Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91789735

Identifier: 91789735

GI number: 91789735

Start: 4086395

End: 4087435

Strand: Direct

Name: 91789735

Synonym: Bpro_3893

Alternate gene names: NA

Gene position: 4086395-4087435 (Clockwise)

Preceding gene: 91789734

Following gene: 91789740

Centisome position: 78.58

GC content: 63.5

Gene sequence:

>1041_bases
ATGTTTTTTCTCTGGCCCCAATTTCTCTGGCTGCTGCTGGCCGTACCGCTGCTTGTGCTGCTGTACCTCTGGTTGCTGCG
CCGCAAGAAAAAACTGGCCGTGCGCTACGCATCACTGGCCATCATCAAGGAGGCCATGGGCCCGGGGCAAAGCATTCGCC
GCCATATCCCGCCCATCCTGTTTCTGCTGGCCATGGCGCTGATGCTGCTCGCCACGGCGCGACCGATGGCCGTGATCACG
CTGCCGTCAAACCAGCAGACCATCATGCTGGCCATAGATGTTTCAGGCAGCATGCGCGCGACCGACGTGCAGCCCAGCCG
CCTCGTGGCTGCGCAAACGGCCGCCAAGGCCTTCCTCACCGAACTGCCGCGCACGGTGAAGGTCGGCCTTGTCGCGTTTG
CCGGCTCTGCCCAGGTGGCGCAGATCCCGACGGTGAACCGCGAGGACCTGGTCTCCGCGATTGACCGCTTCCAGCTGCAG
CGCGGCACCGCCATCGGCAACGGCATCGTCATGTCGCTTGCCACGCTCTTTCCGGATGCCGGCATTGACCTGCAGTCCAT
GCAATCCGGGCGCGAGCGTCAGCGCGGCTTTGCCATTGACCAGGAGAAAAAGGAAGCGAAAGAATTCACGCCGGTGGCGC
CGGGCTCCTACAACTCGGCCGCGATCATCCTGCTGACGGACGGCCAGCGCACCACCGGCGTCGACTCGCTCGATGCCGCC
AAGCTGGCAGCCGACCGCGGCGTGCGCGTCTACACCGTGGGCATCGGTACCGTCGACGGCGAAACGATTGGCTTTGAAGG
CTGGTCCATGCGCGTCAGGCTCGATGAGGAAACCCTCAAGGGCATCGCGCGCGCCACGCAGGCCGAGTACTTTTATGCGG
GCACGGCGACTGACCTCAAAAAAGTCTATGAGACCCTGAGCTCACGCCTGACGGTGGAAAAAAAGGAGACCGAAGTCTCC
GCCCTGCTGGCACTGGCAGCCGCAGCGCTGGCGCTGCTCTCCGCCGGGCTGTCACTGCTGTGGTTTAACCGGATTCTTTA
A

Upstream 100 bases:

>100_bases
TGCGGCCGGCATGCATGCGGCATTGGGCAAGTTGCCCTCGCACCTGCGACAGGCCGCCTGAACTGCCTGAGTAGTACCCG
GTACCGCCCAAGGAACTTTC

Downstream 100 bases:

>100_bases
GGCGGCGGCCTGGCAGATGCGCTCAGGCACCGAGACAGCGAGACCACGAGACAGCGATAAGGATCGCTTCAACACCCATC
ACTGTTTCACATTGCACTCG

Product: von Willebrand factor, type A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 346; Mature: 346

Protein sequence:

>346_residues
MFFLWPQFLWLLLAVPLLVLLYLWLLRRKKKLAVRYASLAIIKEAMGPGQSIRRHIPPILFLLAMALMLLATARPMAVIT
LPSNQQTIMLAIDVSGSMRATDVQPSRLVAAQTAAKAFLTELPRTVKVGLVAFAGSAQVAQIPTVNREDLVSAIDRFQLQ
RGTAIGNGIVMSLATLFPDAGIDLQSMQSGRERQRGFAIDQEKKEAKEFTPVAPGSYNSAAIILLTDGQRTTGVDSLDAA
KLAADRGVRVYTVGIGTVDGETIGFEGWSMRVRLDEETLKGIARATQAEYFYAGTATDLKKVYETLSSRLTVEKKETEVS
ALLALAAAALALLSAGLSLLWFNRIL

Sequences:

>Translated_346_residues
MFFLWPQFLWLLLAVPLLVLLYLWLLRRKKKLAVRYASLAIIKEAMGPGQSIRRHIPPILFLLAMALMLLATARPMAVIT
LPSNQQTIMLAIDVSGSMRATDVQPSRLVAAQTAAKAFLTELPRTVKVGLVAFAGSAQVAQIPTVNREDLVSAIDRFQLQ
RGTAIGNGIVMSLATLFPDAGIDLQSMQSGRERQRGFAIDQEKKEAKEFTPVAPGSYNSAAIILLTDGQRTTGVDSLDAA
KLAADRGVRVYTVGIGTVDGETIGFEGWSMRVRLDEETLKGIARATQAEYFYAGTATDLKKVYETLSSRLTVEKKETEVS
ALLALAAAALALLSAGLSLLWFNRIL
>Mature_346_residues
MFFLWPQFLWLLLAVPLLVLLYLWLLRRKKKLAVRYASLAIIKEAMGPGQSIRRHIPPILFLLAMALMLLATARPMAVIT
LPSNQQTIMLAIDVSGSMRATDVQPSRLVAAQTAAKAFLTELPRTVKVGLVAFAGSAQVAQIPTVNREDLVSAIDRFQLQ
RGTAIGNGIVMSLATLFPDAGIDLQSMQSGRERQRGFAIDQEKKEAKEFTPVAPGSYNSAAIILLTDGQRTTGVDSLDAA
KLAADRGVRVYTVGIGTVDGETIGFEGWSMRVRLDEETLKGIARATQAEYFYAGTATDLKKVYETLSSRLTVEKKETEVS
ALLALAAAALALLSAGLSLLWFNRIL

Specific function: Unknown

COG id: COG2304

COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 VWFA domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022933
- InterPro:   IPR002035 [H]

Pfam domain/function: PF00092 VWA [H]

EC number: NA

Molecular weight: Translated: 37651; Mature: 37651

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: PS50234 VWFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFLWPQFLWLLLAVPLLVLLYLWLLRRKKKLAVRYASLAIIKEAMGPGQSIRRHIPPIL
CCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHH
FLLAMALMLLATARPMAVITLPSNQQTIMLAIDVSGSMRATDVQPSRLVAAQTAAKAFLT
HHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEECCCCCEECCCCHHHHHHHHHHHHHHHH
ELPRTVKVGLVAFAGSAQVAQIPTVNREDLVSAIDRFQLQRGTAIGNGIVMSLATLFPDA
HCCHHHEEEHEEECCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCC
GIDLQSMQSGRERQRGFAIDQEKKEAKEFTPVAPGSYNSAAIILLTDGQRTTGVDSLDAA
CCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHH
KLAADRGVRVYTVGIGTVDGETIGFEGWSMRVRLDEETLKGIARATQAEYFYAGTATDLK
HHHHCCCCEEEEEEEECCCCCEECCCCEEEEEEECHHHHHHHHHHHHCCEEEECCHHHHH
KVYETLSSRLTVEKKETEVSALLALAAAALALLSAGLSLLWFNRIL
HHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCC
>Mature Secondary Structure
MFFLWPQFLWLLLAVPLLVLLYLWLLRRKKKLAVRYASLAIIKEAMGPGQSIRRHIPPIL
CCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHH
FLLAMALMLLATARPMAVITLPSNQQTIMLAIDVSGSMRATDVQPSRLVAAQTAAKAFLT
HHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEECCCCCEECCCCHHHHHHHHHHHHHHHH
ELPRTVKVGLVAFAGSAQVAQIPTVNREDLVSAIDRFQLQRGTAIGNGIVMSLATLFPDA
HCCHHHEEEHEEECCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCC
GIDLQSMQSGRERQRGFAIDQEKKEAKEFTPVAPGSYNSAAIILLTDGQRTTGVDSLDAA
CCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHH
KLAADRGVRVYTVGIGTVDGETIGFEGWSMRVRLDEETLKGIARATQAEYFYAGTATDLK
HHHHCCCCEEEEEEEECCCCCEECCCCEEEEEEECHHHHHHHHHHHHCCEEEECCHHHHH
KVYETLSSRLTVEKKETEVSALLALAAAALALLSAGLSLLWFNRIL
HHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA