTTTGCCCAAGGCGTTGTCTTATATGCAAGACCCTGCCAACGCCAGCGT AGGCATATGCGGGGTGCAATTACTGGATGAAGCCGGCCACATATCGCGCAGCTGCACACGCTTTCCCTCAGCGCTCGGAT TTGTCACGCACGCAGTGGGACTGGATCGTATTTTTCCTCGACTGGGCCACTTCATGGCCGAGTGGGACCATGCACAAACC CGCGAAGTGGATCACGTGATTGGCGCTTTCTTTCTGGTCCGGCGCGCCTTGTTTGAAGCCTTGGGTGGATTTGACGAGCG TTTTTTCGTCTATCTGGAGGATCTGGACTTTTCTTGTCGTGCCCGGCGGGCCGGATGGCGCAGCGTGTATTTGGCCGATA TGCAGGCTTTTCATGCGGGCGGCGGTACATCCAATCAAGTGAAAGCGCGCCGCTTGTTTTATTCGCTGCGCAGCCGTTTG TTGTACGCGTTCAAGCATTTCTCGTGGCTGGGGGCTGTGGGGGTGTTGTTGGCCACGCTTTTGGTGGAGCCGTGGTCCCG ATCGGTTCTGGCTCTGCTGCGGCGTTCATGGTCGGGGTTGAAAGAGACTTGGGCCGCCTACGGTCTGCTGTGGCGCTGGC TGCCGCAGTGGGTGTTCAAAGGGGTTACCCGTTGA
Upstream 100 bases:
>100_bases AGGGCGGCAAATAAATGAATCTGGATTCGCATTGAAATTGCAGAGGGTGACCGCACAAACATGCTTTCTCTGAGAATCAT TGGCAGTGAACTCCATTGAT
Downstream 100 bases:
>100_bases AGATGATCAAGGTACTGGCGCTACCCAAATACGGCCGCATGGGGGCATCGTCGCGGCTGCGGTTCGCGCAGTACCTGCCC TGGCTGCAGCAAGAGGGCGT
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: Rhamnosyltransferase [H]
Number of amino acids: Translated: 304; Mature: 304
Protein sequence:
>304_residues MIIVNWNAGWQLRACVDSVVQHAATVVKKIIVVDNGSVDGSDRNIESLSSVTVIHAGANLGFGKACNLGSQNADSEYLLF LNPDAALYADTLPKALSYMQDPANASVGICGVQLLDEAGHISRSCTRFPSALGFVTHAVGLDRIFPRLGHFMAEWDHAQT REVDHVIGAFFLVRRALFEALGGFDERFFVYLEDLDFSCRARRAGWRSVYLADMQAFHAGGGTSNQVKARRLFYSLRSRL LYAFKHFSWLGAVGVLLATLLVEPWSRSVLALLRRSWSGLKETWAAYGLLWRWLPQWVFKGVTR
Sequences:
>Translated_304_residues MIIVNWNAGWQLRACVDSVVQHAATVVKKIIVVDNGSVDGSDRNIESLSSVTVIHAGANLGFGKACNLGSQNADSEYLLF LNPDAALYADTLPKALSYMQDPANASVGICGVQLLDEAGHISRSCTRFPSALGFVTHAVGLDRIFPRLGHFMAEWDHAQT REVDHVIGAFFLVRRALFEALGGFDERFFVYLEDLDFSCRARRAGWRSVYLADMQAFHAGGGTSNQVKARRLFYSLRSRL LYAFKHFSWLGAVGVLLATLLVEPWSRSVLALLRRSWSGLKETWAAYGLLWRWLPQWVFKGVTR >Mature_304_residues MIIVNWNAGWQLRACVDSVVQHAATVVKKIIVVDNGSVDGSDRNIESLSSVTVIHAGANLGFGKACNLGSQNADSEYLLF LNPDAALYADTLPKALSYMQDPANASVGICGVQLLDEAGHISRSCTRFPSALGFVTHAVGLDRIFPRLGHFMAEWDHAQT REVDHVIGAFFLVRRALFEALGGFDERFFVYLEDLDFSCRARRAGWRSVYLADMQAFHAGGGTSNQVKARRLFYSLRSRL LYAFKHFSWLGAVGVLLATLLVEPWSRSVLALLRRSWSGLKETWAAYGLLWRWLPQWVFKGVTR
Specific function: Involved in the biosynthesis of the mycolylarabinogalactan-peptidoglycan (mAGP) complex, an essential component the mycobacterial cell wall. Catalyzes the transfer of the rhamnosyl moiety from dTDP-rhamnosyl (dTDP-Rha) onto the undecaprenyl-pyrophosphoryl
COG id: COG1216
COG function: function code R; Predicted glycosyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 33872; Mature: 33872
Theoretical pI: Translated: 8.95; Mature: 8.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIVNWNAGWQLRACVDSVVQHAATVVKKIIVVDNGSVDGSDRNIESLSSVTVIHAGANL CEEEECCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHEEEEEECCCC GFGKACNLGSQNADSEYLLFLNPDAALYADTLPKALSYMQDPANASVGICGVQLLDEAGH CCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH ISRSCTRFPSALGFVTHAVGLDRIFPRLGHFMAEWDHAQTREVDHVIGAFFLVRRALFEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH LGGFDERFFVYLEDLDFSCRARRAGWRSVYLADMQAFHAGGGTSNQVKARRLFYSLRSRL HCCCCCEEEEEEECCCCHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH LYAFKHFSWLGAVGVLLATLLVEPWSRSVLALLRRSWSGLKETWAAYGLLWRWLPQWVFK HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVTR CCCC >Mature Secondary Structure MIIVNWNAGWQLRACVDSVVQHAATVVKKIIVVDNGSVDGSDRNIESLSSVTVIHAGANL CEEEECCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHEEEEEECCCC GFGKACNLGSQNADSEYLLFLNPDAALYADTLPKALSYMQDPANASVGICGVQLLDEAGH CCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH ISRSCTRFPSALGFVTHAVGLDRIFPRLGHFMAEWDHAQTREVDHVIGAFFLVRRALFEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH LGGFDERFFVYLEDLDFSCRARRAGWRSVYLADMQAFHAGGGTSNQVKARRLFYSLRSRL HCCCCCEEEEEEECCCCHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH LYAFKHFSWLGAVGVLLATLLVEPWSRSVLALLRRSWSGLKETWAAYGLLWRWLPQWVFK HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVTR CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]