| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91789606
Identifier: 91789606
GI number: 91789606
Start: 3960314
End: 3960847
Strand: Direct
Name: 91789606
Synonym: Bpro_3761
Alternate gene names: NA
Gene position: 3960314-3960847 (Clockwise)
Preceding gene: 91789605
Following gene: 91789607
Centisome position: 76.16
GC content: 64.61
Gene sequence:
>534_bases ATGAAATCCGATCAAGTCATTGCGCTGGAGATCGCCACGCTGGCCGAGCTGGCCAAGCTCGTGCCCGAAACCATCTACGG CGTGCCGGACAACAGCCGCAACGTGATCGCCGCCCAGATCGACGTGCTGGCGCACCGGCTGACCAGTGACCAGGTGCATG ACGGCTACATGGCCACGGCTCCTGACGATATGTTTCTGGCTCTGCTGCACGCCAGTGATTGGGCGCACGACCTGCTGTCG CCCGAATATGACTTCCCGCCCAGCATGGAATGGCGCGACGTGGTCAAGTACGCGGACGGTGCCGAGCTGGTGGACGATCG CGCCAAGGCCGCGCTGCACGCCGCACTGGAGAGCTATGCCCTGGAGCGCAGCAACGAACTGAGCGCGGACATCCGCCACT CGCTGGCCAACTACGACGCAGACGAGCCGCTTATGAATGACCCTGAGCTGATCGCCGCGTCCAGGGCGGCCGTCAAGCGC CTGGTGGATGACCGCGCCCGTGCAGGCCTTGCGCTGGAAGGCGGTGCGAAATGA
Upstream 100 bases:
>100_bases ACGACGGCCTCGGGCTGCTCTCGGCGCATTACAGCACCCACCCACGCGTGCCCGATGTGAAGTTCCGCATCGTTGACGAG TTCACCGAGGAGGAAATCCA
Downstream 100 bases:
>100_bases GCACGATCCCAGCCCACAACAGTCACGACCGGCGCATCCAGATCAACCAGGTGGGCAGTTGGTCCACCATGTTTCGCTAC TCAACCGAGCGCGGCCAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MKSDQVIALEIATLAELAKLVPETIYGVPDNSRNVIAAQIDVLAHRLTSDQVHDGYMATAPDDMFLALLHASDWAHDLLS PEYDFPPSMEWRDVVKYADGAELVDDRAKAALHAALESYALERSNELSADIRHSLANYDADEPLMNDPELIAASRAAVKR LVDDRARAGLALEGGAK
Sequences:
>Translated_177_residues MKSDQVIALEIATLAELAKLVPETIYGVPDNSRNVIAAQIDVLAHRLTSDQVHDGYMATAPDDMFLALLHASDWAHDLLS PEYDFPPSMEWRDVVKYADGAELVDDRAKAALHAALESYALERSNELSADIRHSLANYDADEPLMNDPELIAASRAAVKR LVDDRARAGLALEGGAK >Mature_177_residues MKSDQVIALEIATLAELAKLVPETIYGVPDNSRNVIAAQIDVLAHRLTSDQVHDGYMATAPDDMFLALLHASDWAHDLLS PEYDFPPSMEWRDVVKYADGAELVDDRAKAALHAALESYALERSNELSADIRHSLANYDADEPLMNDPELIAASRAAVKR LVDDRARAGLALEGGAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19337; Mature: 19337
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSDQVIALEIATLAELAKLVPETIYGVPDNSRNVIAAQIDVLAHRLTSDQVHDGYMATA CCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCHHCCCEEECC PDDMFLALLHASDWAHDLLSPEYDFPPSMEWRDVVKYADGAELVDDRAKAALHAALESYA CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH LERSNELSADIRHSLANYDADEPLMNDPELIAASRAAVKRLVDDRARAGLALEGGAK HHCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MKSDQVIALEIATLAELAKLVPETIYGVPDNSRNVIAAQIDVLAHRLTSDQVHDGYMATA CCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCHHCCCEEECC PDDMFLALLHASDWAHDLLSPEYDFPPSMEWRDVVKYADGAELVDDRAKAALHAALESYA CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH LERSNELSADIRHSLANYDADEPLMNDPELIAASRAAVKRLVDDRARAGLALEGGAK HHCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA