| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is 91789737
Identifier: 91789737
GI number: 91789737
Start: 4088886
End: 4089632
Strand: Reverse
Name: 91789737
Synonym: Bpro_3895
Alternate gene names: NA
Gene position: 4089632-4088886 (Counterclockwise)
Preceding gene: 91789738
Following gene: 91789736
Centisome position: 78.64
GC content: 62.52
Gene sequence:
>747_bases ATGAACCACCTTGCCCTGATTGCCAAGACACAGACCCTGATTGCCGCCGGCGACATCGTGGGCGCCGAGTCCGCACTGGT CGAACTGGCCGACACCGAGGGCGACGCTGCGCTGATGGTGGTGCTGGACTTGCTGCCGCCCAAAGACATCCTGGCGGTCA TCCGCGAATACGACAACTCGAAGGAATCGGTCATCAACCTGCTGGTCACGCCCGAGCAGTTCGCGCGCGCGGTGGTGATT GAAAAGCAGTACAAGGACCTGACCCGCACCCACCTGCGCGGCATGGTCAACTCGGTGATCTTCAGGGAAGACGCGGACCC GCTGGCGTTTTTGAATGCGATTGGCGACCTGGAGGGCGGCAGCGAAGCGCTGGCCGACTACTTCACTGAAAAGTGGAGCC GCGTCGAAGCCTTTGCCCGTACCGGCACCTTTGATGCCGTGGATGACACGGGTGAACTGCTGTCCAAGGCCGCCCTGCAG GCCTCGGCCTATGCGAAGCCGCGCGTCGAACAGGACGAAATTGCCGACCACGACTGGATGGAGCTCGCCTGGATTTTGCG CTACCAGTGCCCCGACCTTTTCATCGAGATGCTGACTGTGCTGCGCGCCAAGGCGCGTGCGCATGACCTGGGCGTCGAGG AGGAAGAAGACGCCGAAGAAGACGATGGCAAGGTCGAGACGGGTGATACCGACCGCGGCAAGGCCACGCCCGCTGCGCGC GAGTCAGACGAGGAATCGGCAATCTAA
Upstream 100 bases:
>100_bases AAAATCCGGCAGGAAGCCGGTGCCGACTGGCTGGTCGAGCAGGGCTTTGACCGCAAAGATTGATGGATGACCGACAGATT GGATTGGACGTGAAGCTTTT
Downstream 100 bases:
>100_bases AAGCGGCATGAGTCCGAAAGCCCATCTCTCCACGATGCCCACGCAACCCTCAGCCCCGCCAGCGTCCGGTTCTTCGGTCT CGCTCCATGATGCGCGCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MNHLALIAKTQTLIAAGDIVGAESALVELADTEGDAALMVVLDLLPPKDILAVIREYDNSKESVINLLVTPEQFARAVVI EKQYKDLTRTHLRGMVNSVIFREDADPLAFLNAIGDLEGGSEALADYFTEKWSRVEAFARTGTFDAVDDTGELLSKAALQ ASAYAKPRVEQDEIADHDWMELAWILRYQCPDLFIEMLTVLRAKARAHDLGVEEEEDAEEDDGKVETGDTDRGKATPAAR ESDEESAI
Sequences:
>Translated_248_residues MNHLALIAKTQTLIAAGDIVGAESALVELADTEGDAALMVVLDLLPPKDILAVIREYDNSKESVINLLVTPEQFARAVVI EKQYKDLTRTHLRGMVNSVIFREDADPLAFLNAIGDLEGGSEALADYFTEKWSRVEAFARTGTFDAVDDTGELLSKAALQ ASAYAKPRVEQDEIADHDWMELAWILRYQCPDLFIEMLTVLRAKARAHDLGVEEEEDAEEDDGKVETGDTDRGKATPAAR ESDEESAI >Mature_248_residues MNHLALIAKTQTLIAAGDIVGAESALVELADTEGDAALMVVLDLLPPKDILAVIREYDNSKESVINLLVTPEQFARAVVI EKQYKDLTRTHLRGMVNSVIFREDADPLAFLNAIGDLEGGSEALADYFTEKWSRVEAFARTGTFDAVDDTGELLSKAALQ ASAYAKPRVEQDEIADHDWMELAWILRYQCPDLFIEMLTVLRAKARAHDLGVEEEEDAEEDDGKVETGDTDRGKATPAAR ESDEESAI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27281; Mature: 27281
Theoretical pI: Translated: 4.08; Mature: 4.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHLALIAKTQTLIAAGDIVGAESALVELADTEGDAALMVVLDLLPPKDILAVIREYDNS CCCEEEEEHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEHHHHHHCCCHHHHHHHHHHCCC KESVINLLVTPEQFARAVVIEKQYKDLTRTHLRGMVNSVIFREDADPLAFLNAIGDLEGG HHHHHHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCC SEALADYFTEKWSRVEAFARTGTFDAVDDTGELLSKAALQASAYAKPRVEQDEIADHDWM HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHH ELAWILRYQCPDLFIEMLTVLRAKARAHDLGVEEEEDAEEDDGKVETGDTDRGKATPAAR HHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCC ESDEESAI CCCCCCCC >Mature Secondary Structure MNHLALIAKTQTLIAAGDIVGAESALVELADTEGDAALMVVLDLLPPKDILAVIREYDNS CCCEEEEEHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEHHHHHHCCCHHHHHHHHHHCCC KESVINLLVTPEQFARAVVIEKQYKDLTRTHLRGMVNSVIFREDADPLAFLNAIGDLEGG HHHHHHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCC SEALADYFTEKWSRVEAFARTGTFDAVDDTGELLSKAALQASAYAKPRVEQDEIADHDWM HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHH ELAWILRYQCPDLFIEMLTVLRAKARAHDLGVEEEEDAEEDDGKVETGDTDRGKATPAAR HHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCC ESDEESAI CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA