The gene/protein map for NC_007948 is currently unavailable.
Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is ymfP [C]

Identifier: 91789578

GI number: 91789578

Start: 3939048

End: 3940103

Strand: Reverse

Name: ymfP [C]

Synonym: Bpro_3733

Alternate gene names: 91789578

Gene position: 3940103-3939048 (Counterclockwise)

Preceding gene: 91789579

Following gene: 91789577

Centisome position: 75.77

GC content: 65.72

Gene sequence:

>1056_bases
ATGGCATTCACACGCCCGAGTTTGCTGCAGATCATCGAGCGCAACATCGCCGATATCGAGACGCGCCTACCTGGCACCGA
TGCCCGGCTGCGGCGCAGCAACCTCAACGTCATCGCGCGCATGCTGGCCGGTGCCGTGCACGGTCTTTATGGCGTGCTGG
ACTACCTGTCGCGCCAGGTGATCATTGACACGGCCGACGCGGAGTACTTGAGCCGCTGGGCCAGCATCTGGGGCGTAAAC
AGGAAAGCCGCTGCCCGTGCCATCGGGCCGGTGACCTTTACCGGGCTCACGGGCTCGACCGTTCCGGCTGGCACTGTGCT
GAGCCGCGCAGACGGCGCGGAGTTCACCGTGGATGCCGATGCCACTCTGGTGGCCGGCACGGCCACGGGGCAGCTCACGG
CGTCTGTGGCGGGCGCTGCAGGCAATACGGCGGCGGTCAGCGCTCTCACCTTCGTTACCCCGGTTGCGGGCGTCAATACG
GGCGCTGTGGTGGCTGCTGGTGGCTTGGTCAATGGCAGCGACACCGAAGACGACGCCAGCCTGCGAGAGCGCCTGCTGGC
GCGCATCCAGGAGACACCCCAGGGTGGCGCAGATTTTGACTATGTGAACTGGGCCAAGGCAGTGGCCGGCGTTACCGATG
CCTGGTGCTATCCCCAGGAGCTGGGCCCCGGCTCAGTCACGGTCCGGTTCATGCGCTATGACGACACGGTGACCGGCATA
CCCGACGCCGCCGAGGTGGCCGCAGTGCAGGCCTATATTGATGCGCGCCGGCCTGTTACTGCCGCCGTTACGGTGGTGGC
GCCAGTGGCTGTGCCGCTGAACTTCACCATCACGCTCACGCCCAACACGCTCCTCGTCAAGAACGCGGTGCAGGCCGAGC
TGACCGATCTGATCCGGCGCGAGGCTGTGCCAGGCGGCACGCTGTTGCTGAGCCACATCCGCGAGGCCATCAGCCTGGCG
GCCGGTGAAACCAACTATGTGATGACCGTGCCAGCAGCCGACGTGGTGTTGACCACTGGGCAGATAACCACCTTCGGAGC
CATCACATGGCTCTGA

Upstream 100 bases:

>100_bases
GGCTGGCCGGCAAGGCGTTCTGTTGCTGACGGTGGAGATCGTGCGCGCCGGCAAGCCAGTCAATAAATATCAGTTTGAAG
CATTCTGGAAGGGCAATTAA

Downstream 100 bases:

>100_bases
CGGTTTCGCAGTACGTCGCTCACCTGCAGGCACTGCTGCCGCAGGGGCCGGCGTGGTCGCGTGAACCTGACTCGGTCACT
ACCAAGCTGCTGCAGGGCCT

Product: baseplate J-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 351; Mature: 350

Protein sequence:

>351_residues
MAFTRPSLLQIIERNIADIETRLPGTDARLRRSNLNVIARMLAGAVHGLYGVLDYLSRQVIIDTADAEYLSRWASIWGVN
RKAAARAIGPVTFTGLTGSTVPAGTVLSRADGAEFTVDADATLVAGTATGQLTASVAGAAGNTAAVSALTFVTPVAGVNT
GAVVAAGGLVNGSDTEDDASLRERLLARIQETPQGGADFDYVNWAKAVAGVTDAWCYPQELGPGSVTVRFMRYDDTVTGI
PDAAEVAAVQAYIDARRPVTAAVTVVAPVAVPLNFTITLTPNTLLVKNAVQAELTDLIRREAVPGGTLLLSHIREAISLA
AGETNYVMTVPAADVVLTTGQITTFGAITWL

Sequences:

>Translated_351_residues
MAFTRPSLLQIIERNIADIETRLPGTDARLRRSNLNVIARMLAGAVHGLYGVLDYLSRQVIIDTADAEYLSRWASIWGVN
RKAAARAIGPVTFTGLTGSTVPAGTVLSRADGAEFTVDADATLVAGTATGQLTASVAGAAGNTAAVSALTFVTPVAGVNT
GAVVAAGGLVNGSDTEDDASLRERLLARIQETPQGGADFDYVNWAKAVAGVTDAWCYPQELGPGSVTVRFMRYDDTVTGI
PDAAEVAAVQAYIDARRPVTAAVTVVAPVAVPLNFTITLTPNTLLVKNAVQAELTDLIRREAVPGGTLLLSHIREAISLA
AGETNYVMTVPAADVVLTTGQITTFGAITWL
>Mature_350_residues
AFTRPSLLQIIERNIADIETRLPGTDARLRRSNLNVIARMLAGAVHGLYGVLDYLSRQVIIDTADAEYLSRWASIWGVNR
KAAARAIGPVTFTGLTGSTVPAGTVLSRADGAEFTVDADATLVAGTATGQLTASVAGAAGNTAAVSALTFVTPVAGVNTG
AVVAAGGLVNGSDTEDDASLRERLLARIQETPQGGADFDYVNWAKAVAGVTDAWCYPQELGPGSVTVRFMRYDDTVTGIP
DAAEVAAVQAYIDARRPVTAAVTVVAPVAVPLNFTITLTPNTLLVKNAVQAELTDLIRREAVPGGTLLLSHIREAISLAA
GETNYVMTVPAADVVLTTGQITTFGAITWL

Specific function: Unknown

COG id: COG3299

COG function: function code S; Uncharacterized homolog of phage Mu protein gp47

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Mu gp47/PBSX XkdT family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006949 [H]

Pfam domain/function: PF04865 Baseplate_J [H]

EC number: NA

Molecular weight: Translated: 36564; Mature: 36433

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFTRPSLLQIIERNIADIETRLPGTDARLRRSNLNVIARMLAGAVHGLYGVLDYLSRQV
CCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE
IIDTADAEYLSRWASIWGVNRKAAARAIGPVTFTGLTGSTVPAGTVLSRADGAEFTVDAD
EEECCCHHHHHHHHHHHCCCHHHHHHHCCCEEEECCCCCCCCCCHHHCCCCCCEEEECCC
ATLVAGTATGQLTASVAGAAGNTAAVSALTFVTPVAGVNTGAVVAAGGLVNGSDTEDDAS
CEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCHHH
LRERLLARIQETPQGGADFDYVNWAKAVAGVTDAWCYPQELGPGSVTVRFMRYDDTVTGI
HHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHCCCCHHHCCCCCEEEEEEEECCCCCCC
PDAAEVAAVQAYIDARRPVTAAVTVVAPVAVPLNFTITLTPNTLLVKNAVQAELTDLIRR
CCHHHHHHHHHHHHCCCCHHHHEEEEEHEEEEEEEEEEECCCEEEEHHHHHHHHHHHHHH
EAVPGGTLLLSHIREAISLAAGETNYVMTVPAADVVLTTGQITTFGAITWL
HCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEECCCEEECEEEECC
>Mature Secondary Structure 
AFTRPSLLQIIERNIADIETRLPGTDARLRRSNLNVIARMLAGAVHGLYGVLDYLSRQV
CCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE
IIDTADAEYLSRWASIWGVNRKAAARAIGPVTFTGLTGSTVPAGTVLSRADGAEFTVDAD
EEECCCHHHHHHHHHHHCCCHHHHHHHCCCEEEECCCCCCCCCCHHHCCCCCCEEEECCC
ATLVAGTATGQLTASVAGAAGNTAAVSALTFVTPVAGVNTGAVVAAGGLVNGSDTEDDAS
CEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCHHH
LRERLLARIQETPQGGADFDYVNWAKAVAGVTDAWCYPQELGPGSVTVRFMRYDDTVTGI
HHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHCCCCHHHCCCCCEEEEEEEECCCCCCC
PDAAEVAAVQAYIDARRPVTAAVTVVAPVAVPLNFTITLTPNTLLVKNAVQAELTDLIRR
CCHHHHHHHHHHHHCCCCHHHHEEEEEHEEEEEEEEEEECCCEEEEHHHHHHHHHHHHHH
EAVPGGTLLLSHIREAISLAAGETNYVMTVPAADVVLTTGQITTFGAITWL
HCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEECCCEEECEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]