Click here to switch to the map view.

The map label for this gene is ycjP [C]

Identifier: 91789661

GI number: 91789661

Start: 4006296

End: 4007147

Strand: Direct

Name: ycjP [C]

Synonym: Bpro_3817

Alternate gene names: 91789661

Gene position: 4006296-4007147 (Clockwise)

Preceding gene: 91789660

Following gene: 91789662

Centisome position: 77.04

GC content: 57.98

Gene sequence:

>852_bases
ATGCGTGCTTCCAACTCCTTTGGCGACTCGGTTTCGCGCCTGCTGCGACAGGGCGGGCTGATGGCTGTCATCGTCCTGTA
CACCCTGTACTCGGCGATGCCCTTCGTCTGGCTTGGCTCGATGTCGCTGCGCACCACGTCCGAGATCAGCGCCGCGCACT
TTGCCTGGCCGCAAACGCTGCACTGGGAAAAATTCCGTGTCGCCTGGGTTGACTCCAACTTTGCGCAGTATTTCTGGAAC
AGCACGCTGGTGGTGGGCGCGGCCGTGGCCATCGTGACCCTGTTCGGTGCAGCCGCTGCCCACTGCCTGGCGCGCTACAA
CTTTCGTGGCAACCGGCTCGTGTACTTCACCCTGTTCAGCTCCATCGTCTTTCCACCACAAATTATCCTGATCTCCTTGT
TCCAGGTGCTGGTGGAATTCGACCTGTACAACACGCGTCTGGGTCTCACCCTGGTGTATGTCGGTTTGCAGCTTCCGTTG
ACCGTGTACCTGCTGGAAGGCTTTTTCGCCCGCATCCCGCAGGACCTGTTTGACGCGGCCAAGATCGACGGTTATTCAGA
CTTCGAGATCTTTTGGAAAATCGTTCTGCCGGTGGGCATGCCCGCCATCGCCACCACCATCATCCTGAATTTCATTCAAC
TGTGGAACGAATTCCTGTTTGCGGTGGTGCTGGTCAGCGAACCGGGCCTGCGCACACTGCCCATCGGCATCCGCGCTTTC
ATGGGCGACTACTTCCAGGACATCGGAATGATTGCCACCGGAATGATGATCGCCATCATCCCGGTCGTGATTGTCTACGC
CTTCTTCTCGGAAAAGCTCATTCAGGGGATGACAGCCGGCGCCGTGAAATAA

Upstream 100 bases:

>100_bases
ATCCGTCGGCCATCGCCGTGGTGTGGTTCTTTGTGGTGGTGGGCTTCGTTGTGTTCTTCAACGTGCTGTTTCGCCGCCGC
GAACGTCTGGAATACTAAAA

Downstream 100 bases:

>100_bases
GCCCGCTCATCGTTCACTTGCCCACACAACGGAGAAACCCAATTGGCTACCGTCACTCTCAAAAATATCTGCAAAAGCTA
CCGCGGCACCCCCGTTCCAT

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MRASNSFGDSVSRLLRQGGLMAVIVLYTLYSAMPFVWLGSMSLRTTSEISAAHFAWPQTLHWEKFRVAWVDSNFAQYFWN
STLVVGAAVAIVTLFGAAAAHCLARYNFRGNRLVYFTLFSSIVFPPQIILISLFQVLVEFDLYNTRLGLTLVYVGLQLPL
TVYLLEGFFARIPQDLFDAAKIDGYSDFEIFWKIVLPVGMPAIATTIILNFIQLWNEFLFAVVLVSEPGLRTLPIGIRAF
MGDYFQDIGMIATGMMIAIIPVVIVYAFFSEKLIQGMTAGAVK

Sequences:

>Translated_283_residues
MRASNSFGDSVSRLLRQGGLMAVIVLYTLYSAMPFVWLGSMSLRTTSEISAAHFAWPQTLHWEKFRVAWVDSNFAQYFWN
STLVVGAAVAIVTLFGAAAAHCLARYNFRGNRLVYFTLFSSIVFPPQIILISLFQVLVEFDLYNTRLGLTLVYVGLQLPL
TVYLLEGFFARIPQDLFDAAKIDGYSDFEIFWKIVLPVGMPAIATTIILNFIQLWNEFLFAVVLVSEPGLRTLPIGIRAF
MGDYFQDIGMIATGMMIAIIPVVIVYAFFSEKLIQGMTAGAVK
>Mature_283_residues
MRASNSFGDSVSRLLRQGGLMAVIVLYTLYSAMPFVWLGSMSLRTTSEISAAHFAWPQTLHWEKFRVAWVDSNFAQYFWN
STLVVGAAVAIVTLFGAAAAHCLARYNFRGNRLVYFTLFSSIVFPPQIILISLFQVLVEFDLYNTRLGLTLVYVGLQLPL
TVYLLEGFFARIPQDLFDAAKIDGYSDFEIFWKIVLPVGMPAIATTIILNFIQLWNEFLFAVVLVSEPGLRTLPIGIRAF
MGDYFQDIGMIATGMMIAIIPVVIVYAFFSEKLIQGMTAGAVK

Specific function: Probably Part Of The Binding-Protein-Dependent Transport System Ycjnop. Probably Responsible For The Translocation Of The Substrate Across The Membrane. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=281, Percent_Identity=27.4021352313167, Blast_Score=111, Evalue=4e-26,
Organism=Escherichia coli, GI1790464, Length=271, Percent_Identity=26.5682656826568, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1789860, Length=186, Percent_Identity=23.1182795698925, Blast_Score=71, Evalue=8e-14,
Organism=Escherichia coli, GI1787368, Length=237, Percent_Identity=29.1139240506329, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31681; Mature: 31681

Theoretical pI: Translated: 7.58; Mature: 7.58

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRASNSFGDSVSRLLRQGGLMAVIVLYTLYSAMPFVWLGSMSLRTTSEISAAHFAWPQTL
CCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCC
HWEKFRVAWVDSNFAQYFWNSTLVVGAAVAIVTLFGAAAAHCLARYNFRGNRLVYFTLFS
CCCCEEEEEECCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHH
SIVFPPQIILISLFQVLVEFDLYNTRLGLTLVYVGLQLPLTVYLLEGFFARIPQDLFDAA
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
KIDGYSDFEIFWKIVLPVGMPAIATTIILNFIQLWNEFLFAVVLVSEPGLRTLPIGIRAF
HCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
MGDYFQDIGMIATGMMIAIIPVVIVYAFFSEKLIQGMTAGAVK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRASNSFGDSVSRLLRQGGLMAVIVLYTLYSAMPFVWLGSMSLRTTSEISAAHFAWPQTL
CCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCC
HWEKFRVAWVDSNFAQYFWNSTLVVGAAVAIVTLFGAAAAHCLARYNFRGNRLVYFTLFS
CCCCEEEEEECCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHH
SIVFPPQIILISLFQVLVEFDLYNTRLGLTLVYVGLQLPLTVYLLEGFFARIPQDLFDAA
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
KIDGYSDFEIFWKIVLPVGMPAIATTIILNFIQLWNEFLFAVVLVSEPGLRTLPIGIRAF
HCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
MGDYFQDIGMIATGMMIAIIPVVIVYAFFSEKLIQGMTAGAVK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8920183 [H]