Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91789714

Identifier: 91789714

GI number: 91789714

Start: 4063660

End: 4064595

Strand: Direct

Name: 91789714

Synonym: Bpro_3872

Alternate gene names: NA

Gene position: 4063660-4064595 (Clockwise)

Preceding gene: 91789713

Following gene: 91789715

Centisome position: 78.14

GC content: 60.04

Gene sequence:

>936_bases
ATGTTGAGCATACGCATTCAGGGGCAGAATACCGGCTCTATGAAGACCGAAAAATCCATAGCTGTCCAGATCATCGAGTT
TATCCAGGCCGAAGGGCTGACGATTGGCGACCATCTGCCGGCACAACTGCTGGCCGACCGCTTGCGCGTGTCACGCTCCC
CCATCAATGAAGCCCTGTGCCTGCTGCATGAAAAAGGCGTGCTGAGCCGCGAGCGCAACCGGGGCTACTTTCTGGCGAAA
TCGGTCACCCAGCCCGTGGCCGACCTGGCCGAGCAGTGGGGACTGGACGAATCGGATGTCGTGACCACCGTTTACTTCAA
GATAGCCGACGACCGGCTCAAGGGCCTGCTGTCCGATGAATTCTCGGAAAGTCTGATCAAGAACCGCTACGGCCTGACCG
CGGCACAGCTTCAGGCCGTGCTCAGCCGCATTTCCCAGGAGGGCTGGGCAAACAGGAAACCCGGCTATGGCTGGGTCTTC
TCGTCCATGCTGACCACGCCAGACAGCCTGCTGCAGTCCTACCGTCTCCGGCTGGCGCTGGAGCCGGCAGCCCTGCTGGA
ACCGGGCTACCGGCTCGATCCGCAAGTGCTGGCGCGTTGCCGCGCCGCCGAACTGCACTTGCTGGAGGGCGGCATCGAAA
CCGACACGGCGGACCAGCTGCATGAGCGCGGCGTTCGTTTCCATGAGTCGCTGGTGGAGGCCTCGGGCAACCCCTTCTTC
ATCGACACGATACGCCGCGTCAACCGCGTGCGCCGTCTGCTGTCTTATCGCTCGATGCAAAACCGCAAACGCTATAAAGA
ACACTGCCTTCAGCATCTGGGCGTGCTTGAACTTCTTGAAAAAGGCCGCAACGAAGAAGCCTCCGAGGCTTTGCGCAGTC
ACTTGCTCAGCACCCTGAAAAATCTGGGAGAAATCAGTGACCTGCTCAAATCCTGA

Upstream 100 bases:

>100_bases
TGCTGCGCGACGGCGGGGTCATACCCTCGATTTTGGGCAAGACGATCGCGGCGCAGGGTACCCGCGCCAAGGCCAGGGCG
GCGGTAACGGCAACCAGCCC

Downstream 100 bases:

>100_bases
GGCCGCTTTTCATTGTCAGCAGCTCATTTTCGCGTTACCCCCTTTTGACTTTTGAACGTATCAGGAACTCGCCATGAACA
TTCCATCGCAGATCATCAAA

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator GntR Family; GntR-Family Transcriptional Regulator; Transcription Regulator; Transcription Regulator Protein; GntR Family Regulatory Protein; GntR Domain-Containing Protein; Transcriptional Regulator; FCD Domain Protein; Transcriptional Regulator Protein; Transcriptional Regulator Gntr

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MLSIRIQGQNTGSMKTEKSIAVQIIEFIQAEGLTIGDHLPAQLLADRLRVSRSPINEALCLLHEKGVLSRERNRGYFLAK
SVTQPVADLAEQWGLDESDVVTTVYFKIADDRLKGLLSDEFSESLIKNRYGLTAAQLQAVLSRISQEGWANRKPGYGWVF
SSMLTTPDSLLQSYRLRLALEPAALLEPGYRLDPQVLARCRAAELHLLEGGIETDTADQLHERGVRFHESLVEASGNPFF
IDTIRRVNRVRRLLSYRSMQNRKRYKEHCLQHLGVLELLEKGRNEEASEALRSHLLSTLKNLGEISDLLKS

Sequences:

>Translated_311_residues
MLSIRIQGQNTGSMKTEKSIAVQIIEFIQAEGLTIGDHLPAQLLADRLRVSRSPINEALCLLHEKGVLSRERNRGYFLAK
SVTQPVADLAEQWGLDESDVVTTVYFKIADDRLKGLLSDEFSESLIKNRYGLTAAQLQAVLSRISQEGWANRKPGYGWVF
SSMLTTPDSLLQSYRLRLALEPAALLEPGYRLDPQVLARCRAAELHLLEGGIETDTADQLHERGVRFHESLVEASGNPFF
IDTIRRVNRVRRLLSYRSMQNRKRYKEHCLQHLGVLELLEKGRNEEASEALRSHLLSTLKNLGEISDLLKS
>Mature_311_residues
MLSIRIQGQNTGSMKTEKSIAVQIIEFIQAEGLTIGDHLPAQLLADRLRVSRSPINEALCLLHEKGVLSRERNRGYFLAK
SVTQPVADLAEQWGLDESDVVTTVYFKIADDRLKGLLSDEFSESLIKNRYGLTAAQLQAVLSRISQEGWANRKPGYGWVF
SSMLTTPDSLLQSYRLRLALEPAALLEPGYRLDPQVLARCRAAELHLLEGGIETDTADQLHERGVRFHESLVEASGNPFF
IDTIRRVNRVRRLLSYRSMQNRKRYKEHCLQHLGVLELLEKGRNEEASEALRSHLLSTLKNLGEISDLLKS

Specific function: Unknown

COG id: COG1802

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35119; Mature: 35119

Theoretical pI: Translated: 8.10; Mature: 8.10

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSIRIQGQNTGSMKTEKSIAVQIIEFIQAEGLTIGDHLPAQLLADRLRVSRSPINEALC
CEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHHH
LLHEKGVLSRERNRGYFLAKSVTQPVADLAEQWGLDESDVVTTVYFKIADDRLKGLLSDE
HHHHHCCHHHHCCCCEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
FSESLIKNRYGLTAAQLQAVLSRISQEGWANRKPGYGWVFSSMLTTPDSLLQSYRLRLAL
HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHEE
EPAALLEPGYRLDPQVLARCRAAELHLLEGGIETDTADQLHERGVRFHESLVEASGNPFF
CCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCH
IDTIRRVNRVRRLLSYRSMQNRKRYKEHCLQHLGVLELLEKGRNEEASEALRSHLLSTLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
NLGEISDLLKS
HHHHHHHHHCC
>Mature Secondary Structure
MLSIRIQGQNTGSMKTEKSIAVQIIEFIQAEGLTIGDHLPAQLLADRLRVSRSPINEALC
CEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHHH
LLHEKGVLSRERNRGYFLAKSVTQPVADLAEQWGLDESDVVTTVYFKIADDRLKGLLSDE
HHHHHCCHHHHCCCCEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
FSESLIKNRYGLTAAQLQAVLSRISQEGWANRKPGYGWVFSSMLTTPDSLLQSYRLRLAL
HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHEE
EPAALLEPGYRLDPQVLARCRAAELHLLEGGIETDTADQLHERGVRFHESLVEASGNPFF
CCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCH
IDTIRRVNRVRRLLSYRSMQNRKRYKEHCLQHLGVLELLEKGRNEEASEALRSHLLSTLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
NLGEISDLLKS
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA