| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91789590
Identifier: 91789590
GI number: 91789590
Start: 3949317
End: 3950279
Strand: Reverse
Name: 91789590
Synonym: Bpro_3745
Alternate gene names: NA
Gene position: 3950279-3949317 (Counterclockwise)
Preceding gene: 91789591
Following gene: 91789589
Centisome position: 75.96
GC content: 65.42
Gene sequence:
>963_bases ATGAGCACCAATTCCGCTCCTTTTACCCTCATTCCCCGGCTGACGCAAATTGCGATGGCCGTCAAGCCGCAGGGCATGAT TGCCGACCTGGTGTGCCCGCGCATCCCCGTGCCTGGCGAAAAGTTCAACTACACCAAGTTGACGACCGATGAGGCCTTCA CCATCCCCGACGTGCGCGTTGGCCGCACCGGCGCTCCTAACACCGTTGAATTTGGCGGCGTGGACACCACCGACTCGACC GAGGACTACGGCCTGGACGACCCGGTGCCCAACAAAGACATCAAGAACGCTGCCGGCACCAACTACGACCCGCTGGCAGC CGCAGCCGAGCGCACGGCCCTGCTGGTGCAGCTGGCCCGCGAGCAGCGGGTGTCCAACCTGTACTTTGCGCTCAACACCT ACGCAGCCAGCCTGCGCACCACGCTGTCCGGTACCGGCCAGTGGAGCGACTTTGCCAACAGCGACCCGACCGGCGCCATC CTGACCATGTTTGACAGCATGCTGGTGCGCCCGAACGTGGGTGTGGTTGGCCGCGCGGTCTGGACCAAGCTGCGGCAGCA CCCCAAGGTGGTGGCCGCTGTACTGAACCAGAACAACGGCCTGGGTGGCGCATCCGCAGCCGGCGTGATCGCCCGCAAGG CCGTGGCCGACCTGCTGGAGCTGGATGACATCTACGTGGGCGAGAGCTTCTACAACGCCAGCAAAAAGGGCCAGGCTGCC GCCTACAACCGGCTGTGGGGCAAGCACGCAGCGTTCCTGCGCATCGACAAAGCCGTGCGCGACCCGCGCGCCGGCCTGCC GACCTTTGCCTTTACCGCGCAATGGGGCGACGCAGTGGGCGGCACCATCGCCGACTCGAACATCGGCCTGGACGGCGGCC AGCGGGTGCGCGTGGGCGAGCACATCAAAGAGCTGGTGTGCTTCCAGGAGGTGGGTTGCTTCTTCCAGAACGCGGTGGCC TAA
Upstream 100 bases:
>100_bases CTTTGATGATCGAGCCGGGCTCCTTCCAGGGCTAAACGGCGAACTTACCGCCGAGCAGCAACCAGTCACCGACTACACCC ACTGATTTTCAGGAGAACCC
Downstream 100 bases:
>100_bases CCAGACTTGTCTATTGACGAGTTTTGAATGAAGGCGGCGCGCTGATGGCTGCGCCGCCTTTTTTGAACACTCAGCAAACC ACTTTTTAACCAGGAGCAAC
Product: hypothetical protein
Products: NA
Alternate protein names: Phage Capsid Protein; Phage Associated Conserved Protein
Number of amino acids: Translated: 320; Mature: 319
Protein sequence:
>320_residues MSTNSAPFTLIPRLTQIAMAVKPQGMIADLVCPRIPVPGEKFNYTKLTTDEAFTIPDVRVGRTGAPNTVEFGGVDTTDST EDYGLDDPVPNKDIKNAAGTNYDPLAAAAERTALLVQLAREQRVSNLYFALNTYAASLRTTLSGTGQWSDFANSDPTGAI LTMFDSMLVRPNVGVVGRAVWTKLRQHPKVVAAVLNQNNGLGGASAAGVIARKAVADLLELDDIYVGESFYNASKKGQAA AYNRLWGKHAAFLRIDKAVRDPRAGLPTFAFTAQWGDAVGGTIADSNIGLDGGQRVRVGEHIKELVCFQEVGCFFQNAVA
Sequences:
>Translated_320_residues MSTNSAPFTLIPRLTQIAMAVKPQGMIADLVCPRIPVPGEKFNYTKLTTDEAFTIPDVRVGRTGAPNTVEFGGVDTTDST EDYGLDDPVPNKDIKNAAGTNYDPLAAAAERTALLVQLAREQRVSNLYFALNTYAASLRTTLSGTGQWSDFANSDPTGAI LTMFDSMLVRPNVGVVGRAVWTKLRQHPKVVAAVLNQNNGLGGASAAGVIARKAVADLLELDDIYVGESFYNASKKGQAA AYNRLWGKHAAFLRIDKAVRDPRAGLPTFAFTAQWGDAVGGTIADSNIGLDGGQRVRVGEHIKELVCFQEVGCFFQNAVA >Mature_319_residues STNSAPFTLIPRLTQIAMAVKPQGMIADLVCPRIPVPGEKFNYTKLTTDEAFTIPDVRVGRTGAPNTVEFGGVDTTDSTE DYGLDDPVPNKDIKNAAGTNYDPLAAAAERTALLVQLAREQRVSNLYFALNTYAASLRTTLSGTGQWSDFANSDPTGAIL TMFDSMLVRPNVGVVGRAVWTKLRQHPKVVAAVLNQNNGLGGASAAGVIARKAVADLLELDDIYVGESFYNASKKGQAAA YNRLWGKHAAFLRIDKAVRDPRAGLPTFAFTAQWGDAVGGTIADSNIGLDGGQRVRVGEHIKELVCFQEVGCFFQNAVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34239; Mature: 34108
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTNSAPFTLIPRLTQIAMAVKPQGMIADLVCPRIPVPGEKFNYTKLTTDEAFTIPDVRV CCCCCCCEEHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCEEECCCCCEECCCCEE GRTGAPNTVEFGGVDTTDSTEDYGLDDPVPNKDIKNAAGTNYDPLAAAAERTALLVQLAR CCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHH EQRVSNLYFALNTYAASLRTTLSGTGQWSDFANSDPTGAILTMFDSMLVRPNVGVVGRAV HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHH WTKLRQHPKVVAAVLNQNNGLGGASAAGVIARKAVADLLELDDIYVGESFYNASKKGQAA HHHHHHCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECHHHHCCCCCCCHH AYNRLWGKHAAFLRIDKAVRDPRAGLPTFAFTAQWGDAVGGTIADSNIGLDGGQRVRVGE HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCEECCCCCCCCCCCEEHHHH HIKELVCFQEVGCFFQNAVA HHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure STNSAPFTLIPRLTQIAMAVKPQGMIADLVCPRIPVPGEKFNYTKLTTDEAFTIPDVRV CCCCCCEEHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCEEECCCCCEECCCCEE GRTGAPNTVEFGGVDTTDSTEDYGLDDPVPNKDIKNAAGTNYDPLAAAAERTALLVQLAR CCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHH EQRVSNLYFALNTYAASLRTTLSGTGQWSDFANSDPTGAILTMFDSMLVRPNVGVVGRAV HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHH WTKLRQHPKVVAAVLNQNNGLGGASAAGVIARKAVADLLELDDIYVGESFYNASKKGQAA HHHHHHCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECHHHHCCCCCCCHH AYNRLWGKHAAFLRIDKAVRDPRAGLPTFAFTAQWGDAVGGTIADSNIGLDGGQRVRVGE HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCEECCCCCCCCCCCEEHHHH HIKELVCFQEVGCFFQNAVA HHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA