| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is galU [H]
Identifier: 91789569
GI number: 91789569
Start: 3931400
End: 3932299
Strand: Direct
Name: galU [H]
Synonym: Bpro_3723
Alternate gene names: 91789569
Gene position: 3931400-3932299 (Clockwise)
Preceding gene: 91789567
Following gene: 91789595
Centisome position: 75.6
GC content: 61.22
Gene sequence:
>900_bases ATGCCAAAATTCACCTTGAACAAAGCGGTTTTCCCTGTTGCCGGGCTCGGTACCCGCTTTCTGCCCGCCACCAAAGCCCA GCCCAAGGAAATGCTTCCCGTTGTGGACAAGCCGCTCATCCAGTACGCGGTGGAAGAAGCCTATGCGGCGGGTATTCGCC ACATGATTTTTGTGACAGGACGCAATAAACGGGCCATCGAGGATCACTTCGATACCGCCTACGAACTGGAGAACGAACTG GAGGTCGCCCAAAAGCAGGAATTGCTGGCTTTGGTGCGTTCGGTTCAGCCCGACGACATGAATTTTTCCTATGTCCGGCA GCCCCGTTCGCTCGGCCTCGGCCATGCAGTGCTGTGCGCCGAACACCTGGTGGGCGACGAGCCTTTTGCCGTGCTGCTGG CGGATGACCTGATGGTGGGTCCGCCGGGCGGTCTGCCAGTCCTGGCCCAGATGGCCGCGCAGTACCAGGAGCTTCACCAG TCGGTGCTGGCCGTGCAGGAGGTGCCCCTGGCGCACACGCGCCGCTATGGCATCGTGGCCGCAGAAGCCATCAGCCCGGG GGCAAATCCGAGGCTCATGAAGGTGCAGAAAATCGTGGAAAAACCGGCACCGGAGGTGGCCCCGTCCCGCATGGGCGTGG CCGGCCGCTACATTCTCACGCCCGCCATTTTTGAACATATCCGCCGCCAGGCGAGCGGTGTGGGGGGCGAAATTCAGTTG ACTGACGGCATCTCAAGCCTGCTGGCCGAGGAAGCCGTTTATGCCCTGCAATACCAGGGCAAGCGTTACGACTGCGGCAG CAAGGAAGGGTTCCTGGAAGCCACCGTTGAGCTGGCGCTGCAACACCCGGAAGTGGGGCAACACTTTCGCCAATACCTCA GCGGGCTCAAGCTCGACTGA
Upstream 100 bases:
>100_bases TGTTCATTGCGTGGTTTGCGCACGCCGACTCGGGATGTCGTCCGACGTCGTGCGCTTTACCTGAGCCGCAACACTTGAGT TTTTTCACCTATCAAAGTCG
Downstream 100 bases:
>100_bases CGGCCGGACCGCGGGAGAAACCCGGGCAGGCAGCGGCGAACTTCAGGGGGCGAATTTCAGGGGCGAACCTCAGCGCCGTT TCAGCACGTGAATGAAGTCG
Product: UDP-glucose pyrophosphorylase
Products: NA
Alternate protein names: Alpha-D-glucosyl-1-phosphate uridylyltransferase; UDP-glucose pyrophosphorylase; UDPGP; Uridine diphosphoglucose pyrophosphorylase [H]
Number of amino acids: Translated: 299; Mature: 298
Protein sequence:
>299_residues MPKFTLNKAVFPVAGLGTRFLPATKAQPKEMLPVVDKPLIQYAVEEAYAAGIRHMIFVTGRNKRAIEDHFDTAYELENEL EVAQKQELLALVRSVQPDDMNFSYVRQPRSLGLGHAVLCAEHLVGDEPFAVLLADDLMVGPPGGLPVLAQMAAQYQELHQ SVLAVQEVPLAHTRRYGIVAAEAISPGANPRLMKVQKIVEKPAPEVAPSRMGVAGRYILTPAIFEHIRRQASGVGGEIQL TDGISSLLAEEAVYALQYQGKRYDCGSKEGFLEATVELALQHPEVGQHFRQYLSGLKLD
Sequences:
>Translated_299_residues MPKFTLNKAVFPVAGLGTRFLPATKAQPKEMLPVVDKPLIQYAVEEAYAAGIRHMIFVTGRNKRAIEDHFDTAYELENEL EVAQKQELLALVRSVQPDDMNFSYVRQPRSLGLGHAVLCAEHLVGDEPFAVLLADDLMVGPPGGLPVLAQMAAQYQELHQ SVLAVQEVPLAHTRRYGIVAAEAISPGANPRLMKVQKIVEKPAPEVAPSRMGVAGRYILTPAIFEHIRRQASGVGGEIQL TDGISSLLAEEAVYALQYQGKRYDCGSKEGFLEATVELALQHPEVGQHFRQYLSGLKLD >Mature_298_residues PKFTLNKAVFPVAGLGTRFLPATKAQPKEMLPVVDKPLIQYAVEEAYAAGIRHMIFVTGRNKRAIEDHFDTAYELENELE VAQKQELLALVRSVQPDDMNFSYVRQPRSLGLGHAVLCAEHLVGDEPFAVLLADDLMVGPPGGLPVLAQMAAQYQELHQS VLAVQEVPLAHTRRYGIVAAEAISPGANPRLMKVQKIVEKPAPEVAPSRMGVAGRYILTPAIFEHIRRQASGVGGEIQLT DGISSLLAEEAVYALQYQGKRYDCGSKEGFLEATVELALQHPEVGQHFRQYLSGLKLD
Specific function: May play a role in stationary phase survival [H]
COG id: COG1210
COG function: function code M; UDP-glucose pyrophosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDPGP type 2 family [H]
Homologues:
Organism=Homo sapiens, GI11761621, Length=268, Percent_Identity=26.865671641791, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI11761619, Length=268, Percent_Identity=26.865671641791, Blast_Score=73, Evalue=4e-13, Organism=Escherichia coli, GI1787488, Length=292, Percent_Identity=45.5479452054795, Blast_Score=241, Evalue=4e-65, Organism=Escherichia coli, GI1788355, Length=293, Percent_Identity=40.9556313993174, Blast_Score=213, Evalue=1e-56, Organism=Escherichia coli, GI1788351, Length=277, Percent_Identity=24.9097472924188, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1790224, Length=277, Percent_Identity=23.4657039711191, Blast_Score=69, Evalue=4e-13,
Paralogues:
None
Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 260 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005771 - InterPro: IPR005835 [H]
Pfam domain/function: PF00483 NTP_transferase [H]
EC number: =2.7.7.9 [H]
Molecular weight: Translated: 32802; Mature: 32671
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKFTLNKAVFPVAGLGTRFLPATKAQPKEMLPVVDKPLIQYAVEEAYAAGIRHMIFVTG CCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHCCEEEEEEEC RNKRAIEDHFDTAYELENELEVAQKQELLALVRSVQPDDMNFSYVRQPRSLGLGHAVLCA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCHHHCCCCHHHHHH EHLVGDEPFAVLLADDLMVGPPGGLPVLAQMAAQYQELHQSVLAVQEVPLAHTRRYGIVA HHHCCCCCEEEEEECCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCEEE AEAISPGANPRLMKVQKIVEKPAPEVAPSRMGVAGRYILTPAIFEHIRRQASGVGGEIQL ECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEE TDGISSLLAEEAVYALQYQGKRYDCGSKEGFLEATVELALQHPEVGQHFRQYLSGLKLD HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCC >Mature Secondary Structure PKFTLNKAVFPVAGLGTRFLPATKAQPKEMLPVVDKPLIQYAVEEAYAAGIRHMIFVTG CCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHCCEEEEEEEC RNKRAIEDHFDTAYELENELEVAQKQELLALVRSVQPDDMNFSYVRQPRSLGLGHAVLCA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCHHHCCCCHHHHHH EHLVGDEPFAVLLADDLMVGPPGGLPVLAQMAAQYQELHQSVLAVQEVPLAHTRRYGIVA HHHCCCCCEEEEEECCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCEEE AEAISPGANPRLMKVQKIVEKPAPEVAPSRMGVAGRYILTPAIFEHIRRQASGVGGEIQL ECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEE TDGISSLLAEEAVYALQYQGKRYDCGSKEGFLEATVELALQHPEVGQHFRQYLSGLKLD HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA