Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is 91789668

Identifier: 91789668

GI number: 91789668

Start: 4012721

End: 4013425

Strand: Direct

Name: 91789668

Synonym: Bpro_3824

Alternate gene names: NA

Gene position: 4012721-4013425 (Clockwise)

Preceding gene: 91789665

Following gene: 91789673

Centisome position: 77.16

GC content: 65.25

Gene sequence:

>705_bases
ATGCCCTCTTCCGCCACCTCTCAAAACGACGCAGCCGCGCCACGCGGCAGGTACCACCACGGCAGCCTGCGCGAGGCCAT
GGTGGCCGCCGCGCTTGAACTGATCGAAGCCCATGGCGTGGAGCACTTAAGCGTGCGCGAAGCGGCGAGGACGGCTGGCG
TGTCTCCCGGTGCCCCGTTTAGGCACTTTCCCACCAAGGCTGCATTGCTGACCGCCGTTGCAGAACAAGCGACAGAGCGC
CTGCACGCGCAGGTGGAATTGGGCCTTGCCAACAGCGCGGGCCAGCCAGCACTGCTGCGTTTCGCGGCCATCGGAGAGGC
CTACCTGGATTGGGCGGCGCGTCATCCCACACATTTCCAAGTGGTAAGCCAGCGCCAATTGCTCGATGCAGACGCCCCCG
CGCGCCTGGCCCCGCACAACGACGCGATCCGTGCCCATATGCAGGCGTTGCTGGACGAAGCGTTCGCCGACACTCCCACC
GCGCTCGCCCGGCTACCAGCGCTGCAATTGCTCGGACGAGCCCTGGTTTATGGCCTGTCACGCATGGGGGTGGATGGACA
TTTCCCGGAATGGGACCTTGGCCATGCTTCTGCGCCGACCGCCGTGCGCGACGCCTTTGTGCTTTTTATCGAACTGCTGG
CCACCGGACGGGATGCTCAAACACGTGAGGCGGTGGCCCGATGGGCGGAGAGGCTTTCTGCTTGA

Upstream 100 bases:

>100_bases
TCCTGGGTTAACTGGCGACGATGTAATCGGTGAATACATCTGCATTGAATTCTAACCCTAAAATAATCAATGCTTACATT
GTCTTAGCACCGAATCCCCA

Downstream 100 bases:

>100_bases
CGCTGGGCGGTGGTCTTGCTTTCGGCGCGCGCAATGCACCTTGAGTGAGCGATGGCGGCTTCTCCCGTCGATGATATTGG
TGCCAGTTAGCCGACCGACA

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulator TetR Family Protein; Transcription Regulator TetR Family Protein; Regulatory Protein Tetr; TetR-Family Transcriptional Regulator

Number of amino acids: Translated: 234; Mature: 233

Protein sequence:

>234_residues
MPSSATSQNDAAAPRGRYHHGSLREAMVAAALELIEAHGVEHLSVREAARTAGVSPGAPFRHFPTKAALLTAVAEQATER
LHAQVELGLANSAGQPALLRFAAIGEAYLDWAARHPTHFQVVSQRQLLDADAPARLAPHNDAIRAHMQALLDEAFADTPT
ALARLPALQLLGRALVYGLSRMGVDGHFPEWDLGHASAPTAVRDAFVLFIELLATGRDAQTREAVARWAERLSA

Sequences:

>Translated_234_residues
MPSSATSQNDAAAPRGRYHHGSLREAMVAAALELIEAHGVEHLSVREAARTAGVSPGAPFRHFPTKAALLTAVAEQATER
LHAQVELGLANSAGQPALLRFAAIGEAYLDWAARHPTHFQVVSQRQLLDADAPARLAPHNDAIRAHMQALLDEAFADTPT
ALARLPALQLLGRALVYGLSRMGVDGHFPEWDLGHASAPTAVRDAFVLFIELLATGRDAQTREAVARWAERLSA
>Mature_233_residues
PSSATSQNDAAAPRGRYHHGSLREAMVAAALELIEAHGVEHLSVREAARTAGVSPGAPFRHFPTKAALLTAVAEQATERL
HAQVELGLANSAGQPALLRFAAIGEAYLDWAARHPTHFQVVSQRQLLDADAPARLAPHNDAIRAHMQALLDEAFADTPTA
LARLPALQLLGRALVYGLSRMGVDGHFPEWDLGHASAPTAVRDAFVLFIELLATGRDAQTREAVARWAERLSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25072; Mature: 24940

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSSATSQNDAAAPRGRYHHGSLREAMVAAALELIEAHGVEHLSVREAARTAGVSPGAPF
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCC
RHFPTKAALLTAVAEQATERLHAQVELGLANSAGQPALLRFAAIGEAYLDWAARHPTHFQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHH
VVSQRQLLDADAPARLAPHNDAIRAHMQALLDEAFADTPTALARLPALQLLGRALVYGLS
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
RMGVDGHFPEWDLGHASAPTAVRDAFVLFIELLATGRDAQTREAVARWAERLSA
HCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PSSATSQNDAAAPRGRYHHGSLREAMVAAALELIEAHGVEHLSVREAARTAGVSPGAPF
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCC
RHFPTKAALLTAVAEQATERLHAQVELGLANSAGQPALLRFAAIGEAYLDWAARHPTHFQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHH
VVSQRQLLDADAPARLAPHNDAIRAHMQALLDEAFADTPTALARLPALQLLGRALVYGLS
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
RMGVDGHFPEWDLGHASAPTAVRDAFVLFIELLATGRDAQTREAVARWAERLSA
HCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA