| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91789613
Identifier: 91789613
GI number: 91789613
Start: 3963319
End: 3963774
Strand: Direct
Name: 91789613
Synonym: Bpro_3768
Alternate gene names: NA
Gene position: 3963319-3963774 (Clockwise)
Preceding gene: 91789612
Following gene: 91789614
Centisome position: 76.21
GC content: 63.38
Gene sequence:
>456_bases ATGAGCAACCTCGTCCCCAACCACCGCAACCGCGAGCTGGCGATTATTCACATTGCCAAGCAGCAGCTGAACATGGACGA TGAGAGCTACCGCGCCATGCTCTGGGCCTGCGGTCGCGTCAAGTCATCCAAAGACCTGGACTACCCCGGCCGGGTGCGGG TGATTGACCACCTGAAGAAATGCGGTTTTCAAGTCGATCAAACCAAGGGCAAGGCCGCACACCCCGGCCGCCCGCACAAC ATGAATAGCGAAGCGCGCGGCCCGCAGCTCAGCAAGGTCGAGGCGCTTCTGACCGACGCCGGCCGCGAGTGGGCCTATGC CGACGGCATGGCCAGGCGCATGTTCAAGGTCGAGCGCGTGGCGCTGTGCCACGAGGGCCAGCTGCAAAAGATCATCGCCG CGCTCACCTACGACCAGAAGCGTCGGGCCAAGCTGGCTGCTGGAGCTGCAGCATGA
Upstream 100 bases:
>100_bases TTGACTGCGGTCAACCCTATCCCGAGGCTGACGATCAGCGGCGGACTCTCGCAGCCGCCATGCGTGAGTATTCCGGCTAC CTTGAGTCGGTGTTCCCAAA
Downstream 100 bases:
>100_bases CCGCCGACGACTGGAAGAAGGTGGAAGCCGCGTTGCAAAGCCCCTATGGCCGGGCAAAGCTGGAGGTGGACGGCTACGCC CTCGATCTGGTAGTGCAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MSNLVPNHRNRELAIIHIAKQQLNMDDESYRAMLWACGRVKSSKDLDYPGRVRVIDHLKKCGFQVDQTKGKAAHPGRPHN MNSEARGPQLSKVEALLTDAGREWAYADGMARRMFKVERVALCHEGQLQKIIAALTYDQKRRAKLAAGAAA
Sequences:
>Translated_151_residues MSNLVPNHRNRELAIIHIAKQQLNMDDESYRAMLWACGRVKSSKDLDYPGRVRVIDHLKKCGFQVDQTKGKAAHPGRPHN MNSEARGPQLSKVEALLTDAGREWAYADGMARRMFKVERVALCHEGQLQKIIAALTYDQKRRAKLAAGAAA >Mature_150_residues SNLVPNHRNRELAIIHIAKQQLNMDDESYRAMLWACGRVKSSKDLDYPGRVRVIDHLKKCGFQVDQTKGKAAHPGRPHNM NSEARGPQLSKVEALLTDAGREWAYADGMARRMFKVERVALCHEGQLQKIIAALTYDQKRRAKLAAGAAA
Specific function: Unknown
COG id: COG4382
COG function: function code S; Mu-like prophage protein gp16
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16949; Mature: 16818
Theoretical pI: Translated: 10.38; Mature: 10.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNLVPNHRNRELAIIHIAKQQLNMDDESYRAMLWACGRVKSSKDLDYPGRVRVIDHLKK CCCCCCCCCCCEEEEEEEEHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH CGFQVDQTKGKAAHPGRPHNMNSEARGPQLSKVEALLTDAGREWAYADGMARRMFKVERV CCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH ALCHEGQLQKIIAALTYDQKRRAKLAAGAAA HHCCCCHHHHHHHHHHCCHHHHHHHHCCCCC >Mature Secondary Structure SNLVPNHRNRELAIIHIAKQQLNMDDESYRAMLWACGRVKSSKDLDYPGRVRVIDHLKK CCCCCCCCCCEEEEEEEEHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH CGFQVDQTKGKAAHPGRPHNMNSEARGPQLSKVEALLTDAGREWAYADGMARRMFKVERV CCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH ALCHEGQLQKIIAALTYDQKRRAKLAAGAAA HHCCCCHHHHHHHHHHCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA