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The map label for this gene is bkdR [H]

Identifier: 91789674

GI number: 91789674

Start: 4018835

End: 4019311

Strand: Reverse

Name: bkdR [H]

Synonym: Bpro_3830

Alternate gene names: 91789674

Gene position: 4019311-4018835 (Counterclockwise)

Preceding gene: 91789676

Following gene: 91789672

Centisome position: 77.29

GC content: 59.96

Gene sequence:

>477_bases
ATGCAGCTTGATAACCTTGATTTGAAGATTCTTGACGAGCTTCAGCGCGATGGCTCGCTGTCCAATGTGGAGCTGGCCCG
GCGCGTGCATTTAAGTCCGTCGCCGTGTCTGGCCCGCGTCAAGGCGCTGGAGGCCGCCCGGGTCATTGACCGCTATGTGG
CCATTGCCAATGCGCAGGCGCTGGGACTGGGGCTGAGTGTGTTCATCTCCATCAGCCTGCGCTCGCAAAACAAGGAGGCG
CTGGGCGAGTTTGAGCGGCGCATTGCCGAGCATGACGAAGTGATGGAGTGCTATTTGATGACTGGCGACAGCGACTATCT
GATCCGCGTGGCGGTCGCCGACATCGGGGCGCTGGAGAAATTCATTCTGGAGCAGCTCACGCCGATTCCCGGCATCGAAA
AAATCCGCTCCAGTTTTGCGCTCAAGCAGGTGCGCTATAAGACGGCGTTGCCGTTGCCGCGGGTTGCGGCCGCATAG

Upstream 100 bases:

>100_bases
ATCCACTGTACGCATCTTCCCGCAAAAGGTGTTGCCTAAATATGGGGATAAATGCGTAACTGGCGGCATAAAATTCTGCA
ATTGACTAAATTTACAGACT

Downstream 100 bases:

>100_bases
TTCGCGGTCTGATTGTGGATTTGGGTTTTGTTGGCTTTGCTGGGGTTGGAGGCCGGGACTCGCCCCGGCGGGCGACTCAC
TTTCTTTTGCTTACTTTTCT

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MQLDNLDLKILDELQRDGSLSNVELARRVHLSPSPCLARVKALEAARVIDRYVAIANAQALGLGLSVFISISLRSQNKEA
LGEFERRIAEHDEVMECYLMTGDSDYLIRVAVADIGALEKFILEQLTPIPGIEKIRSSFALKQVRYKTALPLPRVAAA

Sequences:

>Translated_158_residues
MQLDNLDLKILDELQRDGSLSNVELARRVHLSPSPCLARVKALEAARVIDRYVAIANAQALGLGLSVFISISLRSQNKEA
LGEFERRIAEHDEVMECYLMTGDSDYLIRVAVADIGALEKFILEQLTPIPGIEKIRSSFALKQVRYKTALPLPRVAAA
>Mature_158_residues
MQLDNLDLKILDELQRDGSLSNVELARRVHLSPSPCLARVKALEAARVIDRYVAIANAQALGLGLSVFISISLRSQNKEA
LGEFERRIAEHDEVMECYLMTGDSDYLIRVAVADIGALEKFILEQLTPIPGIEKIRSSFALKQVRYKTALPLPRVAAA

Specific function: Positive regulator of the bkd operon for branched-chain keto acid dehydrogenase complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787116, Length=148, Percent_Identity=39.1891891891892, Blast_Score=118, Evalue=1e-28,
Organism=Escherichia coli, GI87081742, Length=150, Percent_Identity=36.6666666666667, Blast_Score=108, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 17517; Mature: 17517

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLDNLDLKILDELQRDGSLSNVELARRVHLSPSPCLARVKALEAARVIDRYVAIANAQA
CCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHH
LGLGLSVFISISLRSQNKEALGEFERRIAEHDEVMECYLMTGDSDYLIRVAVADIGALEK
HHCCEEHEEEEEECCCCHHHHHHHHHHHHHHHHHHEEHEEECCCCEEEEEHHHHHHHHHH
FILEQLTPIPGIEKIRSSFALKQVRYKTALPLPRVAAA
HHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHCCC
>Mature Secondary Structure
MQLDNLDLKILDELQRDGSLSNVELARRVHLSPSPCLARVKALEAARVIDRYVAIANAQA
CCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHH
LGLGLSVFISISLRSQNKEALGEFERRIAEHDEVMECYLMTGDSDYLIRVAVADIGALEK
HHCCEEHEEEEEECCCCHHHHHHHHHHHHHHHHHHEEHEEECCCCEEEEEHHHHHHHHHH
FILEQLTPIPGIEKIRSSFALKQVRYKTALPLPRVAAA
HHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8320210 [H]