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The map label for this gene is capD [H]

Identifier: 91789823

GI number: 91789823

Start: 4176579

End: 4178510

Strand: Reverse

Name: capD [H]

Synonym: Bpro_3983

Alternate gene names: 91789823

Gene position: 4178510-4176579 (Counterclockwise)

Preceding gene: 91789824

Following gene: 91789822

Centisome position: 80.35

GC content: 64.7

Gene sequence:

>1932_bases
ATGCAGCAAATAATCCTGGCGTGGCCGCGCGCCGTCAAGCGGCTGGTGGTGGCCGGGCTGGATGTGGTGATGGCGGTGGC
TGCCACCTGGCTGGCATTTTCCCTGCGCCTGGATGAACCTCACATTCCTCAGCGTGCTGAAGAATGGTGGGTGTATGCGC
TGTGCCCCCTGCTGGCGCTGCCCGTCTTCATCAAGTTTGGGCTCTACCGCGCCATTTTCAGGTACACCGGCCGGGCCGCA
CTGGTGGCAACCACGCAGGCGATTGCCGTCTATGGCGTGTTGTTGCTGGCCGCCCTGATGTGGCTGCAGTGGCCCAATGT
GCCGCGCAGCCTGGGTATTTTGCAGCCCCTGATCTTTTTGTTATTGGTCGGCTCCAGCCGGGCCATGGCCCGGTTCTGGC
TGGCGGGCCTGGGCCACCCACATCGAACAGCCGAAGGGCGCTTGCTGATATTTGGTGCCGGTACGGCAGGCGTGCAGACG
GCCTCGGCGATCGAGGACTCGGGGCAGTATGTGCTGTTGGGTTTTGTGGACGATGACCCGGGAAAAGTGGGGCGCGATAT
CAACGGCGTGCCTGTTTTTTCGCCGGCGCAGGTCTCGGGCCTGGTGCTGTACCAGGGGGTGACCGACATCCTGCTGGCCC
TGCCCAGTGCCTCCCGGGAGCGCCGCAATGCGATTATTGACAGCTTGAGCGAGTTACCGGTTCACGTCCGGTCGCTGCCG
GGTCTGGCCGATCTGGCCAGTGGCCGTGTCACCGTGCGTGATTTCCGTGAGCTGGATGTGGAGGACCTGCTGGGCCGGGA
CCCGGTGCCCCCTGATGCCGAATTGCTGGCGCGCGACCTGACGGGCAAGGTGGTGCTGGTCACCGGTGCGGGCGGCAGCA
TCGGCAGCGAGCTGTGCCGGCAAATTGCGCTGCAGCAACCCCGCCAGCTGCTGCTGCTGGACCACAACGAGTTTGGCTTG
TACAGCATCCACCAGGAACTGCTGGCCCTGTGTTCGGTGCAGGGCCTCAGGATCGAGCTGGTGCCCCTGCTGGGCAGTGT
CGCCAATTACCCGCGCATGGCGGCGCTCTGCCAGCGCTACCGGCCGGTCACGGTTTACCACGCGGCGGCCTACAAGCATG
TGCCGCTCGTGGAAAGCAACGCCAGCGAAGGTATTGCAAACAATGTGTTCGGCACCTTCAACATGGCCCGGGCGGCGATA
GAGCAAGGCGCCAGCCGCTTTGTGCTGGTGTCTACCGACAAGGCCGTCAGGCCGACCAATGTGATGGGGGCCAGCAAACG
CATGGCTGAGCTGGTGCTGCAGGCGCTGGCCGCCGAGACGGCACCAATGCTTTGTGGCGGTGGTGGCAGCACTGAAGCGC
CACCACGCGGAGTGGTCAACCAGACCTGTTTCACCATGGTGCGTTTCGGCAACGTGCTGGACTCAAGCGGTAGCGTGGTC
CCGCTGTTTCGCCGGCAGATCGCGGAAGGCGGGCCGCTGACGGTCACGCATGCCGAGGTCACCCGCTACTTCATGACCAT
TCCGGAAGCCGCCCAGCTGGTGCTGCAGGCCGGTGCCATGGCCAGCGGCGGTGACGTGTTCGTGCTCGACATGGGCGCGC
CGGTCAAGATACTGGATCTGGCGCGCCGCATGGTTGAGCTGTCGGGCCTGACAGTGCGCGACGCCGAATCGCCGGACGGT
GACATCGACATTGAAGTCACCGGCTTGCGCCCTGGCGAAAAGCTGTACGAGGAATTGCTGATTGGGAACAACCCGCAAGC
AACCGCGCATCCCCGCATCATGAAGGCGCATGAATCCCTGGCGCCGTGGCCGCAGCTGTCGGCCGAATTGAGGGCGCTGG
GCGTGGCGGTGCAGCAGGATGACCTGGCCGCCATCAACGGCCTGCTGGCACGGCATGTGCAGGGTTACAGCCCCAAACCG
GGCGCGTCCTGA

Upstream 100 bases:

>100_bases
CGGTCGCGGTTTGACGCCGCGCTGGCTTGCAACGCTGCTAACCGAGGGGCGGACCAAAGAAGATTTCGCCATCAAGGACT
GATCCGGCGCAACAAGTTAC

Downstream 100 bases:

>100_bases
GGGACCGGCACGGGTATTTAGGGGCCGGCACGCGCATGCGGCACAATTTGCACATTGACTTTTCCTGAATAACTGCCATG
ACCCAACCCACCGTAACCGC

Product: polysaccharide biosynthesis protein CapD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 643; Mature: 643

Protein sequence:

>643_residues
MQQIILAWPRAVKRLVVAGLDVVMAVAATWLAFSLRLDEPHIPQRAEEWWVYALCPLLALPVFIKFGLYRAIFRYTGRAA
LVATTQAIAVYGVLLLAALMWLQWPNVPRSLGILQPLIFLLLVGSSRAMARFWLAGLGHPHRTAEGRLLIFGAGTAGVQT
ASAIEDSGQYVLLGFVDDDPGKVGRDINGVPVFSPAQVSGLVLYQGVTDILLALPSASRERRNAIIDSLSELPVHVRSLP
GLADLASGRVTVRDFRELDVEDLLGRDPVPPDAELLARDLTGKVVLVTGAGGSIGSELCRQIALQQPRQLLLLDHNEFGL
YSIHQELLALCSVQGLRIELVPLLGSVANYPRMAALCQRYRPVTVYHAAAYKHVPLVESNASEGIANNVFGTFNMARAAI
EQGASRFVLVSTDKAVRPTNVMGASKRMAELVLQALAAETAPMLCGGGGSTEAPPRGVVNQTCFTMVRFGNVLDSSGSVV
PLFRRQIAEGGPLTVTHAEVTRYFMTIPEAAQLVLQAGAMASGGDVFVLDMGAPVKILDLARRMVELSGLTVRDAESPDG
DIDIEVTGLRPGEKLYEELLIGNNPQATAHPRIMKAHESLAPWPQLSAELRALGVAVQQDDLAAINGLLARHVQGYSPKP
GAS

Sequences:

>Translated_643_residues
MQQIILAWPRAVKRLVVAGLDVVMAVAATWLAFSLRLDEPHIPQRAEEWWVYALCPLLALPVFIKFGLYRAIFRYTGRAA
LVATTQAIAVYGVLLLAALMWLQWPNVPRSLGILQPLIFLLLVGSSRAMARFWLAGLGHPHRTAEGRLLIFGAGTAGVQT
ASAIEDSGQYVLLGFVDDDPGKVGRDINGVPVFSPAQVSGLVLYQGVTDILLALPSASRERRNAIIDSLSELPVHVRSLP
GLADLASGRVTVRDFRELDVEDLLGRDPVPPDAELLARDLTGKVVLVTGAGGSIGSELCRQIALQQPRQLLLLDHNEFGL
YSIHQELLALCSVQGLRIELVPLLGSVANYPRMAALCQRYRPVTVYHAAAYKHVPLVESNASEGIANNVFGTFNMARAAI
EQGASRFVLVSTDKAVRPTNVMGASKRMAELVLQALAAETAPMLCGGGGSTEAPPRGVVNQTCFTMVRFGNVLDSSGSVV
PLFRRQIAEGGPLTVTHAEVTRYFMTIPEAAQLVLQAGAMASGGDVFVLDMGAPVKILDLARRMVELSGLTVRDAESPDG
DIDIEVTGLRPGEKLYEELLIGNNPQATAHPRIMKAHESLAPWPQLSAELRALGVAVQQDDLAAINGLLARHVQGYSPKP
GAS
>Mature_643_residues
MQQIILAWPRAVKRLVVAGLDVVMAVAATWLAFSLRLDEPHIPQRAEEWWVYALCPLLALPVFIKFGLYRAIFRYTGRAA
LVATTQAIAVYGVLLLAALMWLQWPNVPRSLGILQPLIFLLLVGSSRAMARFWLAGLGHPHRTAEGRLLIFGAGTAGVQT
ASAIEDSGQYVLLGFVDDDPGKVGRDINGVPVFSPAQVSGLVLYQGVTDILLALPSASRERRNAIIDSLSELPVHVRSLP
GLADLASGRVTVRDFRELDVEDLLGRDPVPPDAELLARDLTGKVVLVTGAGGSIGSELCRQIALQQPRQLLLLDHNEFGL
YSIHQELLALCSVQGLRIELVPLLGSVANYPRMAALCQRYRPVTVYHAAAYKHVPLVESNASEGIANNVFGTFNMARAAI
EQGASRFVLVSTDKAVRPTNVMGASKRMAELVLQALAAETAPMLCGGGGSTEAPPRGVVNQTCFTMVRFGNVLDSSGSVV
PLFRRQIAEGGPLTVTHAEVTRYFMTIPEAAQLVLQAGAMASGGDVFVLDMGAPVKILDLARRMVELSGLTVRDAESPDG
DIDIEVTGLRPGEKLYEELLIGNNPQATAHPRIMKAHESLAPWPQLSAELRALGVAVQQDDLAAINGLLARHVQGYSPKP
GAS

Specific function: Required for the biosynthesis of type 1 capsular polysaccharide [H]

COG id: COG1086

COG function: function code MG; Predicted nucleoside-diphosphate sugar epimerases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR003869 [H]

Pfam domain/function: PF02719 Polysacc_synt_2 [H]

EC number: NA

Molecular weight: Translated: 69104; Mature: 69104

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQIILAWPRAVKRLVVAGLDVVMAVAATWLAFSLRLDEPHIPQRAEEWWVYALCPLLAL
CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHH
PVFIKFGLYRAIFRYTGRAALVATTQAIAVYGVLLLAALMWLQWPNVPRSLGILQPLIFL
HHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
LLVGSSRAMARFWLAGLGHPHRTAEGRLLIFGAGTAGVQTASAIEDSGQYVLLGFVDDDP
HHHCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHHHCCCCEEEEEEEECCC
GKVGRDINGVPVFSPAQVSGLVLYQGVTDILLALPSASRERRNAIIDSLSELPVHVRSLP
CCCCCCCCCCCCCCCCHHCCEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHCC
GLADLASGRVTVRDFRELDVEDLLGRDPVPPDAELLARDLTGKVVLVTGAGGSIGSELCR
CHHHHHCCCEEEHHHHHCCHHHHHCCCCCCCCHHHHHHHCCCCEEEEECCCCCHHHHHHH
QIALQQPRQLLLLDHNEFGLYSIHQELLALCSVQGLRIELVPLLGSVANYPRMAALCQRY
HHHHHCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEHHHHHHHHCCHHHHHHHHHC
RPVTVYHAAAYKHVPLVESNASEGIANNVFGTFNMARAAIEQGASRFVLVSTDKAVRPTN
CCEEEEEHHHHCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCC
VMGASKRMAELVLQALAAETAPMLCGGGGSTEAPPRGVVNQTCFTMVRFGNVLDSSGSVV
CCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCH
PLFRRQIAEGGPLTVTHAEVTRYFMTIPEAAQLVLQAGAMASGGDVFVLDMGAPVKILDL
HHHHHHHCCCCCEEEEHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHH
ARRMVELSGLTVRDAESPDGDIDIEVTGLRPGEKLYEELLIGNNPQATAHPRIMKAHESL
HHHHHHHCCCEEECCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHC
APWPQLSAELRALGVAVQQDDLAAINGLLARHVQGYSPKPGAS
CCCHHHHHHHHHHHHEECCCHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MQQIILAWPRAVKRLVVAGLDVVMAVAATWLAFSLRLDEPHIPQRAEEWWVYALCPLLAL
CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHH
PVFIKFGLYRAIFRYTGRAALVATTQAIAVYGVLLLAALMWLQWPNVPRSLGILQPLIFL
HHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
LLVGSSRAMARFWLAGLGHPHRTAEGRLLIFGAGTAGVQTASAIEDSGQYVLLGFVDDDP
HHHCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHHHCCCCEEEEEEEECCC
GKVGRDINGVPVFSPAQVSGLVLYQGVTDILLALPSASRERRNAIIDSLSELPVHVRSLP
CCCCCCCCCCCCCCCCHHCCEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHCC
GLADLASGRVTVRDFRELDVEDLLGRDPVPPDAELLARDLTGKVVLVTGAGGSIGSELCR
CHHHHHCCCEEEHHHHHCCHHHHHCCCCCCCCHHHHHHHCCCCEEEEECCCCCHHHHHHH
QIALQQPRQLLLLDHNEFGLYSIHQELLALCSVQGLRIELVPLLGSVANYPRMAALCQRY
HHHHHCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEHHHHHHHHCCHHHHHHHHHC
RPVTVYHAAAYKHVPLVESNASEGIANNVFGTFNMARAAIEQGASRFVLVSTDKAVRPTN
CCEEEEEHHHHCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCC
VMGASKRMAELVLQALAAETAPMLCGGGGSTEAPPRGVVNQTCFTMVRFGNVLDSSGSVV
CCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCH
PLFRRQIAEGGPLTVTHAEVTRYFMTIPEAAQLVLQAGAMASGGDVFVLDMGAPVKILDL
HHHHHHHCCCCCEEEEHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHH
ARRMVELSGLTVRDAESPDGDIDIEVTGLRPGEKLYEELLIGNNPQATAHPRIMKAHESL
HHHHHHHCCCEEECCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHC
APWPQLSAELRALGVAVQQDDLAAINGLLARHVQGYSPKPGAS
CCCHHHHHHHHHHHHEECCCHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7961465 [H]