Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is 91789754

Identifier: 91789754

GI number: 91789754

Start: 4107570

End: 4108076

Strand: Direct

Name: 91789754

Synonym: Bpro_3913

Alternate gene names: NA

Gene position: 4107570-4108076 (Clockwise)

Preceding gene: 91789753

Following gene: 91789755

Centisome position: 78.99

GC content: 63.12

Gene sequence:

>507_bases
ATGATTCGACTGGCCTGGTTGTTTTCAGCCGCAAGCGTGGCTGTTTTGGTCGCGGCCTGCGGCGGAGGCGATGGCGGCAC
GGCCGCACTGATATCTTCCGAGCCGATCGACAAATACGTTGGCAACTGGACCAACTGCCAGGCCACCGTCGTTAGCGGCG
TCAATGTCTCCGCCCTGACGAGCTTCACGGCCACCAAGACTGACGCGACCCGCGGCTCCTTCACGACGACGGTCACCGTT
TTCGCCATCACCAGCTGCACAGGTCTCAAGCTCGCGGATCCCGTCCCCGTCCCGCAACTCTCGGGAAACGTGGCCATCGA
CAGCGTGGGAACGGGGCCCTCCGGATCTGACAAGATCACCATCACGCCTTCGACCCTGCCGAGCTTCAAGGACCTCGCGC
TGGTCACCGGCGGACAGTTGCAGTTTGGCGATGCAGGCAGCGCCAAGGACGCCCAGGGCTATCCCACGGCCCTGGACAGC
AGCTTCATCCTGACCAAACAGCTGTGA

Upstream 100 bases:

>100_bases
CGGGTTGAAGTACCAAGCCCCGATCCTGTCTGATTGCGCAGTCCCGATTTATGGCCTAGCATGAATCGTCCCGTCAACAA
CTTCAAGCGGGGGGTTCATC

Downstream 100 bases:

>100_bases
ACAGAAGAGCCACGCGGCCGCCCCTGCCGCGTGAGCCGGGCAAAGCCTACACTTCGGTCATGCAGATTTACATGGTCGGT
GGTGCAGTGCGCGATGCCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MIRLAWLFSAASVAVLVAACGGGDGGTAALISSEPIDKYVGNWTNCQATVVSGVNVSALTSFTATKTDATRGSFTTTVTV
FAITSCTGLKLADPVPVPQLSGNVAIDSVGTGPSGSDKITITPSTLPSFKDLALVTGGQLQFGDAGSAKDAQGYPTALDS
SFILTKQL

Sequences:

>Translated_168_residues
MIRLAWLFSAASVAVLVAACGGGDGGTAALISSEPIDKYVGNWTNCQATVVSGVNVSALTSFTATKTDATRGSFTTTVTV
FAITSCTGLKLADPVPVPQLSGNVAIDSVGTGPSGSDKITITPSTLPSFKDLALVTGGQLQFGDAGSAKDAQGYPTALDS
SFILTKQL
>Mature_168_residues
MIRLAWLFSAASVAVLVAACGGGDGGTAALISSEPIDKYVGNWTNCQATVVSGVNVSALTSFTATKTDATRGSFTTTVTV
FAITSCTGLKLADPVPVPQLSGNVAIDSVGTGPSGSDKITITPSTLPSFKDLALVTGGQLQFGDAGSAKDAQGYPTALDS
SFILTKQL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16908; Mature: 16908

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRLAWLFSAASVAVLVAACGGGDGGTAALISSEPIDKYVGNWTNCQATVVSGVNVSALT
CEEEEEEHHHHCEEEEEEECCCCCCCEEEEEECCCHHHHHCCCCCCEEEEEECCCCHHHE
SFTATKTDATRGSFTTTVTVFAITSCTGLKLADPVPVPQLSGNVAIDSVGTGPSGSDKIT
EEECCCCCCCCCCEEEEEEEEEEECCCCCEECCCCCCCCCCCCEEEEECCCCCCCCCEEE
ITPSTLPSFKDLALVTGGQLQFGDAGSAKDAQGYPTALDSSFILTKQL
ECCCCCCCCCCEEEEECCEEEECCCCCCCCCCCCCCCCCCCEEEEECC
>Mature Secondary Structure
MIRLAWLFSAASVAVLVAACGGGDGGTAALISSEPIDKYVGNWTNCQATVVSGVNVSALT
CEEEEEEHHHHCEEEEEEECCCCCCCEEEEEECCCHHHHHCCCCCCEEEEEECCCCHHHE
SFTATKTDATRGSFTTTVTVFAITSCTGLKLADPVPVPQLSGNVAIDSVGTGPSGSDKIT
EEECCCCCCCCCCEEEEEEEEEEECCCCCEECCCCCCCCCCCCEEEEECCCCCCCCCEEE
ITPSTLPSFKDLALVTGGQLQFGDAGSAKDAQGYPTALDSSFILTKQL
ECCCCCCCCCCEEEEECCEEEECCCCCCCCCCCCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA