Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is vanA [H]

Identifier: 91789528

GI number: 91789528

Start: 3893342

End: 3894382

Strand: Reverse

Name: vanA [H]

Synonym: Bpro_3681

Alternate gene names: 91789528

Gene position: 3894382-3893342 (Counterclockwise)

Preceding gene: 91789529

Following gene: 91789527

Centisome position: 74.89

GC content: 63.5

Gene sequence:

>1041_bases
ATGAACACCATCACTTTCACCAAAGACCCCGTCGACGCGCTGCTGAAGGACGGCCTGAAGAATCTCTGGTATCCCATCTG
CCCGTCGGGCTTTGTCGGCGAGCGGCCGATTTCACTCCGTCGGCTGGGCAAGAAGATTGCCCTGTGGCGCGATGCAGCCG
GCACGCTGCATGCGCTGGAAGACCACTGCCCGCACCGCGGCGCGCCGCTGTCGCAGGGCATGGTGCTGGGTGACCGGCTC
GCCTGCCCCTACCACGGTGTCGAAGTGCGTTGCGACGGCACCGTGACCAAAGTGCCGGGAAGCCCGGGCTGCAAGCTCGA
AGGCACGCGCGCGGCGCTGTCTTTCCATGTGCAGGAAGCGTGGGGCGCCATCTTCCTCTACAACAGCGATGTGAACATCG
ACACGCCGCCGCCCATGACCATGCCCGAAGAGCTCAACTCGCCGGAGTATTCGCACTTCCTGTGCTATGCCGAGTGGAAG
GGCGACTACCGCTATGCGCTCGACAATGTGATGGATCCGATGCACGGCACCTTCCTGCACAAGCAGTCCCATTCCATGGC
CGAAGGCGAGAGCACGGCCACGTTCCAGATCCGCACGACCGACACGGGCTTTGTGTTTGAAAAGACCGGCCAGCGCGGCG
TCAACTTCGACTGGACGGAATGGGGCAGCACCGGTGTGCACTGGATGCGGCTGGAAATTCCCTATCCGAAGTCCGGTGGC
CCTGGCGGCAATTTTGCGATCGTTGGCTGTGCCACGCCGGTTGATGGCAACACGACAGCGGTGTTCTTCTGGCGTTGCCG
CAAGGTGTCGTCCTGGCAGCGTGACACCTGGAGGTTTTTGTATCGCAACCGGCTGGAGGCGCGCCACTGGGCAGTGCTTG
AGCAGGACCGCATCATGCTGGAGCAAATGGAACCCGACGCGAACCAGCACGAAAACCTGTACCAGCATGACATCGGCGTG
GTGCGGCTGCGCCGCCACCTGCGCAACCTGGCCGAAGAGCAGCTGGAGGCTGCGGCGGCCAAGGCCGGCAACCCGGCCTG
A

Upstream 100 bases:

>100_bases
CCGTACCGGTCCGTCCAGCGAGAACGGGCAGCCATGGACCGAGTCGGGCTTCCAGGCCCTGATGGCCCGCCTTGGCAACT
AAGGAAAGAGGAGAGAGACC

Downstream 100 bases:

>100_bases
TTCACATTTGAGCACCCTTTGAGCCCGTCATGGAGCCATCATGTCCACTACCCTGAACGCCTTCGTCCACACGTTGCGCC
ATGAAGCCGACGATGTGATC

Product: Rieske (2Fe-2S) domain-containing protein

Products: NA

Alternate protein names: 4-hydroxy-3-methoxybenzoate demethylase [H]

Number of amino acids: Translated: 346; Mature: 346

Protein sequence:

>346_residues
MNTITFTKDPVDALLKDGLKNLWYPICPSGFVGERPISLRRLGKKIALWRDAAGTLHALEDHCPHRGAPLSQGMVLGDRL
ACPYHGVEVRCDGTVTKVPGSPGCKLEGTRAALSFHVQEAWGAIFLYNSDVNIDTPPPMTMPEELNSPEYSHFLCYAEWK
GDYRYALDNVMDPMHGTFLHKQSHSMAEGESTATFQIRTTDTGFVFEKTGQRGVNFDWTEWGSTGVHWMRLEIPYPKSGG
PGGNFAIVGCATPVDGNTTAVFFWRCRKVSSWQRDTWRFLYRNRLEARHWAVLEQDRIMLEQMEPDANQHENLYQHDIGV
VRLRRHLRNLAEEQLEAAAAKAGNPA

Sequences:

>Translated_346_residues
MNTITFTKDPVDALLKDGLKNLWYPICPSGFVGERPISLRRLGKKIALWRDAAGTLHALEDHCPHRGAPLSQGMVLGDRL
ACPYHGVEVRCDGTVTKVPGSPGCKLEGTRAALSFHVQEAWGAIFLYNSDVNIDTPPPMTMPEELNSPEYSHFLCYAEWK
GDYRYALDNVMDPMHGTFLHKQSHSMAEGESTATFQIRTTDTGFVFEKTGQRGVNFDWTEWGSTGVHWMRLEIPYPKSGG
PGGNFAIVGCATPVDGNTTAVFFWRCRKVSSWQRDTWRFLYRNRLEARHWAVLEQDRIMLEQMEPDANQHENLYQHDIGV
VRLRRHLRNLAEEQLEAAAAKAGNPA
>Mature_346_residues
MNTITFTKDPVDALLKDGLKNLWYPICPSGFVGERPISLRRLGKKIALWRDAAGTLHALEDHCPHRGAPLSQGMVLGDRL
ACPYHGVEVRCDGTVTKVPGSPGCKLEGTRAALSFHVQEAWGAIFLYNSDVNIDTPPPMTMPEELNSPEYSHFLCYAEWK
GDYRYALDNVMDPMHGTFLHKQSHSMAEGESTATFQIRTTDTGFVFEKTGQRGVNFDWTEWGSTGVHWMRLEIPYPKSGG
PGGNFAIVGCATPVDGNTTAVFFWRCRKVSSWQRDTWRFLYRNRLEARHWAVLEQDRIMLEQMEPDANQHENLYQHDIGV
VRLRRHLRNLAEEQLEAAAAKAGNPA

Specific function: Unknown

COG id: COG4638

COG function: function code PR; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR015881 [H]

Pfam domain/function: PF00355 Rieske [H]

EC number: =1.14.13.82 [H]

Molecular weight: Translated: 39046; Mature: 39046

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTITFTKDPVDALLKDGLKNLWYPICPSGFVGERPISLRRLGKKIALWRDAAGTLHALE
CCCEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCHHHEEEECCCCHHHHHH
DHCPHRGAPLSQGMVLGDRLACPYHGVEVRCDGTVTKVPGSPGCKLEGTRAALSFHVQEA
HCCCCCCCCCCCCEEECCCCCCCCCCEEEEECCEEEECCCCCCCEECCCCEEEEEEEEHH
WGAIFLYNSDVNIDTPPPMTMPEELNSPEYSHFLCYAEWKGDYRYALDNVMDPMHGTFLH
CCEEEEEECCCCCCCCCCCCCHHHCCCCCCCEEEEEEEECCCHHHHHHHHCCCHHHHEEE
KQSHSMAEGESTATFQIRTTDTGFVFEKTGQRGVNFDWTEWGSTGVHWMRLEIPYPKSGG
CCCCCCCCCCCEEEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCC
PGGNFAIVGCATPVDGNTTAVFFWRCRKVSSWQRDTWRFLYRNRLEARHWAVLEQDRIML
CCCCEEEEEECCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH
EQMEPDANQHENLYQHDIGVVRLRRHLRNLAEEQLEAAAAKAGNPA
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNTITFTKDPVDALLKDGLKNLWYPICPSGFVGERPISLRRLGKKIALWRDAAGTLHALE
CCCEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCHHHEEEECCCCHHHHHH
DHCPHRGAPLSQGMVLGDRLACPYHGVEVRCDGTVTKVPGSPGCKLEGTRAALSFHVQEA
HCCCCCCCCCCCCEEECCCCCCCCCCEEEEECCEEEECCCCCCCEECCCCEEEEEEEEHH
WGAIFLYNSDVNIDTPPPMTMPEELNSPEYSHFLCYAEWKGDYRYALDNVMDPMHGTFLH
CCEEEEEECCCCCCCCCCCCCHHHCCCCCCCEEEEEEEECCCHHHHHHHHCCCHHHHEEE
KQSHSMAEGESTATFQIRTTDTGFVFEKTGQRGVNFDWTEWGSTGVHWMRLEIPYPKSGG
CCCCCCCCCCCEEEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCC
PGGNFAIVGCATPVDGNTTAVFFWRCRKVSSWQRDTWRFLYRNRLEARHWAVLEQDRIML
CCCCEEEEEECCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH
EQMEPDANQHENLYQHDIGVVRLRRHLRNLAEEQLEAAAAKAGNPA
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9098058 [H]