| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is 91789664
Identifier: 91789664
GI number: 91789664
Start: 4009362
End: 4010276
Strand: Direct
Name: 91789664
Synonym: Bpro_3820
Alternate gene names: NA
Gene position: 4009362-4010276 (Clockwise)
Preceding gene: 91789663
Following gene: 91789665
Centisome position: 77.1
GC content: 61.64
Gene sequence:
>915_bases ATGACGACCACACCATGCATTGACACTCTGAGTGGGTCTCATCCACCAATTCGAAAGCAACAGATGAAGTTTTCGTCGGG TTCGAACTCTCCCGGCATCAGGGTGCCTCCCGGCGCTATCGACTGCCATCACCATATTTACGATGCGCGCTACCCTGCAG CGGAGAACGCCACCCTCAGGCCGGCCGACGCCTTGATCGCCGATTACCGCGCGCTGCAAGCGCGCATTGGCACCACCCGC AACGTGATCGTGCAACCCTCCACCTATGGCGTAGACAACCGCCTGCTGGTCGAGTCGCTCGCCGCATTCGGGCTGGAGAA TGCGCGGGGTGTCGCTGTCGTCAACACCAGCGTGACCGACGGCGAGCTCAAGCAACTGCACGACGCTGGCGTGCGCGGCA TTCGGTTCAACCTGGCGCCTCCCGGCACCACCACGCTCGACATGGTGCGCCCGCTCGCACGACGCATTGCGCCCATGGGC TGGCATATTCAGCTCAATGCACCGTCGGCAGCGCTACTCGATGCCAAATCAGTCTGGAGCGATCTGCCCGTTCCCGTGGT GTTCGACCACCTGGGCCGTGTGCCGCAACCGGGCGCTGCCAACCATCCCACCTTCGCCATGATTCGTGGACTGCTTCAGC AGGGCAAGGCCTATGTCAAACTTTCCGGGTTCTACAACGAGTCCAACGTCGGCTACCCGTCCTATTCAGACAGCGTGCAA GTGGCTACCCTCTATGCCAAGGAAGCGCCCGAACGTGTGGTCTGGGGAAGCGACTGGCCGCACCCCACCGAAAAAGACAA GGGCTATCCAGACGACGCCCATTTGATCGATTTGCTGTCCGAAGTCGTACCCGACGAGGCGGCCCGCCATCGCATTCTGG TGGACACCCCGGCAAGGCTGTACCAGTTCGCATGA
Upstream 100 bases:
>100_bases ACCAGTCCACAAGACAATCTCCAGACGCTGCGTCTGGTGGAGGAGATCTACAGCTTCTCCCGCAATTAGCCCGACCGGAT CCGCCCTCCCTTTTTTTGCC
Downstream 100 bases:
>100_bases GCCCTGGACGGTTCCCGGCTGAGCTTTGACGTATTCCCGGCCAGTGAGTCAACGCCGTCCAAGGCCTTGCCGCTCGGCGC CGCAGGCTGTACCAGTGCCA
Product: amidohydrolase 2
Products: NA
Alternate protein names: 2-Pyrone-4 6-Dicarboxylic Acid Hydrolase; Amidohydrolase; Dicarboxylic Acid Hydrolase; Metal-Dependent Hydrolase; Amidohydrolase Family Protein; 2-Pyrone-4 6-Dicarbaxylate Hydrolase; 2-Pyrone-4 6-Dicarboxylate Hydrolase; 2-Pyrone-4 6-Dicarboxylate Lactonase; Hydrolase Amidohydrolase 2 Motif; (2-Pyrone-4 6-)Dicarboxylic Acid Hydrolase; Amidase; Metal-Dependent Hydrolase Of TIM-Barrel Fold; Transcriptional Regulator GntR; Aminohydrolase; Metal-Dependent Transmembrane Hydrolase; Metal-Dependent Hydrolase Protein; Metal-Dependent Hydrolase Of TIM-Barrel Fold Family; Amidohydrolase 2 Family; Amidohydrolase Family; PDC Hydrolase-Like Protein; Exported Protein
Number of amino acids: Translated: 304; Mature: 303
Protein sequence:
>304_residues MTTTPCIDTLSGSHPPIRKQQMKFSSGSNSPGIRVPPGAIDCHHHIYDARYPAAENATLRPADALIADYRALQARIGTTR NVIVQPSTYGVDNRLLVESLAAFGLENARGVAVVNTSVTDGELKQLHDAGVRGIRFNLAPPGTTTLDMVRPLARRIAPMG WHIQLNAPSAALLDAKSVWSDLPVPVVFDHLGRVPQPGAANHPTFAMIRGLLQQGKAYVKLSGFYNESNVGYPSYSDSVQ VATLYAKEAPERVVWGSDWPHPTEKDKGYPDDAHLIDLLSEVVPDEAARHRILVDTPARLYQFA
Sequences:
>Translated_304_residues MTTTPCIDTLSGSHPPIRKQQMKFSSGSNSPGIRVPPGAIDCHHHIYDARYPAAENATLRPADALIADYRALQARIGTTR NVIVQPSTYGVDNRLLVESLAAFGLENARGVAVVNTSVTDGELKQLHDAGVRGIRFNLAPPGTTTLDMVRPLARRIAPMG WHIQLNAPSAALLDAKSVWSDLPVPVVFDHLGRVPQPGAANHPTFAMIRGLLQQGKAYVKLSGFYNESNVGYPSYSDSVQ VATLYAKEAPERVVWGSDWPHPTEKDKGYPDDAHLIDLLSEVVPDEAARHRILVDTPARLYQFA >Mature_303_residues TTTPCIDTLSGSHPPIRKQQMKFSSGSNSPGIRVPPGAIDCHHHIYDARYPAAENATLRPADALIADYRALQARIGTTRN VIVQPSTYGVDNRLLVESLAAFGLENARGVAVVNTSVTDGELKQLHDAGVRGIRFNLAPPGTTTLDMVRPLARRIAPMGW HIQLNAPSAALLDAKSVWSDLPVPVVFDHLGRVPQPGAANHPTFAMIRGLLQQGKAYVKLSGFYNESNVGYPSYSDSVQV ATLYAKEAPERVVWGSDWPHPTEKDKGYPDDAHLIDLLSEVVPDEAARHRILVDTPARLYQFA
Specific function: Unknown
COG id: COG3618
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33125; Mature: 32994
Theoretical pI: Translated: 7.40; Mature: 7.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTPCIDTLSGSHPPIRKQQMKFSSGSNSPGIRVPPGAIDCHHHIYDARYPAAENATLR CCCCCCCHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCC PADALIADYRALQARIGTTRNVIVQPSTYGVDNRLLVESLAAFGLENARGVAVVNTSVTD HHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCC GELKQLHDAGVRGIRFNLAPPGTTTLDMVRPLARRIAPMGWHIQLNAPSAALLDAKSVWS HHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHH DLPVPVVFDHLGRVPQPGAANHPTFAMIRGLLQQGKAYVKLSGFYNESNVGYPSYSDSVQ CCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCEE VATLYAKEAPERVVWGSDWPHPTEKDKGYPDDAHLIDLLSEVVPDEAARHRILVDTPARL EEEEEECCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHCCEEEEECHHHH YQFA HCCC >Mature Secondary Structure TTTPCIDTLSGSHPPIRKQQMKFSSGSNSPGIRVPPGAIDCHHHIYDARYPAAENATLR CCCCCCHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCC PADALIADYRALQARIGTTRNVIVQPSTYGVDNRLLVESLAAFGLENARGVAVVNTSVTD HHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCC GELKQLHDAGVRGIRFNLAPPGTTTLDMVRPLARRIAPMGWHIQLNAPSAALLDAKSVWS HHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHH DLPVPVVFDHLGRVPQPGAANHPTFAMIRGLLQQGKAYVKLSGFYNESNVGYPSYSDSVQ CCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCEE VATLYAKEAPERVVWGSDWPHPTEKDKGYPDDAHLIDLLSEVVPDEAARHRILVDTPARL EEEEEECCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHCCEEEEECHHHH YQFA HCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA