| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91789701
Identifier: 91789701
GI number: 91789701
Start: 4049422
End: 4050366
Strand: Direct
Name: 91789701
Synonym: Bpro_3857
Alternate gene names: NA
Gene position: 4049422-4050366 (Clockwise)
Preceding gene: 91789700
Following gene: 91789702
Centisome position: 77.87
GC content: 56.08
Gene sequence:
>945_bases ATGACAGCCGCAACCTCTGCCAATCCGACTGCGTGGCGCACCACCGATCCCGGTCTGCCTGACCGCTTGCTTGAAGGCGC AATTGACCTGCACTGCCACAGTGGTCCATCGGTCATGCCGCGTTACTTTGACCACTACGATGCCATGCAGGAGGCCTCTT CTGTCGGTATGCGGGCCCTGCTCATCAAGGACCACTACTACTCGGCCACGCCCGTGACCGAAGTGCTCAACAAGCACTTT TCCCACCTGAAAGTGACCTTGTTGTCTGGCGTACCGTTGAACAACACCACTGGCGGGCTCAACATGTATGCCGTGGAGCA CGGCATCAAGCTCGGGGCAAAGCTGGTCTGGATGCCGACTTTTTCAGCCAAGAACCACCTGGATCACCACAAGCAGGACG AGCACTTCAAGGACAAGTTCCCCCAGACCAAAAAGGTCATGATCGAACCTACGCCACTGACTGTCACAAACGGGGCTGGC AAGCTGCGGCCCGAGGTCATGCCGATTCTGGATCTGATTGCGGAAAGTGACATTGTTCTTTCCTCCGGACATCTGCACAT CAGCGAAATTTGGCCCCTGTTTGAAGAGGCCAAGCGGCGTGGGGTCAAGCGTCTCCTGTGTAATCACCCAACCTATGTGG TGGACGCCTCGCTCGACGACATTCGCGAGCTGGTGGGCATGGGCGCCTATATGGAACACTCCATGTGCATGTTCGTTCCA GGCTCCAAGTTCAAGTTCTACGATCCACCCGAGTTGCAGGCCATGATCACCGCAGGCACGGTGGATCACACGATTCTCGG CTCTGATCTGGGGCAGATCGGAAACCCTCGGCTCGTGGACGGCTTCAAAAACGTCATTGAAACCTGTCTCGATCTGGGAT ACAGCGAAGCCGACGTGCGGAAAATGGTGTCTACCAATGCAGCTGATCTAATCGGACTGAAATAA
Upstream 100 bases:
>100_bases GCTCAACCTGGACGTGTTCGCTCCCATCCGTGATGACTACAAGCACCTGGTGGAGTACCAGGCTGCCGATTTTTCTGACA AACCCTGAGGAGAACCGAAC
Downstream 100 bases:
>100_bases ATGCATTTACCGGGAAGGGTACTGCCGTGACCTTGGAAAAAGAAACCGCGAACTCGCTCGATTCCGTAGCGGTGGTAGCC CAATTGCTGGATGAATTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 314; Mature: 313
Protein sequence:
>314_residues MTAATSANPTAWRTTDPGLPDRLLEGAIDLHCHSGPSVMPRYFDHYDAMQEASSVGMRALLIKDHYYSATPVTEVLNKHF SHLKVTLLSGVPLNNTTGGLNMYAVEHGIKLGAKLVWMPTFSAKNHLDHHKQDEHFKDKFPQTKKVMIEPTPLTVTNGAG KLRPEVMPILDLIAESDIVLSSGHLHISEIWPLFEEAKRRGVKRLLCNHPTYVVDASLDDIRELVGMGAYMEHSMCMFVP GSKFKFYDPPELQAMITAGTVDHTILGSDLGQIGNPRLVDGFKNVIETCLDLGYSEADVRKMVSTNAADLIGLK
Sequences:
>Translated_314_residues MTAATSANPTAWRTTDPGLPDRLLEGAIDLHCHSGPSVMPRYFDHYDAMQEASSVGMRALLIKDHYYSATPVTEVLNKHF SHLKVTLLSGVPLNNTTGGLNMYAVEHGIKLGAKLVWMPTFSAKNHLDHHKQDEHFKDKFPQTKKVMIEPTPLTVTNGAG KLRPEVMPILDLIAESDIVLSSGHLHISEIWPLFEEAKRRGVKRLLCNHPTYVVDASLDDIRELVGMGAYMEHSMCMFVP GSKFKFYDPPELQAMITAGTVDHTILGSDLGQIGNPRLVDGFKNVIETCLDLGYSEADVRKMVSTNAADLIGLK >Mature_313_residues TAATSANPTAWRTTDPGLPDRLLEGAIDLHCHSGPSVMPRYFDHYDAMQEASSVGMRALLIKDHYYSATPVTEVLNKHFS HLKVTLLSGVPLNNTTGGLNMYAVEHGIKLGAKLVWMPTFSAKNHLDHHKQDEHFKDKFPQTKKVMIEPTPLTVTNGAGK LRPEVMPILDLIAESDIVLSSGHLHISEIWPLFEEAKRRGVKRLLCNHPTYVVDASLDDIRELVGMGAYMEHSMCMFVPG SKFKFYDPPELQAMITAGTVDHTILGSDLGQIGNPRLVDGFKNVIETCLDLGYSEADVRKMVSTNAADLIGLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34717; Mature: 34586
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAATSANPTAWRTTDPGLPDRLLEGAIDLHCHSGPSVMPRYFDHYDAMQEASSVGMRAL CCCCCCCCCCCCCCCCCCCHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCEEEE LIKDHYYSATPVTEVLNKHFSHLKVTLLSGVPLNNTTGGLNMYAVEHGIKLGAKLVWMPT EEECCCCCCCCHHHHHHHHHHHEEEEEECCCCCCCCCCCEEEEEEHHCHHCCCEEEEEEC FSAKNHLDHHKQDEHFKDKFPQTKKVMIEPTPLTVTNGAGKLRPEVMPILDLIAESDIVL CCCHHHHHCCCCHHHHHHHCCCCCEEEECCCCEEEECCCCCCCHHHHHHHHHHHCCCEEE SSGHLHISEIWPLFEEAKRRGVKRLLCNHPTYVVDASLDDIRELVGMGAYMEHSMCMFVP ECCCEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHCCCHHHHCCEEEEEC GSKFKFYDPPELQAMITAGTVDHTILGSDLGQIGNPRLVDGFKNVIETCLDLGYSEADVR CCCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHH KMVSTNAADLIGLK HHHHCCCHHHCCCC >Mature Secondary Structure TAATSANPTAWRTTDPGLPDRLLEGAIDLHCHSGPSVMPRYFDHYDAMQEASSVGMRAL CCCCCCCCCCCCCCCCCCHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCEEEE LIKDHYYSATPVTEVLNKHFSHLKVTLLSGVPLNNTTGGLNMYAVEHGIKLGAKLVWMPT EEECCCCCCCCHHHHHHHHHHHEEEEEECCCCCCCCCCCEEEEEEHHCHHCCCEEEEEEC FSAKNHLDHHKQDEHFKDKFPQTKKVMIEPTPLTVTNGAGKLRPEVMPILDLIAESDIVL CCCHHHHHCCCCHHHHHHHCCCCCEEEECCCCEEEECCCCCCCHHHHHHHHHHHCCCEEE SSGHLHISEIWPLFEEAKRRGVKRLLCNHPTYVVDASLDDIRELVGMGAYMEHSMCMFVP ECCCEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHCCCHHHHCCEEEEEC GSKFKFYDPPELQAMITAGTVDHTILGSDLGQIGNPRLVDGFKNVIETCLDLGYSEADVR CCCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHH KMVSTNAADLIGLK HHHHCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA