| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91789714
Identifier: 91789714
GI number: 91789714
Start: 4063660
End: 4064595
Strand: Direct
Name: 91789714
Synonym: Bpro_3872
Alternate gene names: NA
Gene position: 4063660-4064595 (Clockwise)
Preceding gene: 91789713
Following gene: 91789715
Centisome position: 78.14
GC content: 60.04
Gene sequence:
>936_bases ATGTTGAGCATACGCATTCAGGGGCAGAATACCGGCTCTATGAAGACCGAAAAATCCATAGCTGTCCAGATCATCGAGTT TATCCAGGCCGAAGGGCTGACGATTGGCGACCATCTGCCGGCACAACTGCTGGCCGACCGCTTGCGCGTGTCACGCTCCC CCATCAATGAAGCCCTGTGCCTGCTGCATGAAAAAGGCGTGCTGAGCCGCGAGCGCAACCGGGGCTACTTTCTGGCGAAA TCGGTCACCCAGCCCGTGGCCGACCTGGCCGAGCAGTGGGGACTGGACGAATCGGATGTCGTGACCACCGTTTACTTCAA GATAGCCGACGACCGGCTCAAGGGCCTGCTGTCCGATGAATTCTCGGAAAGTCTGATCAAGAACCGCTACGGCCTGACCG CGGCACAGCTTCAGGCCGTGCTCAGCCGCATTTCCCAGGAGGGCTGGGCAAACAGGAAACCCGGCTATGGCTGGGTCTTC TCGTCCATGCTGACCACGCCAGACAGCCTGCTGCAGTCCTACCGTCTCCGGCTGGCGCTGGAGCCGGCAGCCCTGCTGGA ACCGGGCTACCGGCTCGATCCGCAAGTGCTGGCGCGTTGCCGCGCCGCCGAACTGCACTTGCTGGAGGGCGGCATCGAAA CCGACACGGCGGACCAGCTGCATGAGCGCGGCGTTCGTTTCCATGAGTCGCTGGTGGAGGCCTCGGGCAACCCCTTCTTC ATCGACACGATACGCCGCGTCAACCGCGTGCGCCGTCTGCTGTCTTATCGCTCGATGCAAAACCGCAAACGCTATAAAGA ACACTGCCTTCAGCATCTGGGCGTGCTTGAACTTCTTGAAAAAGGCCGCAACGAAGAAGCCTCCGAGGCTTTGCGCAGTC ACTTGCTCAGCACCCTGAAAAATCTGGGAGAAATCAGTGACCTGCTCAAATCCTGA
Upstream 100 bases:
>100_bases TGCTGCGCGACGGCGGGGTCATACCCTCGATTTTGGGCAAGACGATCGCGGCGCAGGGTACCCGCGCCAAGGCCAGGGCG GCGGTAACGGCAACCAGCCC
Downstream 100 bases:
>100_bases GGCCGCTTTTCATTGTCAGCAGCTCATTTTCGCGTTACCCCCTTTTGACTTTTGAACGTATCAGGAACTCGCCATGAACA TTCCATCGCAGATCATCAAA
Product: GntR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator GntR Family; GntR-Family Transcriptional Regulator; Transcription Regulator; Transcription Regulator Protein; GntR Family Regulatory Protein; GntR Domain-Containing Protein; Transcriptional Regulator; FCD Domain Protein; Transcriptional Regulator Protein; Transcriptional Regulator Gntr
Number of amino acids: Translated: 311; Mature: 311
Protein sequence:
>311_residues MLSIRIQGQNTGSMKTEKSIAVQIIEFIQAEGLTIGDHLPAQLLADRLRVSRSPINEALCLLHEKGVLSRERNRGYFLAK SVTQPVADLAEQWGLDESDVVTTVYFKIADDRLKGLLSDEFSESLIKNRYGLTAAQLQAVLSRISQEGWANRKPGYGWVF SSMLTTPDSLLQSYRLRLALEPAALLEPGYRLDPQVLARCRAAELHLLEGGIETDTADQLHERGVRFHESLVEASGNPFF IDTIRRVNRVRRLLSYRSMQNRKRYKEHCLQHLGVLELLEKGRNEEASEALRSHLLSTLKNLGEISDLLKS
Sequences:
>Translated_311_residues MLSIRIQGQNTGSMKTEKSIAVQIIEFIQAEGLTIGDHLPAQLLADRLRVSRSPINEALCLLHEKGVLSRERNRGYFLAK SVTQPVADLAEQWGLDESDVVTTVYFKIADDRLKGLLSDEFSESLIKNRYGLTAAQLQAVLSRISQEGWANRKPGYGWVF SSMLTTPDSLLQSYRLRLALEPAALLEPGYRLDPQVLARCRAAELHLLEGGIETDTADQLHERGVRFHESLVEASGNPFF IDTIRRVNRVRRLLSYRSMQNRKRYKEHCLQHLGVLELLEKGRNEEASEALRSHLLSTLKNLGEISDLLKS >Mature_311_residues MLSIRIQGQNTGSMKTEKSIAVQIIEFIQAEGLTIGDHLPAQLLADRLRVSRSPINEALCLLHEKGVLSRERNRGYFLAK SVTQPVADLAEQWGLDESDVVTTVYFKIADDRLKGLLSDEFSESLIKNRYGLTAAQLQAVLSRISQEGWANRKPGYGWVF SSMLTTPDSLLQSYRLRLALEPAALLEPGYRLDPQVLARCRAAELHLLEGGIETDTADQLHERGVRFHESLVEASGNPFF IDTIRRVNRVRRLLSYRSMQNRKRYKEHCLQHLGVLELLEKGRNEEASEALRSHLLSTLKNLGEISDLLKS
Specific function: Unknown
COG id: COG1802
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35119; Mature: 35119
Theoretical pI: Translated: 8.10; Mature: 8.10
Prosite motif: PS50949 HTH_GNTR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSIRIQGQNTGSMKTEKSIAVQIIEFIQAEGLTIGDHLPAQLLADRLRVSRSPINEALC CEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHHH LLHEKGVLSRERNRGYFLAKSVTQPVADLAEQWGLDESDVVTTVYFKIADDRLKGLLSDE HHHHHCCHHHHCCCCEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH FSESLIKNRYGLTAAQLQAVLSRISQEGWANRKPGYGWVFSSMLTTPDSLLQSYRLRLAL HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHEE EPAALLEPGYRLDPQVLARCRAAELHLLEGGIETDTADQLHERGVRFHESLVEASGNPFF CCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCH IDTIRRVNRVRRLLSYRSMQNRKRYKEHCLQHLGVLELLEKGRNEEASEALRSHLLSTLK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH NLGEISDLLKS HHHHHHHHHCC >Mature Secondary Structure MLSIRIQGQNTGSMKTEKSIAVQIIEFIQAEGLTIGDHLPAQLLADRLRVSRSPINEALC CEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHHH LLHEKGVLSRERNRGYFLAKSVTQPVADLAEQWGLDESDVVTTVYFKIADDRLKGLLSDE HHHHHCCHHHHCCCCEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH FSESLIKNRYGLTAAQLQAVLSRISQEGWANRKPGYGWVFSSMLTTPDSLLQSYRLRLAL HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHEE EPAALLEPGYRLDPQVLARCRAAELHLLEGGIETDTADQLHERGVRFHESLVEASGNPFF CCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCH IDTIRRVNRVRRLLSYRSMQNRKRYKEHCLQHLGVLELLEKGRNEEASEALRSHLLSTLK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH NLGEISDLLKS HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA