| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91789546
Identifier: 91789546
GI number: 91789546
Start: 3910267
End: 3911019
Strand: Direct
Name: 91789546
Synonym: Bpro_3700
Alternate gene names: NA
Gene position: 3910267-3911019 (Clockwise)
Preceding gene: 91789545
Following gene: 91789547
Centisome position: 75.19
GC content: 66.93
Gene sequence:
>753_bases ATGAGGTACACCCACCCTGAACTGCTGGAACACCTCGCCTCGTCTTATGTGCTGGGCACGCTGGCGGGCGGCGCACGGCG CCGCTTTGAACGCCTGCAGCGCGACCGCGCCGATGTGCGGATGCTGGTGACGCAGTGGGAAACGCGGCTGGGCCAGCTGG CCATGTCAGTGCCGGCCCAGCGGCCTTCGCCGCAGCTGTGGGCCGCAATTGCCGCACGTACGCAACCCGGCAGGGCACCC GCTGCACCGCCTGCCGCTTCCCCTTCGGCCTCCTGGCTGGGCTGGCTCAAGCCGGCAGGCTTTGGCCTGGGTGGCCTGGC GGCCGGGGTGATCGCGGCCAGCGCGCTGTTTGCAGCCATGCCCTCGCTTTTCATGTCCAGCGACCAGATCGCCATGCGAT CGGGTGAAAAACTGCCGCAAAGCTATGTGGGCCTGCTCACCGATGCGCAGGGCAACGGCAAGCTGCTGGTGAGCTCGCTG CGTCACGGCAAGACCATGACGGTCAAGGTGATAGGCCCCATCACACCGCCCGCTGCCGGAACGCTGGTGCTGTGGGCCGT GCCCGCCAATGCGCCGGCCTTTGCGCTTGGCACCGTGCCCACCAGCGGTTCGGCCGTTTCCATGTTGTCCGACACGTCGG AAAATCTGCTGTCCAAAGTGGGCAAGCTGATGGTGACGCTTGAGGCCAGCGCAGCGCCTGCCGTTCCTGGCGGGACCGTG GTCTTCAGCGGCAATTGCGCGAAGTTGTGGTGA
Upstream 100 bases:
>100_bases TGGCGGCGCAAATGGGCGCGCCGCTCGGCTCCGTCAAAGCCTGGATACGGCGCGGGCTGGAAAAACTCAGAGGCTGCCTG GCCGCGCAGGGGGTGACGCC
Downstream 100 bases:
>100_bases TCAAGACCGAGCCGCAAGACTGGATTTGGGATGCTGGCACCACGGGCCAACATCGCGTCTATCGTTGCCAATCATGTGAA ACCTTAACCCATACACCAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 250; Mature: 250
Protein sequence:
>250_residues MRYTHPELLEHLASSYVLGTLAGGARRRFERLQRDRADVRMLVTQWETRLGQLAMSVPAQRPSPQLWAAIAARTQPGRAP AAPPAASPSASWLGWLKPAGFGLGGLAAGVIAASALFAAMPSLFMSSDQIAMRSGEKLPQSYVGLLTDAQGNGKLLVSSL RHGKTMTVKVIGPITPPAAGTLVLWAVPANAPAFALGTVPTSGSAVSMLSDTSENLLSKVGKLMVTLEASAAPAVPGGTV VFSGNCAKLW
Sequences:
>Translated_250_residues MRYTHPELLEHLASSYVLGTLAGGARRRFERLQRDRADVRMLVTQWETRLGQLAMSVPAQRPSPQLWAAIAARTQPGRAP AAPPAASPSASWLGWLKPAGFGLGGLAAGVIAASALFAAMPSLFMSSDQIAMRSGEKLPQSYVGLLTDAQGNGKLLVSSL RHGKTMTVKVIGPITPPAAGTLVLWAVPANAPAFALGTVPTSGSAVSMLSDTSENLLSKVGKLMVTLEASAAPAVPGGTV VFSGNCAKLW >Mature_250_residues MRYTHPELLEHLASSYVLGTLAGGARRRFERLQRDRADVRMLVTQWETRLGQLAMSVPAQRPSPQLWAAIAARTQPGRAP AAPPAASPSASWLGWLKPAGFGLGGLAAGVIAASALFAAMPSLFMSSDQIAMRSGEKLPQSYVGLLTDAQGNGKLLVSSL RHGKTMTVKVIGPITPPAAGTLVLWAVPANAPAFALGTVPTSGSAVSMLSDTSENLLSKVGKLMVTLEASAAPAVPGGTV VFSGNCAKLW
Specific function: Unknown
COG id: COG5343
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25965; Mature: 25965
Theoretical pI: Translated: 11.00; Mature: 11.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYTHPELLEHLASSYVLGTLAGGARRRFERLQRDRADVRMLVTQWETRLGQLAMSVPAQ CCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC RPSPQLWAAIAARTQPGRAPAAPPAASPSASWLGWLKPAGFGLGGLAAGVIAASALFAAM CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH PSLFMSSDQIAMRSGEKLPQSYVGLLTDAQGNGKLLVSSLRHGKTMTVKVIGPITPPAAG HHHHHCCCHHHHHCCCCCCHHHHHHEECCCCCCCEEEEEHHCCCEEEEEEEECCCCCCCC TLVLWAVPANAPAFALGTVPTSGSAVSMLSDTSENLLSKVGKLMVTLEASAAPAVPGGTV EEEEEEECCCCCEEEEECCCCCCCCHHHHHCCHHHHHHHHHHEEEEEECCCCCCCCCCEE VFSGNCAKLW EECCCCCCCC >Mature Secondary Structure MRYTHPELLEHLASSYVLGTLAGGARRRFERLQRDRADVRMLVTQWETRLGQLAMSVPAQ CCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC RPSPQLWAAIAARTQPGRAPAAPPAASPSASWLGWLKPAGFGLGGLAAGVIAASALFAAM CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH PSLFMSSDQIAMRSGEKLPQSYVGLLTDAQGNGKLLVSSLRHGKTMTVKVIGPITPPAAG HHHHHCCCHHHHHCCCCCCHHHHHHEECCCCCCCEEEEEHHCCCEEEEEEEECCCCCCCC TLVLWAVPANAPAFALGTVPTSGSAVSMLSDTSENLLSKVGKLMVTLEASAAPAVPGGTV EEEEEEECCCCCEEEEECCCCCCCCHHHHHCCHHHHHHHHHHEEEEEECCCCCCCCCCEE VFSGNCAKLW EECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA