The gene/protein map for NC_007948 is currently unavailable.
Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91789703

Identifier: 91789703

GI number: 91789703

Start: 4051570

End: 4052682

Strand: Reverse

Name: 91789703

Synonym: Bpro_3859

Alternate gene names: NA

Gene position: 4052682-4051570 (Counterclockwise)

Preceding gene: 91789704

Following gene: 91789697

Centisome position: 77.93

GC content: 64.87

Gene sequence:

>1113_bases
ATGGACATATCAGCAATCACTCTGTTCCTGGCGGGTGATGTCATGTGCGGCCGCGGCATCGACCAAATCCTGCCTCATCC
AGTCCACCCGCAATTGTTCGAGTCCTTCGTCAAGTCCGCGCGCGATTACGTCGAGCTGGCGGAAGGCCAAAGTGGCCCCA
TCCCTCGTCCGGTGGGCTGGGACTATGTCTGGGGCGATGCCCTGGCCGAGCTGAACCGCCTGCAGCCGCACGCGCGCATC
GTCAACCTGGAGACCGCCGTCACGGCGCGAGGGGAGCCCTGGCCGGCCAAGGGCATTCACTACCGCATGCATCCCGCCAA
TGTGCCCTGTCTGACGGCTGCCGGCCTGGACTGTTGTGTACTGGCCAATAACCACGTCCTGGATTGGGGCTACGACGGCC
TGAGCGACACCCTGGCCACACTCCGTCGTGCCGGGCTGCGTACCACCGGCGCGGGACTCAACCAGGCCGAGGCTGAGGCG
CCGGCCTGCATCGAGGTGCCCGGCAAAGGGCGGGTCCTCGTGCTTGCCATGGCCAGCGACAGCAGCGGCGTCCCCCCTTC
CTGGGAGGCCACGGCAGAGCGCGCGGGCGTCTCGCGTGCACCCGACTTCTCGGCACAGGCGGCGCAGGCGCTGGCCGCCA
GAGCGGCTGCAGCGCGGCGAGAGGGTGACATCGTGGTTGTGTCGCTTCATTGGGGCGGCAACTGGGGGTTTCAGGTGCCC
GCCGAGCAGCGCAGCTTTGCCAGGCGTCTGATTGATTCTGGTGCCGTAGATGTCATCTTCGGCCACTCCTCCCACCATGT
GAAGGGCATCGAGGTGTACTGCGAACGCCTGATCCTGTATGGCTGCGGCGACCTTCTGAACGATTATGAAGGGATTGGCG
GTTACGACAGCTACTGCCCGGGTCTGGGGCTGATGTATTTTGCGAGTCTCGATGCGCAGACACGTCGCCTCGTGAATCTG
ACCATGGTTCCCATACGGGTCCAGCGTTTTCAGATCCAGCGGGCGACCGACGACGAGACGGCGTGGCTGCTGGCGACTTT
GAGTCGGGAGGGGCAGCGATTCGGGACAGGCGTGGAGCAGCGCAACGCAGATCTGCTGTTACGCTGGACCTAG

Upstream 100 bases:

>100_bases
TTGCATGACGGGGAAGAATGTGCTGGCGGATGGCGGGGCCTATCCAGGAACGTACTGACGGGCAGTTGACGCGCGCTGCG
CGTCGGCGGACCATGGGTGG

Downstream 100 bases:

>100_bases
CCGGTGCCGAGCCGCCTCAAACCGGCGACGCGTCCCCTCGGGGGCCGGGCGCAGCCCTTGGGGGCCATAAAAACCTGGCC
CGCAGCGTCGCCGTCACTTT

Product: putative capsule biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 370; Mature: 370

Protein sequence:

>370_residues
MDISAITLFLAGDVMCGRGIDQILPHPVHPQLFESFVKSARDYVELAEGQSGPIPRPVGWDYVWGDALAELNRLQPHARI
VNLETAVTARGEPWPAKGIHYRMHPANVPCLTAAGLDCCVLANNHVLDWGYDGLSDTLATLRRAGLRTTGAGLNQAEAEA
PACIEVPGKGRVLVLAMASDSSGVPPSWEATAERAGVSRAPDFSAQAAQALAARAAAARREGDIVVVSLHWGGNWGFQVP
AEQRSFARRLIDSGAVDVIFGHSSHHVKGIEVYCERLILYGCGDLLNDYEGIGGYDSYCPGLGLMYFASLDAQTRRLVNL
TMVPIRVQRFQIQRATDDETAWLLATLSREGQRFGTGVEQRNADLLLRWT

Sequences:

>Translated_370_residues
MDISAITLFLAGDVMCGRGIDQILPHPVHPQLFESFVKSARDYVELAEGQSGPIPRPVGWDYVWGDALAELNRLQPHARI
VNLETAVTARGEPWPAKGIHYRMHPANVPCLTAAGLDCCVLANNHVLDWGYDGLSDTLATLRRAGLRTTGAGLNQAEAEA
PACIEVPGKGRVLVLAMASDSSGVPPSWEATAERAGVSRAPDFSAQAAQALAARAAAARREGDIVVVSLHWGGNWGFQVP
AEQRSFARRLIDSGAVDVIFGHSSHHVKGIEVYCERLILYGCGDLLNDYEGIGGYDSYCPGLGLMYFASLDAQTRRLVNL
TMVPIRVQRFQIQRATDDETAWLLATLSREGQRFGTGVEQRNADLLLRWT
>Mature_370_residues
MDISAITLFLAGDVMCGRGIDQILPHPVHPQLFESFVKSARDYVELAEGQSGPIPRPVGWDYVWGDALAELNRLQPHARI
VNLETAVTARGEPWPAKGIHYRMHPANVPCLTAAGLDCCVLANNHVLDWGYDGLSDTLATLRRAGLRTTGAGLNQAEAEA
PACIEVPGKGRVLVLAMASDSSGVPPSWEATAERAGVSRAPDFSAQAAQALAARAAAARREGDIVVVSLHWGGNWGFQVP
AEQRSFARRLIDSGAVDVIFGHSSHHVKGIEVYCERLILYGCGDLLNDYEGIGGYDSYCPGLGLMYFASLDAQTRRLVNL
TMVPIRVQRFQIQRATDDETAWLLATLSREGQRFGTGVEQRNADLLLRWT

Specific function: Could be involved in the biosynthesis of a cell wall component (Potential) [H]

COG id: COG2843

COG function: function code M; Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CapA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019079 [H]

Pfam domain/function: PF09587 PGA_cap [H]

EC number: NA

Molecular weight: Translated: 40199; Mature: 40199

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDISAITLFLAGDVMCGRGIDQILPHPVHPQLFESFVKSARDYVELAEGQSGPIPRPVGW
CCCCEEEEEEECCCHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
DYVWGDALAELNRLQPHARIVNLETAVTARGEPWPAKGIHYRMHPANVPCLTAAGLDCCV
CCHHHHHHHHHHHCCCCCEEEEEEHEEEECCCCCCCCCEEEEECCCCCCEEECCCCCEEE
LANNHVLDWGYDGLSDTLATLRRAGLRTTGAGLNQAEAEAPACIEVPGKGRVLVLAMASD
EECCEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCHHCCCCCEEEECCCCCEEEEEEECC
SSGVPPSWEATAERAGVSRAPDFSAQAAQALAARAAAARREGDIVVVSLHWGGNWGFQVP
CCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCEECC
AEQRSFARRLIDSGAVDVIFGHSSHHVKGIEVYCERLILYGCGDLLNDYEGIGGYDSYCP
HHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
GLGLMYFASLDAQTRRLVNLTMVPIRVQRFQIQRATDDETAWLLATLSREGQRFGTGVEQ
CCHHHHHHHCCHHHHHEEEEEEEEEEEEEEEEECCCCCCHHHHHHHHHHCCHHHCCCCCC
RNADLLLRWT
CCCCEEEEEC
>Mature Secondary Structure
MDISAITLFLAGDVMCGRGIDQILPHPVHPQLFESFVKSARDYVELAEGQSGPIPRPVGW
CCCCEEEEEEECCCHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
DYVWGDALAELNRLQPHARIVNLETAVTARGEPWPAKGIHYRMHPANVPCLTAAGLDCCV
CCHHHHHHHHHHHCCCCCEEEEEEHEEEECCCCCCCCCEEEEECCCCCCEEECCCCCEEE
LANNHVLDWGYDGLSDTLATLRRAGLRTTGAGLNQAEAEAPACIEVPGKGRVLVLAMASD
EECCEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCHHCCCCCEEEECCCCCEEEEEEECC
SSGVPPSWEATAERAGVSRAPDFSAQAAQALAARAAAARREGDIVVVSLHWGGNWGFQVP
CCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCEECC
AEQRSFARRLIDSGAVDVIFGHSSHHVKGIEVYCERLILYGCGDLLNDYEGIGGYDSYCP
HHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
GLGLMYFASLDAQTRRLVNLTMVPIRVQRFQIQRATDDETAWLLATLSREGQRFGTGVEQ
CCHHHHHHHCCHHHHHEEEEEEEEEEEEEEEEECCCCCCHHHHHHHHHHCCHHHCCCCCC
RNADLLLRWT
CCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]