| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91789671
Identifier: 91789671
GI number: 91789671
Start: 4015667
End: 4016659
Strand: Reverse
Name: 91789671
Synonym: Bpro_3827
Alternate gene names: NA
Gene position: 4016659-4015667 (Counterclockwise)
Preceding gene: 91789672
Following gene: 91789670
Centisome position: 77.24
GC content: 66.26
Gene sequence:
>993_bases ATGAAACTGAAACTCGTAAACCTGGCGACAAACCTGGCTATCGTCGCGGCAGTCCTGGCCGGGCTGGTGCCATGGAGCGG CGCCCGCGCACAAAGCTATCCGTCGAAGCCGATCCAGCTGGTCATTCCCTTTCCACCTGGCGGGGCGACCGACATCGTCG GCCGGCTTGTCGGCAAAAAGCTGGGCGAGCACCTCGGCCAGCCTGTGGTGATCGAGAACAAGGCCGGTGCCGGCACCGTC GTCGGCGCCGCCTTTGTCGCCAAGGCACCGGCCGATGGTTACACGCTGCTGATCAGCTCGGGTTCCACCTTCACCGTGAA CCCTGCGCTCAACCCCAGGCTGCCCTATGACCCGGTCAAGAGCTTCGAGCCCATCGGCCTTGCCGCGCGCGTTCCTCTGA TCCTGATTGCCAACCGCGAGGTGCCGGTCAACAACCTGATGCAACTGGTAGCCGCCGTGCGCGGCACGCCGGACAAGTAC GTCTACGGTTCCTTTGGCAGCGGCACGACGGGCCACTTCGCGGGTGAGCTGATGTGGAGCGCCATCGGCATCAAGCTGCT GCACGTGCCCTACAAGGGCAGCGCGCCGGCCATGAGCGACCTGATCGGCGGCCAGATCCCATTCACGGTCGACACCGTGG CAGCGTCGCTGCCTCAGCTGAAAGCGGGCAAGATCAAGGCCATCGCCGTCACGGGTGCCACGCGCACCACGCAGCTACCC GACGTGCCGACGGTGGCGGAAAGCGGCTTCCCGGGTTTTTCCGCCGACTCCTGGCTGGCGGTCGTCGCGCCGCGCGGTCT GCCAGTCGATGCGAAGGCCAGGCTGCAAAAAGCACTGGCCGAAACCATGGCCGACGCCGAGATCCGCGACAAGCTCATTG CCAACGGGCTGCAGCCCGCGTACGAGTCCGCTGCCGCCGTGGCTGCGCGAATCGAAGACGAGCTGCCGCGCATGCGCGCC GTGGCGCAACGCGCGAACATCCGGGCGGAATGA
Upstream 100 bases:
>100_bases GAGACGTGCTCATCCTGGAGCGAGGATTCGCTGTTGCAGCGAGGCCTTTGCACATGCCAACCGCGGCCCTCGGGCCGCCA TTGAAACGGTGGACAACATG
Downstream 100 bases:
>100_bases GGAACGAATATGGCAACCGATGACAGCCTGGTCGTCCTGTCCGCCGTCGAATTGAGGCGGCTGATCGAGGCCAAACAGAT CTCGCCGGTCGAGCTGCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 330; Mature: 330
Protein sequence:
>330_residues MKLKLVNLATNLAIVAAVLAGLVPWSGARAQSYPSKPIQLVIPFPPGGATDIVGRLVGKKLGEHLGQPVVIENKAGAGTV VGAAFVAKAPADGYTLLISSGSTFTVNPALNPRLPYDPVKSFEPIGLAARVPLILIANREVPVNNLMQLVAAVRGTPDKY VYGSFGSGTTGHFAGELMWSAIGIKLLHVPYKGSAPAMSDLIGGQIPFTVDTVAASLPQLKAGKIKAIAVTGATRTTQLP DVPTVAESGFPGFSADSWLAVVAPRGLPVDAKARLQKALAETMADAEIRDKLIANGLQPAYESAAAVAARIEDELPRMRA VAQRANIRAE
Sequences:
>Translated_330_residues MKLKLVNLATNLAIVAAVLAGLVPWSGARAQSYPSKPIQLVIPFPPGGATDIVGRLVGKKLGEHLGQPVVIENKAGAGTV VGAAFVAKAPADGYTLLISSGSTFTVNPALNPRLPYDPVKSFEPIGLAARVPLILIANREVPVNNLMQLVAAVRGTPDKY VYGSFGSGTTGHFAGELMWSAIGIKLLHVPYKGSAPAMSDLIGGQIPFTVDTVAASLPQLKAGKIKAIAVTGATRTTQLP DVPTVAESGFPGFSADSWLAVVAPRGLPVDAKARLQKALAETMADAEIRDKLIANGLQPAYESAAAVAARIEDELPRMRA VAQRANIRAE >Mature_330_residues MKLKLVNLATNLAIVAAVLAGLVPWSGARAQSYPSKPIQLVIPFPPGGATDIVGRLVGKKLGEHLGQPVVIENKAGAGTV VGAAFVAKAPADGYTLLISSGSTFTVNPALNPRLPYDPVKSFEPIGLAARVPLILIANREVPVNNLMQLVAAVRGTPDKY VYGSFGSGTTGHFAGELMWSAIGIKLLHVPYKGSAPAMSDLIGGQIPFTVDTVAASLPQLKAGKIKAIAVTGATRTTQLP DVPTVAESGFPGFSADSWLAVVAPRGLPVDAKARLQKALAETMADAEIRDKLIANGLQPAYESAAAVAARIEDELPRMRA VAQRANIRAE
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 34303; Mature: 34303
Theoretical pI: Translated: 10.16; Mature: 10.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLKLVNLATNLAIVAAVLAGLVPWSGARAQSYPSKPIQLVIPFPPGGATDIVGRLVGKK CEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHH LGEHLGQPVVIENKAGAGTVVGAAFVAKAPADGYTLLISSGSTFTVNPALNPRLPYDPVK HHHHCCCCEEEECCCCCCHHHHHHHHHCCCCCCEEEEEECCCEEEECCCCCCCCCCCCCC SFEPIGLAARVPLILIANREVPVNNLMQLVAAVRGTPDKYVYGSFGSGTTGHFAGELMWS CCCCCCEECCCCEEEEECCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHH AIGIKLLHVPYKGSAPAMSDLIGGQIPFTVDTVAASLPQLKAGKIKAIAVTGATRTTQLP HHCEEEEEECCCCCCCHHHHHHCCCCCEEHHHHHHHCCCCCCCCEEEEEEECCCCCCCCC DVPTVAESGFPGFSADSWLAVVAPRGLPVDAKARLQKALAETMADAEIRDKLIANGLQPA CCCCHHCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH YESAAAVAARIEDELPRMRAVAQRANIRAE HHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKLKLVNLATNLAIVAAVLAGLVPWSGARAQSYPSKPIQLVIPFPPGGATDIVGRLVGKK CEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHH LGEHLGQPVVIENKAGAGTVVGAAFVAKAPADGYTLLISSGSTFTVNPALNPRLPYDPVK HHHHCCCCEEEECCCCCCHHHHHHHHHCCCCCCEEEEEECCCEEEECCCCCCCCCCCCCC SFEPIGLAARVPLILIANREVPVNNLMQLVAAVRGTPDKYVYGSFGSGTTGHFAGELMWS CCCCCCEECCCCEEEEECCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHH AIGIKLLHVPYKGSAPAMSDLIGGQIPFTVDTVAASLPQLKAGKIKAIAVTGATRTTQLP HHCEEEEEECCCCCCCHHHHHHCCCCCEEHHHHHHHCCCCCCCCEEEEEEECCCCCCCCC DVPTVAESGFPGFSADSWLAVVAPRGLPVDAKARLQKALAETMADAEIRDKLIANGLQPA CCCCHHCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH YESAAAVAARIEDELPRMRAVAQRANIRAE HHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2013566 [H]