Click here to switch to the map view.

The map label for this gene is gatA [H]

Identifier: 91789670

GI number: 91789670

Start: 4014128

End: 4015657

Strand: Reverse

Name: gatA [H]

Synonym: Bpro_3826

Alternate gene names: 91789670

Gene position: 4015657-4014128 (Counterclockwise)

Preceding gene: 91789671

Following gene: 91789669

Centisome position: 77.22

GC content: 70.07

Gene sequence:

>1530_bases
ATGGCAACCGATGACAGCCTGGTCGTCCTGTCCGCCGTCGAATTGAGGCGGCTGATCGAGGCCAAACAGATCTCGCCGGT
CGAGCTGCTCGAAGCTTGTATCGCTCGCATCGAGGCGGTGAACCCATTCGTCAATGCCGTCACCGCTACCTGCTTCGAGC
GCGCACGCAGCGAGGCCAGGGCGGCCGAACGCGCCGTGCTCGAGGGCCGCCCGCTGGGCCTGCTGCACGGCCTGCCGATG
GGCGTGAAAGACCTGGAAGCGACCGAGGGCCTGCTCACCACCCTGGGCTCGCCGCTGTATCGCGACCATGTGCCCGCGGC
CGACAACGTGCTCGTGGCGCGCTTGCGCGCAGCCGGTGCGATCGTGGTCGGAAAGACCAACGTGCCCGAGCTGGGCGCCG
GCGCGAACACCCGCAACGCGGTCTGGGGCGCCACCGGCAACCCCTTCGACCCGAGACTCAACGCCGGCGGCTCATCGGGT
GGTTCGGCGGCAGCGCTGGCCTGCGACATGCTTCCGGTGTGCACGGGCTCCGACACTGGGGGGTCGCTGCGCATTCCTGC
GGCCCTGTGCGGTGTGGTGGGTTTTCGGCCCTCGCCGGGCCTGGTGCCGAGTTCGCGCAAGCTGCTCGGCTGGACGCCGA
TCTCGGTGGTCGGGCCGATGGGGCGGACCGTCGCCGACGCCTGCCTGCAACTGGCGGCTTCGGCCGGCGCCGCCGTGGGC
GACCCCCTCAGCTACCCGGTGGACCCAGCGGGTTTCCTGGAGCCGCCGGCGGTGGACCTCGGGGCCTTGCGTGTCGGCTG
GACCGAGGACTTCGGCGCCTGCGACGTCGACGCCTCGATCCGCGGGGCTTTTCGCCGCAAGATCGCCTCGATGAAGCATC
TGTTCCGCAGTTGCGACGAGGTGAAGTTCGAACTGGGCGATGTGCACCGCTGCTTCGACGTGCTGCGCGCCGAGGCTTTC
GTCGCCGGCACGCGCGATGCCTACGAACGCGATCCGGCAAGTCTCGGCCCCAACACGCGGGCCAACTTCGAAATCGGTGC
TGCGATGAGCCTGCTCGACTGTGCCTGGGCGCAGGCAGAACAAACGCGCATCCTCGCGCGCTTCCATGCCGCGATGGCCG
GCTGCGACCTGATCCTCGCGCCGACCACGCCGGTATCGCCTTTCCCCTGGACCACGCTGTATGCCGACACGGTCGACGGC
CAGGCACAAAGCAATTACTACCGCTGGCTGGCGCTGACCTACGTGGTCACGCTGACCACCTTGCCGGCCCTCAGCCTGCC
CTGCGGATTCGATCACGCCGGCATGCCGTTCGGGCTGCAGCTGATCGGCCGTTTCCGGGCGGACCATCACGTGCTTGGCG
TGGCCGCGGCGCTGGAGCAGGCCTTTGCCGGGTCTGACGAGCTGCGGCGGCCGCGTCCCGCGCTCGACCGCCTGCGCTCC
GTCGAGCCCGCCCTGACATCGATCGTTACGGCGCCGCCCGTTCTCGGCGGCGGCACTGGCGGCGCCGGAGCCCCGACGTC
CGCCGCCTGA

Upstream 100 bases:

>100_bases
CGAGTCCGCTGCCGCCGTGGCTGCGCGAATCGAAGACGAGCTGCCGCGCATGCGCGCCGTGGCGCAACGCGCGAACATCC
GGGCGGAATGAGGAACGAAT

Downstream 100 bases:

>100_bases
AGGGGAGACAAGGAATGGACCTATTCAACTGCTTGGCCTCAAAGAGCCAATGCCTTGGGCTGTGGCGCAACGGCTGACCA
TGGGCTTGCCTGTCGTGCTG

Product: amidase

Products: NA

Alternate protein names: Glu-ADT subunit A [H]

Number of amino acids: Translated: 509; Mature: 508

Protein sequence:

>509_residues
MATDDSLVVLSAVELRRLIEAKQISPVELLEACIARIEAVNPFVNAVTATCFERARSEARAAERAVLEGRPLGLLHGLPM
GVKDLEATEGLLTTLGSPLYRDHVPAADNVLVARLRAAGAIVVGKTNVPELGAGANTRNAVWGATGNPFDPRLNAGGSSG
GSAAALACDMLPVCTGSDTGGSLRIPAALCGVVGFRPSPGLVPSSRKLLGWTPISVVGPMGRTVADACLQLAASAGAAVG
DPLSYPVDPAGFLEPPAVDLGALRVGWTEDFGACDVDASIRGAFRRKIASMKHLFRSCDEVKFELGDVHRCFDVLRAEAF
VAGTRDAYERDPASLGPNTRANFEIGAAMSLLDCAWAQAEQTRILARFHAAMAGCDLILAPTTPVSPFPWTTLYADTVDG
QAQSNYYRWLALTYVVTLTTLPALSLPCGFDHAGMPFGLQLIGRFRADHHVLGVAAALEQAFAGSDELRRPRPALDRLRS
VEPALTSIVTAPPVLGGGTGGAGAPTSAA

Sequences:

>Translated_509_residues
MATDDSLVVLSAVELRRLIEAKQISPVELLEACIARIEAVNPFVNAVTATCFERARSEARAAERAVLEGRPLGLLHGLPM
GVKDLEATEGLLTTLGSPLYRDHVPAADNVLVARLRAAGAIVVGKTNVPELGAGANTRNAVWGATGNPFDPRLNAGGSSG
GSAAALACDMLPVCTGSDTGGSLRIPAALCGVVGFRPSPGLVPSSRKLLGWTPISVVGPMGRTVADACLQLAASAGAAVG
DPLSYPVDPAGFLEPPAVDLGALRVGWTEDFGACDVDASIRGAFRRKIASMKHLFRSCDEVKFELGDVHRCFDVLRAEAF
VAGTRDAYERDPASLGPNTRANFEIGAAMSLLDCAWAQAEQTRILARFHAAMAGCDLILAPTTPVSPFPWTTLYADTVDG
QAQSNYYRWLALTYVVTLTTLPALSLPCGFDHAGMPFGLQLIGRFRADHHVLGVAAALEQAFAGSDELRRPRPALDRLRS
VEPALTSIVTAPPVLGGGTGGAGAPTSAA
>Mature_508_residues
ATDDSLVVLSAVELRRLIEAKQISPVELLEACIARIEAVNPFVNAVTATCFERARSEARAAERAVLEGRPLGLLHGLPMG
VKDLEATEGLLTTLGSPLYRDHVPAADNVLVARLRAAGAIVVGKTNVPELGAGANTRNAVWGATGNPFDPRLNAGGSSGG
SAAALACDMLPVCTGSDTGGSLRIPAALCGVVGFRPSPGLVPSSRKLLGWTPISVVGPMGRTVADACLQLAASAGAAVGD
PLSYPVDPAGFLEPPAVDLGALRVGWTEDFGACDVDASIRGAFRRKIASMKHLFRSCDEVKFELGDVHRCFDVLRAEAFV
AGTRDAYERDPASLGPNTRANFEIGAAMSLLDCAWAQAEQTRILARFHAAMAGCDLILAPTTPVSPFPWTTLYADTVDGQ
AQSNYYRWLALTYVVTLTTLPALSLPCGFDHAGMPFGLQLIGRFRADHHVLGVAAALEQAFAGSDELRRPRPALDRLRSV
EPALTSIVTAPPVLGGGTGGAGAPTSAA

Specific function: Furnishes a means for formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu- tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activa

COG id: COG0154

COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amidase family [H]

Homologues:

Organism=Homo sapiens, GI222831590, Length=503, Percent_Identity=27.6341948310139, Blast_Score=154, Evalue=2e-37,
Organism=Homo sapiens, GI195972892, Length=507, Percent_Identity=27.810650887574, Blast_Score=144, Evalue=2e-34,
Organism=Homo sapiens, GI166795287, Length=256, Percent_Identity=30.859375, Blast_Score=72, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17537465, Length=253, Percent_Identity=35.1778656126482, Blast_Score=132, Evalue=3e-31,
Organism=Caenorhabditis elegans, GI17556264, Length=310, Percent_Identity=29.3548387096774, Blast_Score=100, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI17543272, Length=454, Percent_Identity=26.2114537444934, Blast_Score=95, Evalue=8e-20,
Organism=Caenorhabditis elegans, GI71990152, Length=299, Percent_Identity=29.0969899665552, Blast_Score=91, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17538252, Length=189, Percent_Identity=30.1587301587302, Blast_Score=87, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17538254, Length=267, Percent_Identity=30.3370786516854, Blast_Score=75, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI17556276, Length=314, Percent_Identity=27.7070063694268, Blast_Score=73, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17556278, Length=314, Percent_Identity=27.7070063694268, Blast_Score=73, Evalue=3e-13,
Organism=Saccharomyces cerevisiae, GI6319685, Length=389, Percent_Identity=26.9922879177378, Blast_Score=97, Evalue=5e-21,
Organism=Saccharomyces cerevisiae, GI6323950, Length=426, Percent_Identity=23.943661971831, Blast_Score=92, Evalue=2e-19,
Organism=Saccharomyces cerevisiae, GI6320448, Length=234, Percent_Identity=32.0512820512821, Blast_Score=83, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24648435, Length=506, Percent_Identity=27.0750988142292, Blast_Score=138, Evalue=7e-33,
Organism=Drosophila melanogaster, GI24648437, Length=506, Percent_Identity=27.0750988142292, Blast_Score=138, Evalue=7e-33,
Organism=Drosophila melanogaster, GI21356731, Length=494, Percent_Identity=27.7327935222672, Blast_Score=138, Evalue=7e-33,
Organism=Drosophila melanogaster, GI45550774, Length=506, Percent_Identity=27.0750988142292, Blast_Score=138, Evalue=9e-33,
Organism=Drosophila melanogaster, GI24652985, Length=510, Percent_Identity=26.8627450980392, Blast_Score=125, Evalue=5e-29,
Organism=Drosophila melanogaster, GI19922090, Length=510, Percent_Identity=26.8627450980392, Blast_Score=125, Evalue=5e-29,
Organism=Drosophila melanogaster, GI24652981, Length=510, Percent_Identity=26.8627450980392, Blast_Score=125, Evalue=5e-29,
Organism=Drosophila melanogaster, GI24652983, Length=510, Percent_Identity=26.8627450980392, Blast_Score=125, Evalue=5e-29,
Organism=Drosophila melanogaster, GI24644968, Length=500, Percent_Identity=27.2, Blast_Score=125, Evalue=9e-29,
Organism=Drosophila melanogaster, GI161078093, Length=517, Percent_Identity=29.2069632495164, Blast_Score=122, Evalue=5e-28,
Organism=Drosophila melanogaster, GI24648113, Length=479, Percent_Identity=27.348643006263, Blast_Score=112, Evalue=5e-25,
Organism=Drosophila melanogaster, GI24648441, Length=431, Percent_Identity=25.9860788863109, Blast_Score=100, Evalue=3e-21,
Organism=Drosophila melanogaster, GI24648439, Length=431, Percent_Identity=25.9860788863109, Blast_Score=100, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000120
- InterPro:   IPR020556
- InterPro:   IPR004412 [H]

Pfam domain/function: PF01425 Amidase [H]

EC number: NA

Molecular weight: Translated: 53107; Mature: 52976

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATDDSLVVLSAVELRRLIEAKQISPVELLEACIARIEAVNPFVNAVTATCFERARSEAR
CCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAERAVLEGRPLGLLHGLPMGVKDLEATEGLLTTLGSPLYRDHVPAADNVLVARLRAAGA
HHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHCCE
IVVGKTNVPELGAGANTRNAVWGATGNPFDPRLNAGGSSGGSAAALACDMLPVCTGSDTG
EEECCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCEECCCCCCC
GSLRIPAALCGVVGFRPSPGLVPSSRKLLGWTPISVVGPMGRTVADACLQLAASAGAAVG
CCEECHHHHHHHHCCCCCCCCCCCCCCEEECCCHHHHCCCCHHHHHHHHHHHHHCCCCCC
DPLSYPVDPAGFLEPPAVDLGALRVGWTEDFGACDVDASIRGAFRRKIASMKHLFRSCDE
CCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
VKFELGDVHRCFDVLRAEAFVAGTRDAYERDPASLGPNTRANFEIGAAMSLLDCAWAQAE
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHH
QTRILARFHAAMAGCDLILAPTTPVSPFPWTTLYADTVDGQAQSNYYRWLALTYVVTLTT
HHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHH
LPALSLPCGFDHAGMPFGLQLIGRFRADHHVLGVAAALEQAFAGSDELRRPRPALDRLRS
HHHHCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHH
VEPALTSIVTAPPVLGGGTGGAGAPTSAA
CCHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ATDDSLVVLSAVELRRLIEAKQISPVELLEACIARIEAVNPFVNAVTATCFERARSEAR
CCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAERAVLEGRPLGLLHGLPMGVKDLEATEGLLTTLGSPLYRDHVPAADNVLVARLRAAGA
HHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHCCE
IVVGKTNVPELGAGANTRNAVWGATGNPFDPRLNAGGSSGGSAAALACDMLPVCTGSDTG
EEECCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCEECCCCCCC
GSLRIPAALCGVVGFRPSPGLVPSSRKLLGWTPISVVGPMGRTVADACLQLAASAGAAVG
CCEECHHHHHHHHCCCCCCCCCCCCCCEEECCCHHHHCCCCHHHHHHHHHHHHHCCCCCC
DPLSYPVDPAGFLEPPAVDLGALRVGWTEDFGACDVDASIRGAFRRKIASMKHLFRSCDE
CCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
VKFELGDVHRCFDVLRAEAFVAGTRDAYERDPASLGPNTRANFEIGAAMSLLDCAWAQAE
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHH
QTRILARFHAAMAGCDLILAPTTPVSPFPWTTLYADTVDGQAQSNYYRWLALTYVVTLTT
HHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHH
LPALSLPCGFDHAGMPFGLQLIGRFRADHHVLGVAAALEQAFAGSDELRRPRPALDRLRS
HHHHCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHH
VEPALTSIVTAPPVLGGGTGGAGAPTSAA
CCHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA