| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91789653
Identifier: 91789653
GI number: 91789653
Start: 3997531
End: 3998463
Strand: Direct
Name: 91789653
Synonym: Bpro_3809
Alternate gene names: NA
Gene position: 3997531-3998463 (Clockwise)
Preceding gene: 91789652
Following gene: 91789654
Centisome position: 76.87
GC content: 60.34
Gene sequence:
>933_bases ATGTGCACGTCATGGGCGTTCGCGGCCTACCCTGACAAGCCCATCAAGCTCATCGTTCCTTACCCTCCCGGTGGTGCGAC AGATGTCATTGGCCGCATCCTAGCCCTGAAACTGGGCGAATCCCTTGGCCAGCAGGTGATCGTGGATAACCGGGGTGGTG CTGGAGGCAATCTTGGTGCCGAAGCAGTAGCCAAATCGGCGCCCGATGGCTATACCCTGCTGATGGGTGCCTTGACATCC CACTCAACCATGGCCACCCTTGAGAAAGGAAAACTTCGTTACGACATCATCAAGGACTTCACCCCACTGATGGTGGTCGG ATCCGTCCCCCTTGTCCTGGTCGTTAACCCGCAACTTCCCGTCAAAAACCTGCAGGAGTTGATCACTTATGCGAAGACGA ATCCGGACAAGCTGTCTTACGCCTCTTCCGGCGCAGGTGCACCGCAACGGATGGCGGCGGAAATTTTTCGCAAGGAGGCA TCGGTCGGCATGCTGCACATTCCGTACAAGGGCAGTGGTCCTGCGATGACCGACCTGGTCGGCGGCCAGGTGAACCTGAT GTTCGAAACTGTGCCGGCCGCGCAGCCCTTCATCAAAAGCGGGCAACTGCGGGCTCTGGCCGTCACGACACCCACGCGCA TCTCGATGCTGCCTGAAAGTCCGACGACGGCAGAAGCCGGCCTGCCTGGGCTCGAGGTGAGCTCCACCTTCGGCGTACTG GCTCCCGCCGGCACACCGGCCACCATCGTGGAACACCTGAATGCAGCGCTGGCCAAAATCGTCCAATCGCCGGAGGTCAA GGAGCAATTCCTGCGCCAGGGCGTGTATGCCCTGCCGCCCACCACGCCGGCAAAAGCTGCGGAGCGCCTGCGCAGCGAAG TGTCTCGCTGGGAAAAGGTCATCAAGGAAGCCAACATCAAGGCAGACGACTGA
Upstream 100 bases:
>100_bases AACGTTTTTATGTTGAACCGAAGGGGATCACATGGACAACGGAAAATGGAATCAAGGACGGCGCAAGCTCATTCGCGCAG GGCTGATGCTGGGGATGGCA
Downstream 100 bases:
>100_bases GCTGTCGGCCACCGGATATTTTCAAACACCCTCATGACCATGAAATCAAGCGACACATCCAAAAACCATTCCGAAGAAAC CGGTCTGAGAAAGGGCCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 310; Mature: 310
Protein sequence:
>310_residues MCTSWAFAAYPDKPIKLIVPYPPGGATDVIGRILALKLGESLGQQVIVDNRGGAGGNLGAEAVAKSAPDGYTLLMGALTS HSTMATLEKGKLRYDIIKDFTPLMVVGSVPLVLVVNPQLPVKNLQELITYAKTNPDKLSYASSGAGAPQRMAAEIFRKEA SVGMLHIPYKGSGPAMTDLVGGQVNLMFETVPAAQPFIKSGQLRALAVTTPTRISMLPESPTTAEAGLPGLEVSSTFGVL APAGTPATIVEHLNAALAKIVQSPEVKEQFLRQGVYALPPTTPAKAAERLRSEVSRWEKVIKEANIKADD
Sequences:
>Translated_310_residues MCTSWAFAAYPDKPIKLIVPYPPGGATDVIGRILALKLGESLGQQVIVDNRGGAGGNLGAEAVAKSAPDGYTLLMGALTS HSTMATLEKGKLRYDIIKDFTPLMVVGSVPLVLVVNPQLPVKNLQELITYAKTNPDKLSYASSGAGAPQRMAAEIFRKEA SVGMLHIPYKGSGPAMTDLVGGQVNLMFETVPAAQPFIKSGQLRALAVTTPTRISMLPESPTTAEAGLPGLEVSSTFGVL APAGTPATIVEHLNAALAKIVQSPEVKEQFLRQGVYALPPTTPAKAAERLRSEVSRWEKVIKEANIKADD >Mature_310_residues MCTSWAFAAYPDKPIKLIVPYPPGGATDVIGRILALKLGESLGQQVIVDNRGGAGGNLGAEAVAKSAPDGYTLLMGALTS HSTMATLEKGKLRYDIIKDFTPLMVVGSVPLVLVVNPQLPVKNLQELITYAKTNPDKLSYASSGAGAPQRMAAEIFRKEA SVGMLHIPYKGSGPAMTDLVGGQVNLMFETVPAAQPFIKSGQLRALAVTTPTRISMLPESPTTAEAGLPGLEVSSTFGVL APAGTPATIVEHLNAALAKIVQSPEVKEQFLRQGVYALPPTTPAKAAERLRSEVSRWEKVIKEANIKADD
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 32697; Mature: 32697
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCTSWAFAAYPDKPIKLIVPYPPGGATDVIGRILALKLGESLGQQVIVDNRGGAGGNLGA CCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCH EAVAKSAPDGYTLLMGALTSHSTMATLEKGKLRYDIIKDFTPLMVVGSVPLVLVVNPQLP HHHHHCCCCCCEEEHHHHHCCHHHHHHHCCCCHHHHHHCCCHHEEECCCCEEEEECCCCC VKNLQELITYAKTNPDKLSYASSGAGAPQRMAAEIFRKEASVGMLHIPYKGSGPAMTDLV HHHHHHHHHHHCCCCHHHEECCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHC GGQVNLMFETVPAAQPFIKSGQLRALAVTTPTRISMLPESPTTAEAGLPGLEVSSTFGVL CCEEEEEEEECCCCCHHHHCCCEEEEEEECCCEEEECCCCCCCHHCCCCCCEECCCCCEE APAGTPATIVEHLNAALAKIVQSPEVKEQFLRQGVYALPPTTPAKAAERLRSEVSRWEKV ECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHH IKEANIKADD HHHCCCCCCC >Mature Secondary Structure MCTSWAFAAYPDKPIKLIVPYPPGGATDVIGRILALKLGESLGQQVIVDNRGGAGGNLGA CCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCH EAVAKSAPDGYTLLMGALTSHSTMATLEKGKLRYDIIKDFTPLMVVGSVPLVLVVNPQLP HHHHHCCCCCCEEEHHHHHCCHHHHHHHCCCCHHHHHHCCCHHEEECCCCEEEEECCCCC VKNLQELITYAKTNPDKLSYASSGAGAPQRMAAEIFRKEASVGMLHIPYKGSGPAMTDLV HHHHHHHHHHHCCCCHHHEECCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHC GGQVNLMFETVPAAQPFIKSGQLRALAVTTPTRISMLPESPTTAEAGLPGLEVSSTFGVL CCEEEEEEEECCCCCHHHHCCCEEEEEEECCCEEEECCCCCCCHHCCCCCCEECCCCCEE APAGTPATIVEHLNAALAKIVQSPEVKEQFLRQGVYALPPTTPAKAAERLRSEVSRWEKV ECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHH IKEANIKADD HHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2013566 [H]